Cyprinus carpio (common carp): 109100693
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Entry
109100693 CDS
T05134
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04140
Autophagy - animal
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109100693
04137 Mitophagy - animal
109100693
04148 Efferocytosis
109100693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109100693
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109100693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Rbsn
Motif
Other DBs
NCBI-GeneID:
109100693
NCBI-ProteinID:
XP_018969674
Ensembl:
ENSCCRG00000010974
UniProt:
A0A9Q9VFK2
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All DBs
Position
B20:complement(12359871..12378480)
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AA seq
774 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELANQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLNSDESEKENEVESQLNSFYLKALEGFLMVLSEDGDMVYLSENVNKSMG
LSQFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCTGHVRVQECGEVSGDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQNMTEPK
AEEKENQKMEDEASEVDILKLFKPESLKCPMKSPDLYEKLKEEPEALNVLAPSAGDTIIS
LDFNNSDSDMQLLKEVPLYNDVMLPSSSEKLPISLSPLTPTDSAPVLTKLDTGAEDFPFS
SASDRGPDSTNTPSTSGLGSSGPNSPMDYCFQVDSDINSEFKLDLVEKLFAIDTEAKTPF
SSQDMEDLDLEMLAPYIPMDDDFQLRIPSPLDPLPSGPHSVSAMSSLFQPLSSPASPASS
SSSTVKQEPSSQGPSPLHLLQEVCNAPVSPFSGSRDVSPARSSTPQNSNQLNKRELSPKM
LAIQNAQRKRKLEEVTSLSEAVGLSALLQSVDSAIEPGKRAKVLELKGSSVLGGNKTILI
LPSDVASRLLCSSLESCSGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcacgatctcgcaggggaaaggagtccgaggtgttctacgagttagca
aaccagctccccctgccacacaatgtcacctcccacctggacaaagcctccatcatgagg
ctgaccatcagctatctgcgcatgaggaagctgctcaactctgatgaatcagagaaggag
aatgaggtggagagtcagctgaacagcttttatctgaaggccctggagggtttcctcatg
gtcctgtctgaagatggagacatggtttatctctctgagaatgtcaacaagagcatggga
ctctcacagtttgatctgactggtcacagcatctttgaattttcacacccatgtgaccat
gaggagctgagagagatgctggtccacaggacaggatccaaaaagaccaaggaacaaaac
acagagcgcagcttcttcctgcgcatgaagtgcacactcactagcagaggtcgcactgtc
aatatcaagtctgctacgtggaaggttcttcactgcactggtcatgtgcgtgtgcaggag
tgcggcgaggtttcgggagactctggctttaaagagcctcctctgacctaccttgtgctc
atctgtgagcccattcctcatccctcgaacatcgaggtgcctctggacagcaagaccttc
cttagccgccacactctggacatgaagttttcgtactgtgatgaaaggatcacagagctg
atgggatatgagccagatgatctgctgaacaggtctgtgtacgaatactatcatgccctg
gattcagatcaccttaccaagacacatcacaacttgtttgcaaagggccaggccaccaca
ggccagtaccgcatgctggctaagaaaggtggttttgtgtgggtggagactcaggccacc
gttatctacaaccccaagaattctcagccacagtgcattgtgtgcgtcaactatgttctc
agtggcattgtggagggggatgttgtcctgtccttgcagcagaacatgactgagcccaag
gctgaggagaaagagaaccagaagatggaagatgaggcctctgaggtggacatactcaaa
ctcttcaagccagaaagcctcaagtgtcccatgaagagccctgacctgtatgagaagctg
aaagaggagcccgaggctctcaatgtgttggcaccttctgcaggagacaccatcatctct
ctggacttcaacaactcagattctgacatgcagctgctgaaggaggtgcccctctacaat
gatgtcatgctgccctccagcagcgagaagctgcccatcagtctgtctcctctgacgccc
accgactccgccccagttctgaccaaactagacaccggagcggaggacttccctttcagc
tctgcctctgatcgtggtccagactccacaaacacaccttccacatctggactgggctcc
tcggggcctaacagtcccatggattactgtttccaagtagactcagacatcaattctgaa
ttcaaactggacctggttgagaaactgtttgctatcgataccgaggcaaagacccctttt
agctcccaggacatggaggatcttgacctagagatgctggctccatacatcccaatggat
gatgacttccagctgcgcatcccctctccgctggatccgctcccctctggccctcactct
gtgtcagccatgagctccctgttccagcccttatcctcccctgcatctccagcctcttcc
tccagcagcacagtgaaacaggagccgtcatctcagggcccttcgcccttgcacctgctg
caggaggtgtgcaatgcccctgtctcacccttcagtggcagtcgggacgtttcccctgct
cggtcctccaccccacagaacagcaatcagctcaacaagagagagctgtctccaaagatg
ttggctatccagaacgcccaacgcaagaggaagctggaggaagtgacatcactttctgag
gctgttggactgagtgctttacttcagagtgtggacagtgctatagagcctggaaagagg
gcaaaggttttagagcttaaaggatcgagtgtgcttggaggaaacaaaaccattctcata
ctgccctctgatgtggccagtcgtctgttgtgcagttctttagagagctgcagtgggctg
cctcagctaacacgttacgactgcgaagtcaacgctcccgtgcaggaccgccatcatctg
ctgcagggagaggagctcctgcgtgctctggaccaagtcaactga
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