Cyprinus carpio (common carp): 109101407
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Entry
109101407 CDS
T05134
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109101407 (npas4l)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109101407 (npas4l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_4
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
109101407
NCBI-ProteinID:
XP_042625523
Ensembl:
ENSCCRG00000015336
UniProt:
A0A9R0B843
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Position
A13:28741220..28745561
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AA seq
593 aa
AA seq
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MSVGCDTSVRRILRASQRFRSTKGASKARRDHINGEIRNMRALLPISAEDQERLSYLHSM
SLICTYVRKTVLLQGVHQDAAGVSPLYESFLQALPGFIVALTRDGKLVYVSENVPEYLGL
SMVDVLQGDTFYDMMDSRDAEAVKVVLREQAVSAERSFVCRMHTSKAFRLQYGSCCSMLV
RGRFQAGPPDTALFVALCTPTVDRMKDSELLRASACFQTLHRPDMRLTHAPYSVLFHLGF
SAEELIGRSWYELLHPDDLTLAAGCHQTLTRGDGDADGEMLVRLLCKDLSWIWLYVCVAV
DRAREVITCTNHVLSEAEAVYLKDKLYGALASQRPVHSAQRPRERETVRRSSETSDCSGG
TDGELRSTSLTVREQLAFSTPPYSPTSSHSSDFLSDGYGTFEQLTDGFCPSQAFSDPSCG
VPPVCLPDAHLVPIYRPVLDVCEAAADCVLHPEDFSVFPLPHSDNLLTPEASPTADGRFL
YSETERAEIGTLAHQIRSLASSFDAYSTTRHLQPDGALCWPPAPELLLDETVIDSILRDL
VSAKEPDCVWSRSAAGAFSAQQCRQISAELQQLHQCVYRSDAALTLTDQSIND
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcggctgcgacacgagcgtcaggcggattctccgcgcgtctcaacgcttcagg
tccactaaaggggcgtccaaagcccggcgagaccacatcaatggagagatccggaacatg
cgggcgctgctgcccatctcagctgaagaccaggagcgtctgtcctacctgcactccatg
tctctcatctgcacctacgtcaggaagaccgtgctcctccaaggtgttcaccaggacgct
gctggagtttctcctctctatgagagttttctgcaagcgctgcctggatttattgtcgct
ttgaccagagacgggaaactggtctacgtgtctgaaaatgtgccagaatacctcggcctg
tcgatggtggatgtgcttcagggagacactttctatgatatgatggacagtcgtgatgca
gaagccgtgaaagtcgttttgagagagcaggcggtctccgcagagcgcagcttcgtgtgc
cgcatgcacacctccaaagcgttccggctccagtacggcagctgctgctccatgctggtg
agggggcgattccaggccggcccgccggacaccgctctgtttgtggccctctgtacgccc
acagtcgacagaatgaaggacagcgagctcctgagggcctcagcctgcttccagacgctc
cacagaccggacatgaggctcactcacgccccctacagtgtcttgttccacctgggtttc
tcagcagaggagctgattggtcgatcatggtacgaactcctgcatcctgatgacctcacg
ctcgccgccggctgccatcagacactcactcgcggtgacggcgatgcagacggagagatg
ctggtgcgtctgctgtgtaaggatctgtcgtggatctggctctatgtgtgtgtggctgtg
gacagagccagagaggtgatcacctgcaccaatcacgtcctcagtgaagcggaggcggtg
tatctcaaagacaaactctacggcgctctggcgtctcagcgtcccgtccactcagctcag
agaccgagggagcgtgagacggtcaggagaagctcagagaccagcgactgctccggcggc
acagacggggagctcaggagcacctcgctcacggtcagagagcagctcgccttctccacc
ccgccctacagccccacttcctcccactcctctgacttcctgtctgatggctacggcacg
ttcgagcagctgacggatgggttctgtccgtctcaggcgttctctgacccgtcctgcggc
gttcctccggtctgtctgcccgacgctcatctcgtccccatctaccggcccgtgctggac
gtctgtgaggctgcggcagactgcgttctgcatccggaggacttcagcgtgtttcctctt
cctcactctgacaatctgctcacgcctgaggcctcgcccactgctgacggacgcttcctc
tacagcgagacggagcgggccgagatcgggactctggcccatcagatccgctctcttgcc
agcagcttcgacgcctacagcacgacacgccacctgcagcctgacggcgccctctgctgg
ccgcccgcgcccgagctgctgctggacgagaccgtcatagacagcatcctgagagacctg
gtctcggccaaagagccggactgtgtctggagccggagtgcagccggagcgttctcagcg
cagcagtgccgtcagatcagcgccgagctgcagcagctccatcagtgtgtgtatcgatca
gacgccgctctgacgctgacggatcaatccatcaatgactga
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