Cyprinus carpio (common carp): 109099945
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Entry
109099945 CDS
T05134
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109099945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109099945
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109099945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_III
MutS_IV
MutS_I
MutS_II
GOLGA2L5
Motif
Other DBs
NCBI-GeneID:
109099945
NCBI-ProteinID:
XP_042591428
Ensembl:
ENSCCRG00000001983
UniProt:
A0A9R0AAR3
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All DBs
Position
B12:complement(14040359..14047029)
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AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAVFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQISYKA
SPGNLTQFEEILFGSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFAD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEMEKQIAMSCLQAVIKYLELLSDEANFGSFKITTFDLNKYM
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQAVGQLPSLVLA
LERYSGKHQVLLHAAFISPLNDLVSDFSKYQEMIETTLDMNQVEHHEFLVKPSFDPTLSE
LRENMDRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVCHAAPVPYVRPKILEKGSGRLIIKAARHPCVEAQDDVAFIPNDVTFRRG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISSAGEEAGPEAKKRCLEKHEGERIIEAFLDKVKSMPVEGMSDE
AVKEELRKLKAEVIGKNNSFVNEIVTRSAKVELTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaagcaaaatctgtccatggacagtgcgtctgaacatggatttctg
aatttttatttttccatgcccgagaaaccggacaccaccgtgagagtatttgatcgaaac
gattactatacggtgcacggaaaagatgctgtttttgcagccaaggaggttttcaagacg
aatggagtcatcaagaacttgggcacaggcaataagaggttggagagtgtggtcctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtaccgggtggag
gtttacaaaaatgccagtaagagcagcaaagaacatgactggcagatatcttacaaggcg
tctccaggaaacctgacccagtttgaggagattttatttggcagtggaggaggtcctggg
gagggagctgccggtgttgtcggggttcgtcttggcaccggggccgatggacagcgtgtc
gtcggtgttggctatgtggacagcaccctcaggaaactcggtgtgtgtgaattcgcagac
aacgatcagttttccaatctggaggctcttcttgtgcagatcgggcccaaagagtgtgtg
ctccctggaggagatgcaggtggagacctcgggaaactcaaacaggtggtgcagcgtggt
ggcattctgctcacagacaggaagaaatcagagttcacaaccaaagacattgtgcaggat
ctgaatcggctcctgaaggcccgtaagggagagactgtgtccagtgctgcacttccagag
atggagaaacagattgcaatgtcttgcctacaagccgtcatcaaatacctggagcttctc
tcagatgaggccaattttggttccttcaagataaccacctttgacctcaacaagtacatg
cgtctggataatgctgctgtgcaggctctgaatctcttccagggctcttctgatgatgct
acaggcactcattctctggcaggccttttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcaaccagtggatcaaacagcctctcattgacaaaaacaagatagaagaaagactg
gatcttgtggagacttttgtggaagactctgagctgaggaagagttgtcaggaggatctt
ctccgccgttttccagacctgaaccgaatggcgaagaagttccagcgtcagagctctaat
ttacaagactgttaccgagtctatcaggctgtggggcaactgccgagtctggtgctggcc
ttggagagatacagtggaaaacatcaggtcctcctgcacgcagcattcatctctcccctc
aatgaccttgtttctgacttctccaaatatcaggagatgattgaaaccacactggacatg
aaccaggttgaacatcatgagttcctggttaaaccctcatttgatcccaccttgagtgag
ctcagggagaacatggatcgcttggagaaagccatgcaggcggccttgaacagcgcggct
cgtgaacttgggctggaagcagctaagactgtgaagcttgaatccaacgcacagattggg
tactttttccgagtcacatgcaaagaagagaagagtcttcgcaacaacaagaaattcact
actttagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtacgaagaggctcaaaatgccattgtcaaagag
atcatcagcatagctgcaggctatgtggatccagtacagactctgaatgaggtgatagct
cagcttgatgcagtagtgagttttgctgtggtgtgccatgctgctccagtgccttacgta
aggcctaaaatactagagaaagggtcagggagactcattataaaggcagcaagacatccc
tgtgttgaagcccaagatgatgtggctttcattcccaatgatgtcaccttcagaaggggc
gaggagatgtttcatatcatcacaggtccaaatatgggtggtaaatctacatacattcgt
caagtgggtgtgatcgtgctgatggcacagattggctgttttgtaccatgtgatgaggca
gagttgagtgtggtggactgcgtgctcgctcgagtgggtgcaggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatcagccaca
gaggattctctcatcattattgatgaattgggcagaggcacatccacatatgatggcttt
ggtctggcctgggcaatctcagagtacattgccacccgcctcaagtccttctgcctgttt
gccactcacttccatgaactgacggcacttgcacagcaggttcccactgtccgtaacctc
cacgtcactgctctgaccacagacagcactctaacaatgctctacaaggtgaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaaacatgtg
attgctaatgcacgggagaaggctttggagcttgaggagttccaagatatctcaagtgct
ggggaggaagctggacccgaggccaagaaacgctgcctggagaaacatgagggggagagg
atcatcgaggctttcctggataaggttaaatcaatgcctgttgagggcatgtctgatgag
gctgtcaaagaggagctgcgcaaactcaaggcagaggtcatcggaaaaaacaatagcttc
gtcaatgagatagtgacacgttctgccaaagtcgaactgacttcagcctga
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