Cyprinus carpio (common carp): 109099476
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Entry
109099476 CDS
T05134
Name
(RefSeq) transcription factor RelB homolog
KO
K09253
transcription factor RelB
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109099476
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109099476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109099476
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109099476
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
109099476
NCBI-ProteinID:
XP_018968539
Ensembl:
ENSCCRG00000016319
UniProt:
A0A8C1QWJ9
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Position
A15:12561752..12570772
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AA seq
593 aa
AA seq
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MRNMSVRNGTAGDLYLDIIDEYLTEKTIKERTVMLPGPPPPPVDQDIQPVDPPSRSRRST
PVLVSRGAAPHSPYILDQTPTAHTDRMAPMHSMRGQKVPSQRRGQSSAAQQRLHPPQTGT
EHLERFLEKPVLVVVEQPKERGMRFRYECEGRSAGSILGTSSTDSSKTLPAIEIQGPIDN
IKKVMVTVSLVTKDIPHRPHPHCLVGKDCADGICVIHINPHSTRRHSFANLGIQCVRRKE
LDASLQKRRNKNIDPFNTGHSKSIEDMDMNVVRLCFQCELERKDGERIPLAPVVSNPIYD
KKATTTAELKINRLNVVRGPCTGKTEIYMLCDKVQKDDIEIIFCKDDWEAKAEFAQTDVH
RQIAIVFKSPPFREQNITEEVEVSVCLRRMSDRMDSEPVNFTYVPDNADPYGVNRKRKMK
SDVKFSEPCSAPQNQDTVNELGMPQHFENPFYTSPDFNIPNASMAVPVMDGGVHMPSQVM
EKIHYNDDFKQEDGCISMDLDTLDTVFQSISQCLAQQGSDQLLNQLLFPGDLSFGLDGTD
TKLNVNQPMMNMSSINDVHFSQMVNESQVYPTDLENIEGLIFSTVKNENDLDH
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacatgagcgttcggaacggcacagcgggagacctttatctagatattatagac
gagtacctcacggagaaaacgatcaaagaacggaccgtgatgctccctggtcctcctcct
ccacctgtggaccaggacatccagccggttgatcctccgtctagaagcaggagaagcacc
ccagtgctggtctccagaggagcagctccacatagcccatacatccttgaccagacccca
acggcgcacactgatcgtatggcacccatgcattccatgcgaggccaaaaagtgccatct
cagcgacgtggacagtcatctgcagcgcaacagagacttcatcctccgcagactggaaca
gaacatctggagcgcttcctggaaaagccagtgctggtggtggtggagcagccgaaggag
cgtggcatgcgatttcgctatgagtgtgagggacgatccgcgggcagcatacttggaacc
tccagcactgactccagcaagacgctgcctgccattgaaattcaaggccccattgataat
atcaagaaagtgatggtcaccgtgtctcttgtgacaaaggacatcccacaccgcccacat
ccacactgcttggtcgggaaagactgtgcagatggcatctgtgtcatccacatcaatccc
cacagcactcgtcgacacagctttgcgaatctgggcatccagtgtgtgcggaggaaggaa
cttgatgcctcacttcagaagaggaggaataagaatattgatccgtttaacacgggccac
tctaagagcattgaggacatggacatgaacgtggtgagactgtgtttccagtgtgagctg
gaacgaaaggacggagagcgaattcccctcgcacctgtggtttccaaccccatttatgac
aagaaggcgaccacaacagcagagctgaagatcaatcggcttaatgttgtcagaggcccc
tgcacaggaaagactgaaatttacatgctctgtgacaaagtgcagaaagatgacattgag
ataatcttctgcaaggacgactgggaggccaaggcggagtttgctcagactgatgtccat
cgacaaatcgccatcgtcttcaagtccccgcccttcagggagcagaatataaccgaggag
gtggaggtcagcgtgtgtctacgccgcatgtctgaccggatggacagcgagccagtcaat
ttcacatatgttccagacaacgcagatccttacggagtcaaccgcaagaggaaaatgaaa
tctgatgtgaagttcagcgagccatgcagcgctcctcaaaatcaagacactgtgaacgaa
ctcggcatgccacagcattttgaaaacccattctacacctctcccgattttaacattccc
aatgcttccatggcagtccctgttatggacggaggcgtccacatgccatcccaggttatg
gagaaaattcattacaatgacgacttcaaacaagaggatggttgtattagcatggaccta
gacactttagatactgtcttccaaagcatttcccaatgcttggcccagcaaggttcagac
cagcttctaaatcagttgttgtttcctggcgatctcagctttgggttagacggcacagat
acgaaattgaacgtcaatcaaccgatgatgaacatgtcgtctataaacgacgtgcacttc
agtcagatggtgaatgagagtcaggtctatccaacagatctggagaacatcgaaggcctc
attttctccactgtgaagaacgagaatgacctggaccactga
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