Cyprinus carpio (common carp): 109100535
Help
Entry
109100535 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03430
Mismatch repair
ccar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109100535
03460 Fanconi anemia pathway
109100535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109100535
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109100535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109100535
NCBI-ProteinID:
XP_042593388
Ensembl:
ENSCCRG00000025417
ENSCCRG00000040573
UniProt:
A0A9Q9X1A0
LinkDB
All DBs
Position
B13:25779563..25786734
Genome browser
AA seq
721 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASVSHVAHVTITTKTADAK
CAYRASYCDGKLKAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRY
AIHNSGKSFSVKKQGEMVADVKTLQNASVLDNIRAVFGVAVSRELIEVECEDQKLAFKMK
GYISNANYSVKKCILVLFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLRXLEIAPQN
IDVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSASTSASKAS
ADSQERVYDHQMVRTDSKVQKLDAFLQPSTSSSAAQSRSDKASSSSTAAQGSAEPDHLEM
LTALDVLEPCDAEDPQTDGQPPPDEAPPRKRPHVEEVEEDLTAASLPRRRVIKLTSVKEL
REDIEQHTHKGLQDLLQNHSFVGSVNPQWTLVQHQTKLYLFNTTKLSQELFYQILIYDFG
NFGVLRLSNPAPLYDLAMLALDLEESGWTEEDGPKEGLAQYIVDFLKQKAVMLEEYFSLE
IDEEGNLTGLPMLLDNYTPVMEGLPMFILRLATEVNWDREKECFHDFSIECSHFYSIRKQ
YTLEPDAEEPQDAEMSWQWKVEHLIFKALRNLFSPPKHFSEDGSVLQIASLPELYKVFER
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccgcagactcgatgagactgtagtgaaccgcatcgcagcgggagag
attatccagcggcctgccaacgcgatcaaagagatgatggagaactgtttggatgcaaag
gccacaaatatccagataacagtgaaagagggcggactgaagctcatcctcattcaggac
aacggcactggcatcaggaaagatgatatggaaatagtctgtgagcgttttacaaccagc
aagcttcagtcttttgaggacttgtcatcaatcgcaacatatggattcagaggggaggct
ctcgccagtgtaagtcatgtagcccatgttacaatcaccactaaaacagccgatgcaaaa
tgtgcctacagggctagttactgtgatgggaagctgaaagctccacctaaaccctgcgct
ggaaaccaagggacattgatttctgtagaggatctgttctataacgtgtctacccgacgg
aaagccctgaagagccccagtgaggaatattctagaatcattgaggttgtgagcagatac
gccattcacaactctgggaaaagtttttctgtcaaaaagcaaggtgagatggttgcggat
gtgaagacccttcagaacgcctctgtgctggacaacattcgtgctgtgttcggtgtagct
gttagcagggagctgattgaagttgagtgtgaagatcagaaactcgcttttaaaatgaag
ggctacatctccaatgcaaactactctgtcaagaaatgcatccttgtcctttttatcaac
catcgcctggtggagtctagtgccctgaaaaaagcaattgagactgtctacactgcttat
cttcccaaaaacactcatccttttctttatcttaggtaattagagattgctcctcaaaac
attgacgtgaacgttcaccccaccaagcatgaggtgcacttcctgcacgaggacagcatc
atcgagagcgttcagaaacacatcgagagtaaactgcttggctcgaactcttcacgcaca
tacttcacacagactttgcttccaggactttcggcgtccaccagcgcatcaaaagcctca
gcagattcccaggagcgagtatacgaccatcagatggtccgcactgacagcaaagtccag
aagctggatgcgtttctccagccatcaacttcatcttctgctgctcagagcaggtcagat
aaagcctccagctcttccactgctgctcagggttcagccgaaccagaccacttggagatg
ctgactgctctggatgtactggagccatgtgacgcagaggatccacagactgacggtcaa
cctcctcctgatgaagcaccaccaaggaaaagacctcatgttgaggaggtggaggaggat
ttgacggccgcctctcttcccaggagacgcgtcattaaactgaccagcgtgaaggagctc
cgggaagatattgagcagcatactcacaaaggtttacaggatctgctccagaatcactca
ttcgtaggttcagtcaatcctcagtggactctagtgcagcaccagaccaaactctacctg
ttcaatacaaccaaactcagccaggagctgttttatcaaattttgatctacgattttggt
aactttggggttcttcgattgtcgaatccagctccgctctatgatttggccatgttggct
ctggatttggaggagagtggatggacggaggaggacggtccaaaagaaggactggctcag
tatatcgtggatttcttgaagcagaaagcagtaatgctggaagagtacttttctctggaa
atagatgaagaagggaacctgactggtctgccaatgctgcttgataattacactcctgtt
atggagggacttcccatgttcattttgcgtttagccacagaggtgaactgggatcgagag
aaggagtgttttcatgacttcagcatagaatgcagtcacttctattccataaggaaacaa
tacacactggagccggatgcagaagagccacaggatgcagagatgagctggcagtggaag
gtagagcatttgatttttaaagcactccgcaatctcttcagtcctccaaaacacttcagt
gaagacggcagcgttctgcagatagccagcctgcctgaactctacaaagtgtttgagaga
tgctaa
DBGET
integrated database retrieval system
