Cyprinus carpio (common carp): 109101576
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Entry
109101576 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109101576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109101576
Spliceosome [BR:
ccar03041
]
Complex C
Other components
Step II factors
109101576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
CdiI_N
Motif
Other DBs
NCBI-GeneID:
109101576
NCBI-ProteinID:
XP_042625977
UniProt:
A0A9Q9YT88
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Position
A14:complement(16515649..16520719)
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AA seq
575 aa
AA seq
DB search
MSKKEGNVKVSEGVVDLEEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQ
YISSVPWYIDPSKRPTLKHQRPQTENEKRFTPIGDWYKRGVQEKPVSTKYRKGACENCGA
MTHKKKECVERPRKVGAKFSGTDLAPDEHEQIQLSMDYDGKRDRWNGYDPDEHMRIVEEY
AKVDLAKRTLKAQKLQEELASGKLMDQANSRKHLIDDAAQDHSSEDEDDDKYVDDFDMPG
QNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYSNTGKNPEEXKRRE
HFFSCWSNIVLCVSSAVFAWEAYEKGSEVHLQADPTKLELLHQSYRVKKDEFKEKQKESI
LEKYGGQEHLDAPPRELLLAQTEEYVEYSRHGAVLKGQEKAVACSKYEEDVLINNHTCIW
GSYWKDGHWGYKCCHSMVKQSYCTGEAGKKVVSNSCIPFEDDEEEAQTSKEPKTLLQVHL
HKKMKDKKKKKKSKKHRDSDSSDEEDEAKKTEKLKKALSAEEQRLKQVSVMMQLDERKRP
YNSLKEVREPTEEEMEAFRMKRCRPDDPMAPFLGQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaggagggtaacgttaaagtgtcggagggggtcgtagatctcgaagagccg
aagaaaatgacccgagaagactggaggaagaaaaaagagctggaagaacagagaaaatta
ggaaatgctccagctgaagttgacgaggagggaaaggatatcaaccctcatattccccag
tacatctcatctgtcccttggtacatcgacccatcaaagagacccaccctcaagcaccag
agaccccagacagagaacgagaaacggtttacacccatcggagactggtacaaaagaggt
gtacaagaaaaaccagtcagcacaaaatacagaaaaggagcatgtgaaaactgtggtgcc
atgacacataagaagaaagaatgtgtggagagacccagaaaagttggcgcaaagttttct
ggcacagacttggcaccagatgagcacgaacagattcagctctcaatggattatgatgga
aagagagatcgctggaatggctatgatcctgatgagcacatgcgcattgtagaggaatat
gcaaaagttgatctggctaagcgtactctcaaagctcagaaactgcaggaggagttagct
tctggtaaattaatggatcaagctaattcaaggaagcatcttatcgatgatgcagcacag
gaccacagcagtgaagatgaggatgatgacaaatatgttgatgactttgacatgcctgga
caaaactttgattccaagagacgaatcacagttagaaacctgagaatccgggaggacatt
gctaagtatctcagaaatctggatccaaattcagcctactatgatcccaagactcgagct
atgagggagaacccatactccaacactggaaagaatccagaagagtagaagcgacgggaa
cactttttttcgtgttggtctaacattgttttgtgcgtctcctctgcagtctttgcttgg
gaagcctatgagaagggatctgaagttcacctccaggcagatcccaccaagctggagctt
ctccatcagtcctacagagtcaaaaaggatgaattcaaagagaaacagaaagagagtatt
ttggaaaagtatggtgggcaggaacacttggatgccccaccacgagagcttctgctggct
cagacagaggagtatgtggagtattctcgtcacggagctgtgttgaaaggacaggagaag
gctgtggcctgttccaaatatgaggaggacgtgctcattaataaccacacgtgtatctgg
ggatcgtattggaaagatggccattggggttacaaatgctgccactcaatggtgaagcaa
agttactgtacaggagaagctggcaagaaagtagtgagcaattcttgtattccatttgaa
gatgatgaagaggaggcccaaacgagtaaagaaccaaagactcttttacaggtacattta
cataaaaaaatgaaagacaagaaaaagaagaaaaagagcaagaaacatagagattctgac
agcagtgatgaggaagatgaagcaaaaaagacagaaaagctgaagaaggcattgagtgcg
gaggagcagaggctgaagcaggtgtctgtaatgatgcagctcgatgagaggaagcggccg
tacaacagcctaaaggaagtgcgtgaacccacagaagaggagatggaagccttccgcatg
aaacgttgccgacccgatgaccccatggcccctttcctggggcagtga
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