Cyprinus carpio (common carp): 109101702
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Entry
109101702 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109101702
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109101702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109101702
NCBI-ProteinID:
XP_042586459
UniProt:
A0A9Q9WN38
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Position
B9:complement(25036375..25059548)
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AA seq
902 aa
AA seq
DB search
MKALPAETVRLLCSSQVITSVLNVVKELVENSLDAGSSSLEVKLENYGLDRIEVRDNGSG
IKATDVPVMAVKHYTSKISCHEDLERLETYGFRGEALASLCAISEVVITTRTADDEFSIQ
YSVDHNGQIVSQKPSHLGEGTTVCAANLFKNLPVRRQYYSNTKKCKEELKRVQNLLMAYA
VVKPELRITLSHNKAVVWQKSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEIGIDGFF
PKPGSDFNSTSSSTPDKTFIFVNSRPVHHKEILKLIKQYYSSAQSNKESANRRYPFLMMN
ITIPASTVDVNLTPDKTEVMLQNKEGVLLAVETMLISLYGYSIDNDDLKTGGSRPGVSSV
DVPEHTNVVPTPTTDVRLDEPELLEISPTNADKQDGELSLSNTANTSSSSISEDWVINRS
SSDFDSINSSLPADDVVMNSTADLNCNSPKASKSDSGPGQESIVSAESWSTGKAFSNQVT
GECLEPVKLHVPKAHEDLGGSTRSSPSKRPSNVIMEKMAKLTAYELISNRSVRQPSSAFS
LFEQDTRSQVLQENPRASPQDVTTAVKERWESLGEEDRKKYESKAEKSLNAYNLQRKRAA
EGGGQCGEGKKQMSAESSLNKAQGVKRKAPLANQQALDKLFSSQPSSKRSPAKLSKPLPF
SIATLKQSLNLLSYQNRSSAQGLRLVNRLASHGAWVVLCGKKLMLLNPFRVEEALLFLML
LENYVVNIVRMVRLVKLVDVVLGGPEYMEVLLNMEKDSACFNGDIYFTDPRLVANGFEIK
MIPGSLSSERHVEVTGMADCMPFFGIGDLREILQAIKVRDAKTVEQCRPLKVSNYLESEA
VRLARQLPLNLTRADVTNTLCRMKQELEEESQACIHRRPFFHDLVTVPETEEDALQIMSN
SC
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcttccagctgagactgtgcgtctgctgtgcagctctcaggttataacatct
gtcctgaatgttgtcaaagagctggttgaaaactcccttgatgcgggttcctcaagcctc
gaagtcaaactggagaattatggactggatcgcattgaagtcagagacaatggttctgga
atcaaagctactgatgttcctgtgatggctgtaaaacactacacatctaaaatctcctgc
catgaagacctggagcgcctagagacttacggcttcagaggagaggctctggcatcctta
tgtgccatatcagaggtggtaattacaaccagaaccgcagatgatgaatttagcattcag
tattcagtcgatcacaatggacagatcgtttctcaaaagccatcacatcttggcgagggt
accactgtgtgtgcagcaaatctgttcaagaacctccctgtcagacggcagtattattcc
aacactaagaaatgcaaagaggaactgaagagggtgcagaacttactcatggcctatgct
gttgttaagcctgagttaaggatcacattgagccacaacaaggctgtggtctggcagaag
tccagggtgtcggatcaccgaacggccctcatggccgtgctcggagcagcctctgtagcc
aacatgctccctgtccagcatcaccaggagcaaccagagattggcattgatggattcttt
cccaaaccgggctcagattttaattccaccagctcctctacgcctgataaaacattcatc
tttgttaacagtcgacctgtgcatcacaaagaaatacttaagcttatcaaacaatactac
tccagtgcccaatctaataaagaatctgcaaaccgccgctatccctttttaatgatgaac
atcaccatacctgcctcgactgtggacgttaacctgacacctgataaaactgaagtgatg
ctacagaacaaggagggagtcctgttggcggtggagactatgctaatctccttgtatggg
tactccattgacaatgatgatctcaaaactggaggaagtcgccctggtgttagttctgtg
gatgtacctgagcacactaatgtagtgcctacacctaccactgatgttagattggacgaa
ccagaattacttgaaatttctcccacaaatgcagataaacaagatggggagctatccttg
agcaacaccgcaaacaccagctcctcttcgatttcagaggattgggtgatcaacagaagc
tcaagtgattttgacagtattaattcctcattacctgctgacgatgttgtaatgaactct
acagctgatctaaactgtaactccccaaaggcgtctaagagtgacagcggccctggtcaa
gagagcattgtatctgctgagagctggagcacgggcaaggccttctcaaatcaagtcacc
ggagaatgcctagaacctgtgaaactccatgtcccgaaagcacacgaagacctcggagga
agtacgaggtccagcccgtccaagaggccttctaacgtcattatggagaaaatggccaag
ctgacagcctacgagctgatcagcaaccgctccgtgcgtcagccctcgtctgccttttcg
ctgtttgagcaagacaccagatcgcaggtcctccaggagaacccaagagccagtcctcag
gatgtcacaactgctgtgaaagagagatgggaaagcctcggggaggaagaccgcaagaag
tatgaaagcaaggcagaaaagtctctgaacgcctacaaccttcaaaggaagagggcagcg
gagggaggtggccagtgcggagagggcaagaagcagatgagcgccgagtcttcattgaac
aaagctcaaggcgtgaagcgcaaggcccccctcgccaaccagcaggccctggacaaactc
ttctcctctcagccctcgagtaagaggagccctgccaagctctccaaacccctcccgttc
agtatcgcaaccctcaagcagagtcttaacctcctctcctaccagaaccgctcaagtgcg
cagggcctcaggcttgtaaaccgcttggcttctcacggtgcctgggtcgttttatgcggc
aaaaagctcatgctgttgaacccgtttcgagtggaggaggccttgctgtttttgatgctt
ttggagaattatgtagttaatatagttaggatggtgaggcttgtgaagcttgtagatgtg
gtgcttggtgggccagagtacatggaagttctcctaaacatggagaaagacagtgcctgc
ttcaatggagacatctactttactgatcctaggcttgtggcaaatggttttgagatcaag
atgattccaggttctttgtcctctgagaggcatgttgaagtgacgggcatggccgactgc
atgcctttcttcgggataggagacctgagggagattctgcaggctataaaggtccgggat
gcaaaaaccgtggagcaatgtagacctctcaaagtctcaaactacctagagagtgaagct
gttagactagctagacagttacctctgaacctcaccagagctgatgttacaaacacgctt
tgccgaatgaaacaggaacttgaagaggagagtcaggcctgcattcacagacgaccattt
tttcacgatctggttactgttcctgagactgaggaggatgctctgcaaattatgtctaat
tcttgctaa
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