Cyprinus carpio (common carp): 109101396
Help
Entry
109101396 CDS
T05134
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
ccar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109101396
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109101396
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccar01009
]
109101396
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109101396
03036 Chromosome and associated proteins [BR:
ccar03036
]
109101396
Protein phosphatases and associated proteins [BR:
ccar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109101396
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109101396
SWI/SNF complex
109101396
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109101396
PBAF complex
109101396
SWI/SNF complex
109101396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
109101396
NCBI-ProteinID:
XP_042618381
Ensembl:
ENSCCRG00000000211
ENSCCRG00000037222
UniProt:
A0A9R0B374
LinkDB
All DBs
Position
A8:complement(15065039..15069073)
Genome browser
AA seq
373 aa
AA seq
DB search
MALSKTYGQKPIKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLSRRLATVEERKKI
VASSHDHGYTTLATSVTLLKASEVEEIFEGHDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQPEILVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQIESYPTDS
ILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPETFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagcaaaacatacggacagaaacctattaaattccagctggaggaggatgga
gaattttacatgattggatcagaggtgggaaattacttgcgtatgttcagagggtcttta
tataagcgctacccatctctctcgagaagactagcgacagtagaggagagaaagaaaata
gtagcatcatctcacgatcacggttacaccactttagccaccagtgtgacgctgctgaag
gcctccgaagtagaggagatatttgaggggcatgacgagaagtacaaggctgtgtccatc
agcactgaacctccagcctatctcagggagcagaaagccaagagaaacagtcagtgggtg
cccactcttcccaatagttcccatcatttggacgctgtgccttgctccaccaccattaac
cgcagtcgactgggacgtgacaaaaaaaggactttcccgctctgctttgatgatcatgac
cctgcagtcattcatgagaatgccactcagccggagatcctggtgcccatccgtctggac
atggagattgacgggcagaagctgcgtgatgctttcacatggaacatgaacgagaagcta
atgactccggagatgtttgctgaaatcctttgcgacgatctggatctgagcccactgacc
tttgttccagccattgcctcggccatcagacagcagatagagtcctaccccacagacagc
atactggatgagcagatggaccagagagtcatcattaagttaaacatccatgttgggaac
atttctctggtggaccagtttgaatgggacatgtctgagaaggagaactctcctgagacg
tttgctctgaagctgtgctccgagctgggcctgggaggagaatttgtcaccactattgcg
tacagcattcgcggtcagctcagctggcatcagaggacctacgccttcagtgagaacccc
ctccccacagtggagattgccatccgaaacacaggtgatgctgaccagtggtgtccactg
ctggagacactgacagatgctgagatggagaagaagatcagggaccaggacagaaacaca
aggcgaatgagacgacttgcaaacacggccccagcatggtga
DBGET
integrated database retrieval system
