Cyprinus carpio (common carp): 109100422
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Entry
109100422 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109100422
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109100422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109100422
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109100422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
DUF4090
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
109100422
NCBI-ProteinID:
XP_018969415
Ensembl:
ENSCCRG00000018331
UniProt:
A0A8C2ADT4
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All DBs
Position
B13:complement(23007778..23012218)
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AA seq
309 aa
AA seq
DB search
MHELRLAITLPLAREHAYKYFCARPRSPVSRPTPFCAASRVFPESYITMSGCRVFIGRLS
PHARERDVEKFFKGYGHIREINLKNGFGFVEFDDHRDADDAVYELNGKELCSERVTIEHA
RSRRGRGGGPGMGGRFSPRFGGYRKSHSGGSRYGPPVRTEHRIIVDNLSSRISWQDLKDL
MRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLKLYEDRKRDRSRS
RSRSRSSSRSRSRSPSRSRTPERGSKRSRSRSASRTPEKKSTSNRSPSRSPTPPRKQSRS
RSASAESQH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagcttcgcctggccattaccctccccctcgcgcgtgaacacgcatataaatac
ttctgcgcgcggccgcgttctccagtctcgaggccaacgccattttgtgctgcaagcaga
gttttccctgaatcgtatatcaccatgagtggatgtcgtgtgttcatcggccgtctgagc
cctcatgctcgtgaaagagacgtggagaagttttttaaaggctacggacacattcgggag
attaacctgaaaaacggatttggctttgtggagtttgacgaccacagggacgcagatgac
gcagtgtacgagctgaatggaaaagagctgtgcagtgagagggtgactattgaacatgcc
cgctctcgccgaggaagaggcggtggcccaggaatgggaggacgtttctcgccacgcttt
ggagggtatcgtaaatcccacagtgggggttccaggtatggaccacccgtgcgcacggag
cacagaatcattgtggataatctctcctctcgcatcagctggcaggatctgaaggacttg
atgaggaaggtgggagaagtgacctttgtggatgcacacaggaccaagaagaatgagggg
gtggtggagtttgcttcacacagtgatatgaagaatgccattgagaagctggacggaaca
gatctgaatggacgcaaactcaagctatacgaggatcgcaagagagatcgtagtaggagt
cgttcccgcagcaggagcagctcccgctcccgttcccgatcacccagtcggagtcgcacc
cctgagcgcggaagcaagcgctctcgcagtcgctcggccagtcgcaccccagagaagaag
agtaccagcaaccggtctccttcccgctctcctactcctccacggaaacagagccgctct
cgatctgcttctgcagagagtcagcattga
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integrated database retrieval system
