KEGG   Cyprinus carpio (common carp): 109100928
Entry
109100928         CDS       T05134                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
  KO
K11981  E3 ubiquitin-protein ligase NRDP1 [EC:2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109100928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccar04131]
    109100928
   04121 Ubiquitin system [BR:ccar04121]
    109100928
   03029 Mitochondrial biogenesis [BR:ccar03029]
    109100928
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109100928
Membrane trafficking [BR:ccar04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    109100928
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    109100928
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109100928
Mitochondrial biogenesis [BR:ccar03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    109100928
SSDB
Motif
Pfam: USP8_interact zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_6 zf-rbx1 zf-C3HC4_4 zf-Nse zf-C3HC4_3 zf-RING_UBOX zf-RING_5 Sina_ZnF U-box zf-TRAF zf-ANAPC11 zf-RING_10 LXG DUF641 zf-TRAF_2 Sos7 DUF4795 SlyX TMF_DNA_bd Trimer_CC zf-RING_16 ImpA_N ATG14 zinc_ribbon_16
Other DBs
NCBI-GeneID: 109100928
NCBI-ProteinID: XP_042606262
UniProt: A0A8C2DN39
LinkDB
Position
B23:complement(19280651..19291648)
AA seq 318 aa
MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFAQQQICPVDRTVV
TLAHLRPVPRIMRNMLSKLQITCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVTCEEGC
GLEMPKDEMPNHNCIKHLRSVVQQQQTKIADLEKTAAEHKHQLAEQKRDIQLLKAYMRAI
RSANPNLQNLEESIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq 957 nt   +upstreamnt  +downstreamnt
atggggtacgacgtcaccaggttccaaggagaggtggacgaggatctgttatgtcccatc
tgcagtggggtactggaggagccagtgcaggccccgcattgtgagcatgctttctgtaac
gcctgcatcacacagtggtttgcacagcaacagatctgccctgtggaccgcaccgtggtg
actctagcccatcttcgacccgttccccgaatcatgcgtaacatgctttccaagctgcag
atcacctgtgataacgccggcttcggctgcacggccacccttcggctcgaccagctgcag
tcacatctcaaggactgcgaacacaaccctaaacgacccgtcacgtgtgaagaaggctgc
gggctagaaatgcccaaagatgagatgcccaatcacaactgtattaagcacctacgcagc
gtggtgcaacaacagcagaccaagatcgcagatctagagaagactgcagctgagcacaag
caccaacttgcagaacagaaacgtgacatccagctcctgaaagcttacatgcgagcgata
cgaagcgctaaccctaacttacagaacctggaggagagcatagagtacaatgagatccta
gagtgggtgaactctctccagcctgctcgcgtgacccgctggggaggaatgatctccaca
cccgacgccgtcctccaggccgtcatcaaacgatcactcatagacagtggatgcccgttg
tcgatcgttaatgacctcatcgagaacgcccacgagcgtaactggccccaaggcttggcc
acgctggagacacggcagatgaaccgccgatattacgaaaactatgtggccaagcgcatt
ccgggtaagcaggccgtggtggtgatggcctgtgagaaccagcacatgggtgaagatatg
attctggagccggggttggttatgatcttcgctcatggcgttgaagagatcttatag

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