Cyprinus carpio (common carp): 109099900
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Entry
109099900 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 2-like
KO
K06233
low density lipoprotein-related protein 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109099900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109099900
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109099900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
FAM196
EGF_CA
cEGF
DUF5050
EGF
Motif
Other DBs
NCBI-GeneID:
109099900
NCBI-ProteinID:
XP_018968922
LinkDB
All DBs
Position
24:complement(5355015..5387043)
Genome browser
AA seq
2663 aa
AA seq
DB search
MEITALNGSTTLQMHWMMFLTEDFMDLTGYQERKTFQRIVELDFKLQEDKLQPLMKRLCP
VEESPFPPLTYPQETIGSTPKRKSKAEAKKHARWKLWTLFWTDRGSDSGVPPKVASADMD
GGNLRNLYTDNLGNVEFIAADIEARKIYWGVPQSGMIECGTMDGVSRVTIVSGLSHPCGI
TVYQNYLYYTDLDYEVIERVDKNTGADMVVMRSGMAGVQALKVHARDNSAGTTNACSTDN
GGCPHLCLPKPDGQKTCACTTGFIPSQDGSHCEQYDSYAIVSSSKFIRGFHINSSDHSEA
MVPVGANTYSVLSKLDMHIASGFLYWTDNSTYSSYRGIYRTKTDGSRYSTVISQLGTGRI
QGLAVDWIAGNLYFTNAYTSQTYLEVLRLNTSIQLILLKSSVDRPLDLAVSPKLRLLFWT
DAGQSPKIESALLDGTNQTVLASESLSSPRGLTVDYTNDLLYWVDDTLDMISRMASDGSQ
RQIVRYGSRYPAPYSVAIFGEYMLWVDRKLGKLFQASKSPGNTDTPEVIRDGIEELTDIG
VFDSHVQPTSANLVGFNPCQEDNGRCQQFCLQGLSSNSPNVPVPMVLCSAMVSHVALAWM
THFLPTLRWVFNPYCQEDNGRCQQFVLSRPEQQQPKCACAHGSLLSNGVSCGFGLDEYLI
FTTDYTVNSMRLDPEDHSTPFPTFTLGYGVLATEFDFQDKRVFFTQYVGLGRSKIGYILT
TSSTSPPITIASDLDDPEGLAYDWTHKRLYFTDYYNRSVQSMGIDGQNRSFIAHGDRPRA
IVVDPCYGYLYWTDWGSPAKIERATLGGNFRIPIVNTSLSQPNALSLDYEERLLYWADAT
LDKIERASLTGENREIILSQTQYPFSVTVFQQDIYWTDWNTRIVYRANKDDGSGLTIMAT
DLQYRPNDIHVFSASRQESCSSPCQLFNGGCSHVCVPGPTGPECQCPSSGNWYLANNGKD
CIPDDGQRCHADQFTCLDGSCLSQHWKCDGYRDCMDGSDELERVCAFHTCSPTEFTCDNG
GCVPLYYVCDYTNDCGDNSDEHGCPFPTCNPTTEFTCVNGRCISAAFVCDGINDCRDNGT
TDEVNCPDRTCAPGLVKCDTTNICISSSSLCDGFNNCGDNSDENPLFCAGRTCSANEFRC
DNGKCIPQSWVCDRIPDCLDGTDEPPTCEDQVRTCNPQQFSCANGHCILATWVCDGSNDC
GDNSDEAQELQCGSRTCNPSDFTCPTWYPGSPRCIPWSYVCDGEKDCTDAADELHNCPNR
TCHMNEFACANGRCILVPFHCDRVNDCGDGSDEIGCVYRTCSSQEFTCQNGVCIPSAYVC
DGYIDCQDGSDELEGLCRSPEPTCAPGEFMCNSGECIDIHKVCNHQRDCSDNSDEKGCGI
NECSNPAIHQCAQNCVDTQTGYYCSCRDGYKLMPDGKACEDIDECKEEPGVCSQVCENAV
GSFYCKCAPGYLREPDGHTCRQNSGIAPYLLYSNRYYIRNLTADGSSSSVVLQGLSNVVA
LDFDTTEKRLYWVDIGSQHIERMYLDGTGREVILKSDLDGAEGLAVDWVGRKLYWADVTM
EAIHVSELDGRYRKKLLKGCVDTNSTYCFTNPRAVAVNPKYGWLYWTDWGRTAFIGRAGM
DGTNTSAIITTKLVWPHALTIDYTNNKIFFADAHLNFLDYADMDGQNRHRAITGSMPHAF
ALTLFEDLVYWTDWNTHTIERAHKYTGANRVVMGNNTHRPNDIHIYHPYRQPRSDNPCND
HYLTCSHLCLIGPGGTTARCACPDHFIGLAIGFKIQCVADCSSTQFRCGDNEKCIPIWWK
CDGQSDCGDGSDEPQTCSPRYCPIGRFQCQDGNCTYPFFLCDGHNDCPDGSDEDAALCSD
HRCSENQFQCKNKRCIPVSWHCDGVQDCADGSDEEADSCAEKTCKPGQFQCKNGLCIPPS
YVCDAQNDCGDQSDEPYDECMGPDHKCDADTEFSCDTNYRCIPLWAVCDGTNDCLDNSDE
QSCHELTCDPLGDFRCDNHRCVPVRWHCDGNNDCGDGSDERNCVPRPCXDNQQCIPGSWV
CDHDNDCGDNSDERDCELRTCSPGTFQCTSGHCIPEALKCDGFADCLDYSDESTCPTRYP
GGRWCPSNQFQCNNKLCVNQQWVCDGFNDCGDRSDEQLSLCWNITCEMPAKFRCDNGYCI
YSGLMCNQKDDCGDGSDEKEDSCQEPTLAPCTPNEFKCTNGHCVTLPYVCDHNDNCGDLT
DELGCNFGHDRNCDEKLCQHECTNLNGTGFICSCKPGYAVDPDNTFRCNDIDECSEYGTC
PQACKNTKGSYDCDCALGYRKVGTGNQCEAEGPGPLLLLPENIRIRRYNLQKEEYHDFLQ
EEERIVALDYDWDHNNTGLSIMLYWIDNGNTPRIEGSWLDGQERRVLVDSALGWPTGLSI
DFTNSDRIYWSDAKESRIESILPDGQSRQISVFIDVRNPFSVNVFEDHVYWSTQEKGEVF
RQNKFGKGTKTRLLIAGPWLTQINVYQQQKYTSIALKNPCKGTCSHLCLLRPGGYTCACP
EGTSFFPGSSIECDTGFEPEPTMPPPCQCRNGGTCYIDDNKALCICPPEWKGDFCETSVY
GVVTTSVAIALGVTAAVALFLVCLIYSAKKKEKIMNTLHNINLPISVSNFSRPSFWGGNS
ERFNNPSESENDSSNFPKEFLVQ
NT seq
7992 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacagcattaaatggaagcacaactcttcagatgcactggatgatgtttctc
acagaggactttatggatctcaccggatatcaagaacggaaaactttccagaggatcgtg
gagctggactttaaactgcaggaagataagctccagcctctgatgaagagactgtgtccc
gtggaggagtccccgttcccccctctgacatatcctcaggagaccatcggctccacaccc
aaacgcaagtccaaagcggaggccaagaaacacgcgcgctggaaactctggacactgttc
tggacagacagaggttcagatagtggagttccaccaaaggtggcaagtgcagacatggat
ggtggaaacctcagaaacctctacactgacaacctgggcaatgttgagttcatcgctgca
gacatagaggccaggaaaatctactggggtgtccctcagtctgggatgattgaatgtgga
acgatggatggtgtgagcagggtgaccattgtgagcggcttgtctcacccctgtggcatc
actgtgtaccaaaactacctttactacactgatcttgactatgaggttattgaaagagtg
gacaagaacacaggcgcagacatggtggtgatgaggagtggcatggcaggggtgcaggca
ctgaaagtgcatgccagagacaactctgctggcactaccaatgcttgcagtacggacaat
ggaggctgtccccacctgtgtctgccaaaacctgatggacaaaagacatgcgcctgcacc
acaggttttatcccatctcaggatgggtctcactgtgaacagtatgactcttatgctata
gtgtcctcttccaaatttattagaggattccacatcaacagctctgaccactctgaggcc
atggttcctgtgggagcaaatacttactcagttctcagcaagctggacatgcacattgcc
tctggattcctgtactggactgataacagcacctactcatcctacagaggcatttacagg
acaaagacagatggctcacgctattctactgtcatcagtcagttaggcactggaaggatt
cagggcttggcagtagattggatcgcaggaaacttgtacttcactaacgcatatacctct
caaacataccttgaggtgttacgtctgaacacaagcattcagcttatcctgctgaagagt
tcagtggatcgtcccctagatcttgccgtcagccctaaattacgtctcctcttctggact
gatgctggccaatcacccaagattgagagtgctcttttggacggtaccaatcagacagtt
cttgcctctgagagcctgtcatccccccgagggttaacagtcgattacaccaatgacctc
ttgtactgggttgatgacacactggatatgatttcccgcatggcgtccgatggttctcag
cggcagattgtacgctacggtagtcgctaccccgcgccatacagtgtcgctatctttggc
gagtacatgctgtgggtggatcgtaaactgggcaaactgttccaggccagcaagagtcct
gggaatacagacacaccagaggtgatccgagatggtatagaggaactgacggacattgga
gtgtttgactcccatgttcagcccacttctgccaacctggtgggttttaacccatgccaa
gaggacaacgggcgctgtcaacagttttgtttgcaaggcctgagcagcaacagcccaaat
gtgcctgtgcccatggttctctgctcagcaatggtgtctcatgtggctttggcctggatg
acccacttcctgccaaccctacggtgggtttttaacccgtactgccaagaggacaacggg
cgctgtcaacagtttgttttgtcaaggcctgagcagcaacagcccaaatgtgcctgtgcc
catggttctctgctcagcaatggtgtctcatgtggctttggcctggatgagtacctgatc
ttcaccacggattacaccgtaaacagcatgaggctggacccagaagaccacagcaccccc
tttcccacctttacactgggctatggtgttttagccacagagtttgacttccaggacaag
agagtgttttttacccaatatgtgggtttaggcaggagtaaaataggatacattctaacc
accagcagcactagcccaccgatcaccatagccagtgatctggatgatcctgaaggtctg
gcctatgactggacacacaagcgtctttatttcacagattattacaataggagtgtgcag
tctatgggaatagatggccaaaatcgttccttcattgcacatggtgaccgacccagagcc
attgtggtggatccctgctatggatacctgtactggactgactggggatcccctgctaaa
attgaacgagcaacacttggtggaaacttccggatcccaattgtaaacacaagcctctct
cagcctaacgctctgtctttggattatgaggaacggctgctgtattgggctgatgcaaca
ctggataagattgagcgtgcctctttgactggagagaacagggagatcattcttagtcag
acacagtacccattttctgtgacagtgttccagcaggatatctactggactgactggaac
acacggatcgtgtaccgtgccaacaaggacgacggctctggtctgactataatggccacc
gatctccagtacagacccaatgacatccacgtcttctctgccagcaggcaggagagctgc
tcgagtccctgccagctgttcaatggaggctgcagccatgtttgtgtcccaggtccaact
ggtccagagtgtcagtgtcccagcagtggtaactggtatctggccaacaatgggaaagac
tgcatccctgacgatgggcagcggtgccatgcagatcaattcacctgtctggatggaagc
tgtttgtctcagcactggaaatgtgatggctacagggactgcatggatggctcagatgag
ctcgagagagtgtgtgctttccacacctgctcacccacggaattcacctgtgataacgga
ggctgtgtgcctctgtactatgtgtgcgactacacaaacgactgtggagataacagcgat
gagcatggctgtcccttcccaacctgtaaccctaccacagagttcacctgtgttaacgga
cgctgcatcagtgcagcttttgtgtgtgatggaatcaatgactgccgagataacggcacc
acggatgaagttaactgtccggacagaacctgtgcacccggcttagtaaaatgtgacacc
accaacatctgcatttcttcaagtagcctgtgtgatggctttaacaactgtggggacaac
agtgatgaaaatccactcttctgtgctggccggacttgctcggcaaatgagttccgctgt
gataacgggaagtgtattccccagtcatgggtgtgtgatcgcatcccagattgtttggat
ggcacagatgagccacccacctgcgaggatcaggttcgtacttgtaaccctcagcagttt
agctgtgcgaatggacactgcattttggcaacgtgggtatgtgacggcagcaatgactgt
ggagacaacagtgacgaggcccaggaactgcagtgcggatcaaggacttgtaaccccagc
gatttcacgtgccccacttggtacccaggctctccacgctgtattccatggagttatgtg
tgtgatggtgagaaggactgcacagatgccgcagatgagctgcacaactgccccaaccgt
acctgccacatgaatgagtttgcttgtgccaatggtcgctgcattctggtgcccttccac
tgtgaccgtgtgaatgactgtggggacggcagtgatgagattggctgcgtgtaccgcacc
tgctccagtcaagagttcacctgccagaatggagtgtgtattccatcagcatatgtatgt
gatggttatatagactgtcaggacggcagtgatgaactcgagggcttgtgtaggagtcca
gaacccacctgtgcacctggagaattcatgtgcaattctggggagtgcattgacatccac
aaggtctgcaaccatcagagggattgctctgacaacagtgatgagaagggctgtggcata
aatgagtgcagtaacccagccattcaccagtgtgctcagaactgcgtagacacccagacg
ggttactactgctcctgcagggatggctacaaactcatgccagatggcaaggcctgtgag
gatatagacgaatgcaaagaggaaccgggagtgtgcagtcaggtgtgcgagaatgctgtg
ggttccttctattgcaaatgtgcaccgggatacctacgggagcctgatggacacacctgc
cggcagaatagtgggatcgcaccatacctcctctacagcaaccgttactacatccgtaac
ctgaccgctgatggatcatcctcatcggtggtgctgcagggcctatcgaacgttgttgct
ctggactttgatactactgagaagcgtttatactgggtggatattggttcacagcacatt
gagagaatgtatttagacgggacaggaagggaggtcatattgaagagtgacctggatggg
gcagaaggcctggctgtggactgggtgggccgaaagctatactgggcagatgtgactatg
gaagccattcatgtctctgaacttgatggacgttaccggaaaaaactcctgaaaggttgt
gttgacaccaactctacatactgcttcaccaatccgcgggctgttgctgttaaccctaaa
tatggatggctatactggacagactgggggcggacagctttcattggcagggctggaatg
gatggaaccaacacatcagctatcattactaccaagctagtgtggcctcatgccctgacc
attgactacaccaacaacaagatcttttttgctgacgctcacctcaatttccttgattat
gctgatatggatggacaaaacagacatagggctataacaggctccatgccccatgctttc
gctctgaccctgtttgaggatttggtatactggaccgactggaacacccacaccatagag
agagcccacaaatacactggtgctaaccgtgttgtaatgggaaacaacacacaccgccct
aatgacatccacatttaccacccttacagacagccacgcagtgacaatccctgcaatgac
cattacctgacctgtagtcacctgtgtctgattggtccgggtggcacgacggccagatgt
gcgtgtccagatcacttcattggtctggcaattggctttaagatacagtgtgtggccgac
tgctccagcactcagttccgctgtggagataatgagaagtgcattcccatatggtggaag
tgtgatggtcagtcagactgtggggacggctccgatgagcctcagacatgttctccacgt
tactgcccaattggacgcttccagtgccaagatgggaactgcacctacccgtttttcctg
tgtgatggccataatgattgtccagatggatctgatgaagatgctgcactctgcagtgac
catcgttgctctgagaatcagttccagtgtaaaaataagcgctgtatcccagtatcttgg
cactgcgatggagtgcaggactgtgcggatggcagcgatgaggaagctgacagctgtgct
gagaaaacctgcaaacctggacagtttcaatgcaaaaatggactttgcataccaccaagc
tatgtgtgtgacgcacagaacgactgcggagaccaatcagatgagccatatgatgagtgc
atgggtcctgatcataagtgtgatgcagacactgagttctcctgtgatacaaactatcgt
tgtatacctctgtgggctgtgtgtgatggcaccaatgactgtctagacaacagtgatgag
cagagctgccatgagctgacctgtgaccctctgggagatttccgctgcgataatcaccga
tgtgtacccgttcgctggcactgtgatgggaacaatgactgtggagatggatctgatgag
agaaactgtgtaccaagaccttgtntcgacaaccagcagtgcattccaggatcttgggtt
tgtgaccatgacaatgattgtggggacaattctgatgagcgagactgtgagctgcggacc
tgtagtcctggaacattccagtgtacatctggacattgcatcccagaagctcttaaatgt
gatggttttgccgactgcctggactactctgatgagtccacctgcccaactcgctatcct
ggaggacgctggtgtccatcaaaccagttccagtgtaacaacaagctgtgtgtgaaccag
cagtgggtatgtgatggcttcaatgactgtggagaccgctcagatgagcaactcagcctc
tgctggaacattacatgtgaaatgccagccaaattccgctgtgacaatggctactgcatt
tatagtggtctcatgtgtaaccaaaaagacgactgtggggatggcagtgacgaaaaggag
gacagctgtcaggaacctactctcgccccctgtacgcccaatgagtttaaatgcactaat
ggccactgtgtgactctgccttacgtgtgcgaccacaacgacaactgtggagaccttaca
gatgagctgggctgcaattttggccacgaccgcaactgtgatgagaaattatgtcagcac
gagtgtacaaacctgaatggcacgggcttcatctgctcttgtaaacccggctatgctgtg
gatccagataacaccttccgctgcaatgatatagatgagtgttcagagtatggcacgtgc
ccacaggcctgcaagaacactaaaggaagctatgactgtgattgtgccctgggctatagg
aaggtgggcacaggcaatcagtgtgaggctgaaggtcctggaccactgctcctgctgcca
gagaacattcgcatccgacgatacaacctccagaaagaggagtatcatgactttttgcag
gaagaggagcgcattgtggcattggactacgattgggaccacaacaacactggacttagt
atcatgctgtactggatagacaatggcaacactccacgtatcgaaggttcctggttggat
ggtcaagagagaagggttctggtggacagtgctttgggctggcctacaggcctgtccatc
gacttcacaaacagcgaccggatctattggtcagatgcaaaggagagtcgcattgagtcc
atactgccagatggacagagcagacaaatatcagttttcatagatgtaagaaaccctttc
agtgtgaatgtatttgaggaccatgtgtattggagcacgcaggagaagggtgaagtgttc
agacagaacaagtttggcaaaggcaccaaaaccagactcttaatagcaggaccttggctt
acacagatcaatgtctatcagcagcagaaatacacctctatagccttaaagaacccttgt
aagggcacatgcagtcacctgtgtctgctgaggccgggaggctacacctgtgcctgccca
gagggcaccagcttcttccctggcagcagtattgaatgtgacacagggtttgagcctgaa
cccactatgccccctccatgccagtgcaggaatggtggaacctgttatattgatgacaat
aaggcgctctgcatttgcccccctgaatggaaaggtgatttctgtgagaccagtgtttat
ggtgtagtcacaacctcagttgctattgctcttggagttacagctgctgtggctcttttc
ctggtttgcctgatatattctgcaaaaaagaaggagaaaattatgaacactctgcataac
attaatctgcctattagtgtatctaacttcagtaggcccagcttctggggtggtaactct
gaacgttttaacaacccatctgaatcggagaatgacagcagcaactttcccaaagagttc
ttggtacagtag
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integrated database retrieval system
