Cyprinus carpio (common carp): 109099419
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Entry
109099419 CDS
T05134
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
ccar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109099419 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
109099419 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109099419 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109099419 (gtf2h1)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109099419 (gtf2h1)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109099419 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
109099419
NCBI-ProteinID:
XP_042608888
Ensembl:
ENSCCRG00000018846
UniProt:
A0A8C1NI17
LinkDB
All DBs
Position
B25:complement(3953445..3962947)
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLILHTGESTTFHFSNGSTALKDRDATKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNTVEHSLSNNSKQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPTVKQKYAENVPHNLTEKEFWTRFFQSHYFHRDRISTGQQ
DIFSECAKQDEKGLKSMVTQGVKNPMVDLLLLEDKTLDEGYGTATVPTTSNSSNKSLREN
SNSAIIKRFNHHSAMVLAAGLRKADAPSDQASETSSTDGNSRDSDFFQLPLKKVKLQESI
EYDDLQGDSGRKTIALNLKKSDRYSHGPIPLQSQHYTTSQDIINSISIIQHEMRNYKPRL
TQVMSSNAASSAITALSPGGLLMQGGGQQTINQLVPTDVQIELKHLYTAAGELLRHFWSC
FPVNTPFLEDKVVKMKSNLERFQVTKLRPFQEKIQRQYLSMTLMGHLEEMLQAAYSKFQV
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtccgaagaggtgttgttggtggtgaagagggtccgtcagaggaagcag
gacgggactctgtacctgatggccgagcggatcgcctggggtccggaagggaaggaccgc
ttcaccgtcagccacctgtacgccgacatccgctgtcagaagatcagtcctgatgggaag
gcaaagatccagcttcagctgattctgcacacgggagaaagcaccacctttcatttctcc
aatgggagcacagcactgaaggacagagacgccaccaaagaactgctccagcagctcctg
cccaagttcaagaagaaagccaataaagagctggaggagaagaaccggatgttgcaggaa
gaccctgttctcttccagctctataaggacttagtggtgagtcaggtgatcagtgctgag
gagttctgggccaatcggctgagcctgaatactgtggaacactccctctccaacaacagc
aaacaggaagtgggcatttctgctgccttcctggccgacatcagaccacagacagatggc
tgcaacggcctgcgctacaatctgacctctgacatcatcgagtcaatcttcagaacctac
cctacagtcaagcagaaatacgctgagaacgttcctcacaacttgacggagaaggagttc
tggacgcggttctttcagtctcattacttccacagagaccggatcagcacaggccagcag
gacatcttctcagagtgtgccaaacaggacgagaagggcctgaaatcaatggtgacccag
ggagtgaagaaccccatggtggatctgcttttactcgaggataaaacattagatgagggt
tacggcacagcaacagttcccactacatcaaactcatccaacaaatcactgagagagaac
agcaactctgccataatcaaacgcttcaaccaccacagtgccatggtgctggcggccggc
ctacgcaaagcggacgctcccagcgatcaagccagtgagaccagcagcactgatgggaac
tccagagattcagatttcttccagctgccactcaaaaaggtaaaattacaagaatccata
gagtatgatgaccttcagggtgactctgggcgtaagaccatcgctctgaacctgaagaaa
tcagacaggtattcccacggcccgattcctcttcagtcacagcattacaccaccagtcaa
gacattatcaactccatcagcattatccagcacgagatgaggaactataaaccccgtctg
acgcaggtgatgtccagcaatgcggcgagctccgccatcacagcgctgtcacctggaggg
cttctgatgcagggaggaggccaacagaccataaaccaattagtgccaactgatgttcag
attgagctgaagcacttatatacagctgccggggagctgctccgacatttctggtcctgt
ttccccgtcaacactcccttcctggaggataaggtggtaaagatgaaatctaacctggag
agattccaggtgacgaagctccgcccctttcaagaaaagatccaacggcagtatttgagc
atgactctaatgggccacctagaggaaatgcttcaggctgcgtacagcaagttccaagtc
tggcaaacacgccgaatgatgagaaaaacctga
DBGET
integrated database retrieval system
