Cyprinus carpio (common carp): 109101166
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Entry
109101166 CDS
T05134
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109101166 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109101166 (dmxl1)
Membrane trafficking [BR:
ccar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109101166 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109101166 (dmxl1)
RAVE complex
109101166 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PEP5_VPS11_N
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
109101166
NCBI-ProteinID:
XP_042617426
Ensembl:
ENSCCRG00000014874
UniProt:
A0A9Q9YC12
LinkDB
All DBs
Position
A8:617408..651872
Genome browser
AA seq
2916 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVHNQPFTAYASGCDIVILGSDFERIQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGNIICVFEPVEVSPQGKAQKQKLSYHWQKSGQFVLQSVAHILTW
HPTGSWLLTGSACLQMWCDVQSSTETEGEAESASPRRSWRCVWQCKSAAPTHFIKFSPDG
EFFATAGQDDCLVKVWYSTSKWQADVTKLFTPLDLRSGAEINFSFVYLAHPRSVTGFSWR
KTSKYMPRGTVCNMLLTCCKDSVCRLWAETLLPSDCLLSGLRNNHTMKANNTKKSSSSTR
VQNQNPLELKLKPSWREEVRSLSQLSYSGPLPQQQNKHYSHRTNILHANALCHFHIAASI
NPATDIPLLPSISSMNGSDEEEPGGPFTVHWLNNKELHLTLSMEVFLQQLRGSGEQNGPT
ERYDADEEGSGADAVSLPAAAVDHQVDVLLSDWNRAADMLFSIHPMDGSLLVWHVDWLDE
YQPGMFRQAQVSFVSRIPVAFPTGDAISLSRSVVMYACNRNVDLAMQHGRQRPVGLPHSS
SSALIGLSQNKPSSNSLRLSIFTPSVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKS
RYCGHRFHLNDLACHSLLPLLLTTSHHNALRTPDGDTALTRPAAAPSRRSRMSSGSVAQD
PNAIYSELILWRVDPVGPLSYSGGVSELARINSLHTSAFSNVAWLPTLIPSNCLGVYGNS
PSACFIASDGHSLRLYQAIIEAKKLLSELSNPNISKYVGEVFNIISQQSTARPGCIIELD
AITDFQGKETQLLHVFEEDLILGNEKIDDYLQDSVPSRTLFSARFFLVVVEITQSSRSLL
HMWHLQLDAVPVVMEQTQTPNKETLSPSPVNSSQFNFETAGSPQSPRPKLNTSNLQSACR
LALTSTKVFSQELDLPQGVEVMRVSPAAGHLSASSLQPAGRSPYLLATSCSDGSVRFWRC
SSVSDPDGSADPSYVWEEWPLLVEEGEASSSALSVSGQLMGLSCCHTSRVAVAHRSHEPI
MHISIFQCDSTGGSQWILEQTLKVCSSDSPSANDYLSNGCSVVGSKRQVHLDWVSREDGS
HILTVGLGSKLHMYGMLSGKPPDLGLSDRSKECSCSRLVLLRVVDLVSSVEGSLPIPVSL
SWVRDGILVVGMDCEMHVYSQWQPPAPVKLSRTGSVTSLNSVVKNEGLSLNPSKKTLTRS
MTSLAQKLSGKRTVYDLPAEMEDSGLFEAAYNLFPTLPQYHPVQLLELMDLGKVRRAKAI
LSHLVKCIAGEIVSMKDTTINQERRLRSLTISASGSTARDPKMFSKAESSDYTEIDSIPP
LPLHALLAADEETAPSAKERSESVSAHGQSDTYDELFQTSGVSTDDMDPFDGDEEDANAK
VIDLSKYSPMFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLMALADTIASTSTHIGESQGK
GQGGETLDECGLKFLLAVRLHTFLLTSLPPAHRAPLLCQGLSTCHYAWAFHSEAEEELLN
MLPVLQKGEPTWPELRAMGVGWWLRSTNKLRRCIEKVAKAAYQRNNDPLDAALFYLAMKK
KAVVWGLYRSHHNVKMTAFFSNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLK
DAVEVCIEKMQDLQLALVVCRLYESEFEMSCTYKRILQRHVLGQDHQIAAHQDPFLRSMA
YWVLNDYSRALDTLLEPNADTSHEGSAGSSPYSPDVFNFYTYLRTHPLLLRRHFGSCDKA
KVGLTAEGRAVDSISLTERRLFFTAAYAHLQAGCPMLALEVLSKMPKVVKRSPMRESSPV
TSSEHKDQASAPWPVLNGLESVSSLSSPREDSRSDSVLSFDWSQPSVTLQDEPLELKWDS
DKEDLDEEESGLAMKTICPEKDGSASRDAPEVTSTPTGHSTDDSPALTEDILAAQLKFSS
CLKILTTELRTLSTGYELDGGKLRHQLCHWLERAVAALQRCCGYNPFLQHLPEGISADLS
QVEDLEERGAAEQARELQQRRRLWLKRNQPLLRIFLSYCSLHGSHGGGLASVRMELILLL
QESQQDDSLQISAPAPQHLSAPLFLAWTAISKTVVANPIVHLTNLTHDILHTINALDAPP
HPDVVSNEIYVMHTLAASLSACIYQCLCDGHSYSHVNPFTGITYQSVLLSHQPPVRSVSI
EEAVLPNTSPAQWPGVSVLMQLLSASGDENQPGLPVLLCEILTAVFLSLFVHGLATHSSH
ELFRIVAHPLNSKLWVAVFGGGARVPVLEKPSSPTVEDAERKQRRLRLSSSRSNSREVPD
SPVSPRPVVMERETSVCKERFVPPELSIWDYFIAKPYLPPSASRVEYDSEESQGSEDEED
EEDEDEGDPNSPQAEHSNNSSYSWCLMRLAMVQLVLFNLKTFYPMAGHDLLDLPVCSPLC
HAALKTLQRWEQLLLKRLEIFGGPPSRFICSQLLEESVSLGPALLRHKALFEPSNTPFRS
RRRDALPVRRLWQYLVKQEEVQEMFIRNIFTKKRDQNEETDRVKCSVPLESTHNQIEADQ
GFPGGKARIIHKESDIITAFAINKANRNCLVIASTHDIQELDVSSILSTQILTWVDEENE
AEVKGTDEFLVVHARDDFSALHSSTPYTRSSPGTPINMPWLGGLQTGRGAAVLIKRNINN
VRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSPGNSRVTRIRFSYQGNKFGIVD
ADGALSLWQTSTSGNAPKPYLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTL
VTPAYSLVHGFSCHESGSTVLALASKQQLLLSGGRRGWISVLDLSLKIQRQSFQAHDSPV
KALAVDASESCFISGSAEGNIKVWSMCTQSLLHTFSNEHARQSLFRNLGTGVMQIETGPA
NHIFSCGADGTMKLRLLPDALSLYCSGVKNDVRFIM
NT seq
8751 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcacaggagccgtcaaccccggagacaactgcttctctgtg
ggcagcgtccacaaccagcccttcacggcgtacgcctctggctgcgacatcgtcattctg
gggagtgactttgaaaggattcagatcattccaggagccaaacatgggaacatccaggtg
ggctgcgtggactgttcactgcagggaggacagatcgcagcgtcgtacggaaacattatt
tgtgtgtttgagccggtggaggtcagtccacaagggaaagcacaaaaacagaagctgagt
tatcattggcagaagagcgggcagttcgttctgcagtcggtcgcacacatcctgacgtgg
caccccacaggttcatggcttctgacgggctcggcgtgtctgcagatgtggtgtgatgtt
cagtccagcacagagaccgaaggggaggctgagtccgccagtcctcggcgctcctggaga
tgcgtctggcaatgcaagtccgctgctccgactcacttcatcaagttttccccagatgga
gagttttttgcgaccgcaggacaggacgactgtctggtgaaggtgtggtacagcaccagt
aaatggcaagcggacgtcactaaactcttcacgccgctcgacctgcgctccggagccgag
atcaacttctccttcgtttacctggctcaccctcgctccgtcactggcttctcctggagg
aagaccagcaagtacatgcccagaggcaccgtgtgtaacatgctgctgacctgctgcaag
gacagtgtgtgtcgcctgtgggccgaaacactgcttcccagcgactgtttgctgtctgga
ctcagaaacaatcacaccatgaaggcaaacaacacgaagaagtcctccagcagcacccga
gtgcagaaccagaacccgctggagctgaagctgaagccgtcgtggagagaggaggtccgc
agtttatctcagctctcatacagcggtcctctgccccagcagcagaacaaacactacagc
caccgcaccaacatcctgcacgccaacgcactgtgccacttccacatcgccgccagcatc
aatccagccacagacatccctctgctgccctccatctcgtccatgaacggctctgatgag
gaggaaccaggcggcccgttcaccgttcactggctcaacaacaaagagctgcacctgacg
ctgagcatggaggtgtttctacagcagctgaggggtagcggcgagcagaacggacccacg
gagcgttacgatgctgatgaggaggggagcggcgctgatgctgtctctctccctgcggca
gctgtggatcatcaggtggacgtgctgctgagtgactggaacagagcagcagacatgctg
ttcagcatccacccgatggacggctcgctgctggtgtggcacgtcgactggctggacgaa
taccagcccggcatgttccgacaggcacaggtttccttcgtgtccaggattcccgtggcc
ttccccaccggcgacgccatctcactcagccgcagcgtggtcatgtacgcctgcaacaga
aacgtagacctggccatgcagcacggccgtcagcgtcccgtgggcctgccgcactcgtcc
tcctctgctctgatcggactgagccagaacaaaccctcctccaacagcctgcgtctcagc
atcttcacccccagcgtcctgatgatctccaaacacgcagacggctcgcttaaccagtgg
gccgtcagcttcgccgaggactcggccttctccacagtgctcagtgtgtctcataagtca
cgatactgtggccaccgcttccacctcaacgatctggcctgccactctctgctgccgctg
ctgctcaccacctctcaccacaacgccctgaggacacccgacggggacaccgctctgacc
cgtcctgctgctgccccgtcccgcaggagcagaatgtcatccggcagcgttgcccaggat
cccaacgcgatctacagtgagctgatcctgtggcgggtggatccggtgggtccgctgtcg
tactcggggggcgtgtcggagctggccaggatcaactcgctgcacacgtctgccttctct
aacgtggcctggctgccaacgctcatccccagcaactgcctcggtgtgtatgggaactca
cccagtgcctgcttcatcgccagtgacggacactcgctccgactctatcaggccatcatt
gaggccaaaaaactgctgagtgaactctccaaccccaacatctccaaatatgttggagag
gtgtttaacatcatcagccagcagtcgacagccagaccaggctgcatcattgagcttgat
gccatcacagactttcaggggaaagagacgcagctgctgcatgtgtttgaggaggacctc
atcttgggaaatgagaaaatagacgattacctgcaggattctgttcccagccggacgctc
ttctccgctcgcttcttcctggtggtggtggagatcactcagagcagcaggtcgctcctg
cacatgtggcacctgcagctggacgcagttcccgtcgttatggagcaaactcaaactcca
aacaaagagactctgtctccatcacccgtgaacagctcacagtttaactttgagacggcc
ggctcaccacaatccccgagacccaagctgaacacgtctaacctccagagcgcctgccgc
cttgctctgaccagtacgaaagtcttcagccaggagctggatctgccgcagggcgttgaa
gtcatgcgtgtatcacctgctgcaggtcatttgagcgcctcgtctctgcagccggccgga
cgctctccgtatctgctggccacgtcctgctcagacgggtccgtccggttctggaggtgc
agctccgtctctgaccctgatggctctgctgacccgtcatacgtctgggaggagtggcct
ttgcttgtggaggagggcgaggccagcagcagcgctctgagtgtgtccggtcagctcatg
ggtctcagctgctgtcacaccagcagagtcgcagtcgcgcaccggagccacgaacccatc
atgcacatcagcatcttccagtgcgactccaccggaggctcccagtggattctggagcag
acgcttaaagtctgtagctccgacagcccgagtgctaacgactatttgagtaatggttgt
tcagttgtcggcagtaagaggcaggtccacttagactgggtttccagagaagatggttct
catatattaaccgtgggtctgggatccaaacttcacatgtacgggatgctttctggaaaa
cctcccgatctgggtctgtctgatcgcagtaaggagtgcagctgctctcgattggtgctc
ctccgagtggtggatctggtgtcgtcggttgagggttcgctacccatccctgtgtctctg
tcttgggtgcgagatggcatcttagtagtcgggatggactgcgagatgcacgtctactcc
cagtggcagccgccggctccggtcaaactgtcacgcactggtagcgtgacatcgcttaat
tcagtggtgaagaacgagggactcagtctgaatccttctaaaaagaccctcaccagatcc
atgactagtttggcccagaaactcagtggaaagagaaccgtgtacgacctcccggcggag
atggaggattctgggttgtttgaggcggcgtataacctgtttcctactctgccccagtat
catccagtgcagctgttggagctcatggacctcgggaaggtgcgccgggcaaaagccatt
ctgtcccatctggtaaagtgcattgctggggagatcgtgtctatgaaggacactacgatt
aaccaggagcggcgtctgcgctcgctcaccatcagcgccagcggaagcaccgccagagac
ccgaagatgttcagcaaagctgagagctccgactacaccgagatcgactccatcccgccg
ctgcctctgcatgcgctgttagccgccgacgaggagacggctcctagtgccaaagaaaga
tcggagagcgtgagcgctcatggccaaagcgacacttatgacgagctcttccagacctcc
ggcgtcagtacagatgacatggaccctttcgatggagatgaggaagatgcaaacgctaaa
gtcattgatctgtcaaagtacagccctatgttcttcggctccgaacatgcacaggtgtta
tctggacacctgcttcactccagcctgccgggcctgacgcggatggagcagatgtctctg
atggctctggcggacaccatcgcttccaccagcacccacattggagaaagccaaggaaaa
ggtcaaggtggagagacgctggatgaatgtggactgaagttcctgctggccgtacgtctg
cacaccttcctcctgacgtctctgcctccggctcatcgcgctccgctcctctgtcaagga
ctgtccacctgccactacgcctgggcgttccactccgaggccgaagaggagctgctcaac
atgcttccggtcctgcagaaaggagagcccacgtggccggagctgagagccatgggtgtg
ggctggtggctgaggagcaccaacaagcttcggagatgcattgagaaggtagcaaaagct
gcttatcagagaaacaacgacccgttagacgcagccttgttttatctggccatgaagaag
aaagctgtggtctggggactgtacaggtctcatcataacgtgaagatgacggcgttcttc
agcaataacttcagtgaggaccgctggaggaaggcagcgctgaagaacgctttctctctg
ctcggaaaacaacgtttccagcattctgcggctttctttctgctggccggatccctgaaa
gatgctgttgaggtttgtatagagaagatgcaggaccttcagctggctctggtggtctgt
cggctgtacgagtctgagtttgagatgtcctgcacttacaagcgaatcctgcagaggcac
gtcttgggtcaggaccaccagatcgcggcccatcaggaccctttcttacgcagcatggca
tactgggtcttaaatgactacagcagggctttggacacactgctcgagcccaatgcagac
acgtcacatgaaggaagcgccgggtcatctccttatagtcctgatgtttttaacttctac
acctacctccgcacacacccgctgctgctgcgccgtcacttcggctcctgtgataaagct
aaagtgggtctgaccgctgaaggccgtgcggtcgactccatcagcctcacagagaggagg
ctcttctttaccgccgcttatgcacacttacaggccggctgccccatgctggctttagaa
gtgctctccaaaatgccgaaggtcgtgaagcgctcaccgatgcgagagagttcgcctgtg
acgtcgagcgagcacaaagaccaggcctcggctccgtggccggttctcaacggcttggag
tctgtgtcctcgctctcgtctcctagagaggacagtcggtcagactcggtgctcagtttc
gactggagccagccgtctgtcaccctgcaggacgagcctctggagctcaagtgggacagt
gataaagaggacttggacgaagaagaatcaggcctggcgatgaagaccatctgtccggag
aaggacggcagcgcttctcgagacgctccggaggtgacgtccacccccacgggtcacagc
acagacgattctccggcgctgaccgaggacatcctcgccgcgcagctgaagttcagctcc
tgtctgaagatcctcaccacggagctgcgcacactctccacgggatacgagctggacgga
gggaagctgcggcatcagctgtgtcactggctggagcgagccgtggcggcgctgcagagg
tgctgcggatacaaccccttcctccagcacctgcccgagggcatctcagctgacctgagc
caggtggaggatctagaggagcggggcgcggcggagcaggccagagagctgcagcagcgg
cgaagactgtggctgaagaggaaccagccgctgctgcgcatcttcctgagctactgcagc
ctgcacggctctcacggaggaggactggcctccgtcaggatggagctcattctgctgctg
caggagtcccagcaggacgacagtctgcagatctccgctcccgctccgcagcacctgtct
gctcctcttttcctggcatggaccgccatctccaaaacggtggtggccaatcccatagtg
cacctgaccaacctcacgcacgacatactgcacaccatcaacgctctggacgcacctccg
cacccggatgtcgtcagcaatgagatctacgtgatgcacacgctggccgcttccctgtcc
gcctgcatctatcagtgtctctgtgacggacacagctacagccatgtgaatccgttcacg
ggcatcacctaccagagcgtcctgctttcccatcagcccccggtgaggagcgtcagcatc
gaggaggccgtcctgcccaacacctctcctgcgcagtggcctggtgtgagcgtcctgatg
cagctgctgagcgcgtctggagacgagaaccagcctggtctgcccgtgcttctgtgtgag
atcctgaccgcagtcttcctcagcctcttcgtccacggtctggccactcactccagccac
gagctcttccgcatcgtcgctcacccgctcaacagcaagctgtgggtggccgtgttcggc
ggcggcgctcgtgtccctgtgctggagaaacccagctcacccacagtggaagatgcggag
cggaagcagcggcgtttgcggctgagctcatcacgcagtaactccagagaggttcccgac
agtccggtcagtcccagacccgtggtgatggagagggaaacatccgtctgtaaagagcgt
ttcgtgccgcctgaactcagcatctgggattatttcatcgcaaagccgtacctgcctccg
tctgccagccgagtggagtacgactctgaggagagccagggcagtgaggacgaggaggat
gaggaagatgaggacgaaggagatcccaactctccgcaggcagagcattccaacaatagc
tcgtacagctggtgtctgatgcgcttggccatggtgcagctggtcctgttcaacctcaag
accttctacccgatggcgggtcacgacctcttagatctgcccgtgtgctcgccactctgt
catgccgccctcaagacgctccagcgttgggagcagctgctgctcaagaggctggagatt
ttcggaggtcctccgtcgaggttcatctgctcgcagctgctggaggagagcgtgtcgttg
ggtccggcgctgctgcggcacaaggctctgttcgagccctccaacacgcccttcaggtct
cgccggcgcgacgcacttcctgtcagacggctgtggcagtatctggtcaaacaggaagag
gttcaggagatgttcatacgcaacatcttcaccaagaaacgcgatcagaacgaggagact
gaccgtgtcaaatgttctgtgccgctggagtccacacacaaccagatcgaggctgaccag
gggtttcctggaggaaaagctcgcatcatccacaaggagtctgacatcatcacggcgttc
gccatcaataaggccaaccgcaactgtttagtgatcgcctccacccacgacatccaggag
ctggacgtgtcctccatcctctccacgcagatcctgacctgggtcgatgaggagaacgag
gccgaggtcaaagggacggatgagttcctggtggttcacgcgcgggacgacttcagcgcg
ctccacagcagcacaccctacacccgcagcagccccgggacccccatcaacatgccctgg
ctgggcggcctgcagacgggacgaggagccgctgtgctcatcaaacgcaacatcaacaac
gtgcggcggatgacgtcacaccccacgctgccctactatctgaccggagcgcaggacggc
agcgtgcggatgtttgagtggggtcactcacagcagatcacctgcttcaggagccccggg
aactccagggtcaccaggatacgcttcagttatcagggcaataagtttgggatcgtggat
gcggacggagcgctcagtctctggcagaccagcacctcaggaaacgctcccaaaccctat
ctgacgcttcagtgtcacaataagaccgcgaatgactttgtgtttgtgggatcatcatct
ctcatcgccactgcaggcctgtccacagacaacaggaacgtgtgtctgtgggataccctg
gtcacgccagcatacagtctggttcacggcttcagctgtcatgagtccggctccacggtt
ctggctttggcgtctaaacagcagctgctgctcagcggaggtcggaggggctggatcagt
gtcctggacctcagtctgaagatccagcgccagagtttccaggcacacgactcgcccgtc
aaagcgctggccgtcgacgccagcgagagctgcttcatcagcggatcggccgagggcaac
atcaaggtgtggagcatgtgcacccagagcctcctgcacaccttcagtaatgaacacgct
cgccagtcactcttccgtaacctgggcacaggtgtcatgcagatcgagaccggcccagcc
aatcacatcttctcctgcggcgcagacggcacaatgaagctccgcctcctgcctgacgct
ctgagcctctactgcagcggcgtgaagaacgacgtcaggtttatcatgtag
DBGET
integrated database retrieval system
