Cyprinus carpio (common carp): 109100257
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Entry
109100257 CDS
T05134
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109100257 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109100257 (xrcc5)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
109100257 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
109100257
NCBI-ProteinID:
XP_042587836
Ensembl:
ENSCCRG00000002205
UniProt:
A0A9Q9WQR7
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All DBs
Position
B9:complement(30693499..30707490)
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AA seq
727 aa
AA seq
DB search
MARAAKSALVLCMDVGFSMSNSEPGQEPPFEQAKKVIQKFVQRQVFAENKDEVGLVLFGT
DGTKNRLAKDGQYENITVHRHLMMPDFELLEEIESELQPGGQQADWLDALVVCMDLLQQE
TMGKKFERLNIVLLTDLNVQTSADQLDVIINSLKKAGITLQFFLPFPLDGEDRADGGGDG
PGPSAASARPGKGLTSQQTQGLEMVRNIMTSLEEEDGLEEVHTFRDALEKLSIFKRIDRR
PMAWPCQLTIGSSLTIRIVGYKAVTEEKVKKSWTIVDAQSHQRDDVKRETVYCLNDDDET
EVQKDDTIQGFRYGSDIVPFSKVDEDQMKYKSDGKCFSVLGFTKQELIRRHQFMGSQVVK
VFAARDDEHAAVALSALIRALDSLKMAAIVRYAYDRRSNPQVGAAFPCIKEKYECLLYVQ
LPFMEDLRQFTFPMLENNKKFTPSESQLSAVDALIDSMMLVEKDEDGESVDVFKVNHIPN
PQFQRLFQCLHHRGVNPDDPLPPVEPWLKRALERPQAVSARCQAPLQDVKTKFPLKVVVK
KKEQKTSADVFGSSADEPDAKRVKVDEEMEFNLAEIAAGNITSVGSVNPVRDFCALVQQK
TVSFDQACQQLTHRIEQLLGNRSPEYYMKSIACIQAFRDQSVSSGNAELFNSYMQSLKRS
VPDRNLQEFWDLLIQDALTLISKDEVDGSTISKQDANQFLAFEQKEEVQAAPVQEDTGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcagcgaagtcagcgttggtgctttgcatggatgtgggtttctccatgagc
aactctgagcctggccaggagccgcccttcgaacaggccaagaaagtcatccagaagttt
gtccagcggcaggtgtttgctgagaataaggatgaggtgggtctggtgctgtttggtacc
gacggcactaagaaccgcttggccaaagacggccagtatgagaacatcacggtgcaccgt
cacctcatgatgcctgattttgagctgctcgaggagattgagagcgaactgcagccgggt
ggccagcaagcggactggcttgatgctctggtcgtttgcatggaccttttgcagcaggaa
accatggggaagaagtttgagcgtctgaacattgtcctgctgacggatctgaacgtccag
acctcggcagaccagctggacgttatcatcaacagcttgaagaaagctggtatcaccctg
cagttctttttgccgttcccgttggatggtgaggacagagcagatggtggaggagatgga
ccgggaccctcagcggcttctgcccgtcctggaaaaggcttgaccagtcagcagacacaa
ggtctggagatggtcagaaacatcatgaccagcctggaggaggaagacggcctggaggag
gtccacacatttagggatgctctggagaagctgtccatcttcaagcgcatcgacaggagg
cccatggcttggccctgtcagctgaccatcggcagctctctgaccatccgcatcgtcgga
tacaaagctgtgacggaggagaaggtgaagaagtcctggaccatagtagatgctcagagt
caccagagagacgacgtcaagagagaaacggtttactgcctgaacgatgacgatgaaact
gaagtacagaaggacgacactatccaaggtttccggtatggaagtgacattgtgccgttt
tctaaggtggacgaggaccagatgaaatataagtctgatgggaagtgtttttctgtgctg
ggcttcactaaacaggagctgattcgtcgtcatcagtttatgggaagccaagttgtcaaa
gtttttgcagccagagatgatgagcatgcagcagtggcgctgtctgctctgattcgtgcc
ctcgacagtctgaagatggcagcgattgttcgttatgcttatgaccgtcgcagcaaccct
caagtgggcgccgcttttccttgcataaaggagaaatatgaatgtctgctgtacgtgcag
ctgccgttcatggaggatctccgtcagttcacattcccaatgttggaaaacaacaagaag
ttcacgccttcagagtctcagctgtcagccgtggatgcgctgatcgactccatgatgctg
gtggaaaaggatgaggatggagagagcgtggacgtcttcaaagtcaaccacattccaaac
ccacagttccagagacttttccagtgcttgcatcaccgtggtgtgaatcctgacgatccc
ctgccgcctgtagagccgtggctgaagagggctctagagcggccccaggctgtgtccgcc
cgctgccaggcccctctgcaggacgtcaagaccaagttcccactgaaagtggtggtgaag
aagaaagagcagaagacgagcgcagacgtgttcggcagcagtgctgatgaaccagatgca
aagagagtcaaagtggatgaagagatggagtttaacctggccgagattgctgcaggaaac
atcacatcggtcggcagcgtcaatccagtccgagatttctgcgcgctggttcaacagaag
accgtttctttcgatcaggcgtgccagcagctgacccacaggattgagcagttgctgggc
aacaggagccctgagtactacatgaagagcatcgcctgtatccaggccttcagggatcag
tccgtatcgagcggaaacgcagagctgttcaacagctacatgcagtccctgaagaggagc
gttcctgacaggaatcttcaggagttctgggatctgctcatccaagatgctctgacgctc
attagcaaagatgaagtggacggaagcaccatttccaaacaagatgcgaaccagttcttg
gcatttgagcagaaagaggaagtgcaggcggcacctgtgcaagaggacactggagatgtg
gatgatctgctggacatgatgtaa
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integrated database retrieval system
