Cyprinus carpio (common carp): 109101953
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Entry
109101953 CDS
T05134
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04210
Apoptosis
ccar04218
Cellular senescence
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04623
Cytosolic DNA-sensing pathway
ccar04625
C-type lectin receptor signaling pathway
ccar04920
Adipocytokine signaling pathway
ccar05132
Salmonella infection
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109101953 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109101953 (nfkb1)
04218 Cellular senescence
109101953 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109101953 (nfkb1)
04621 NOD-like receptor signaling pathway
109101953 (nfkb1)
04622 RIG-I-like receptor signaling pathway
109101953 (nfkb1)
04623 Cytosolic DNA-sensing pathway
109101953 (nfkb1)
04625 C-type lectin receptor signaling pathway
109101953 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
109101953 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109101953 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
109101953 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109101953 (nfkb1)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109101953 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
109101953
NCBI-ProteinID:
XP_042625895
Ensembl:
ENSCCRG00000015021
UniProt:
A0A9Q9YUB4
LinkDB
All DBs
Position
A14:14240513..14266445
Genome browser
AA seq
968 aa
AA seq
DB search
MCQLCVYVTERGISWGFVVSPLSVDSIALIIKGIMAGEDPYHGVYMEPIAPFSDDTIWMT
MDPTTFPGIHNNNVMRTVDGPYLRIVEQPKQRGFRFRYGCEGPSHGGLPGASSEKNRKSY
PQVKICNYQGAARVVVQLVTHSTETHLHAHSLVGKQCDKGICIADLQSKDSSISFPNLGI
LHVTKKNVSKVLEERMIEAYRMGYNYGISIHPEIDALQGEVRMPRELTDTERNLISSASI
HQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVISDPIFDSKAPNASNLKIVRMDRTAGC
VTGGEEVYLLCDKVQKDDIQVRFYEEDESGLTWEAYGDFSPTDVHRQFAIVFKTPKYRDQ
NLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRKRQKTLPNFQDYSGAGGGAG
GMFRGGGGGSTAGGGPSGGGGHYFQGYQTYNNYGPGYNFSSGMGGGGTTIKHAYQEPVED
SDEDSDSDTDNDQAAGGVVRICAHPEPIDLGVASEDTEPTENLELNTTCCVLEPHLAELA
GRQAQALFHYAVSGDARMLLAPQRPLMTTQDENGDTGLHLGVIHSQTDAVRNLAQVISAL
PGEGILNMRNDLYQTPLHLAVLTQHKEAVEALLEAEVDVTLTDRHGNTALHLAAQQKEDS
VLRLLLKYKSVSQLTSIPNTAGLCPLHLAVQANSLSCVRALLDGGADVDVQEITCGRTAL
HLATELGNLSLAGCLLLEGNAYVDSVTYNGSTPLHIAAGRDSTKLCALLMAAGADPHKEN
FEPLFFKEDELCGTCEEEEEEDEGYIPGTTPMNMATSPEVYDILNGEEYQLTTTVVPPQG
DMKSLSSDTKQELCQALEGQTGGWESLAHALGLGILTSAFRLSSCPAGKLLDSYEVSGGT
VRELVEGLKHVGNSSAVSLLQAMCKEPEAVHTTPQLTGLGLCKSIQGLTLGPHQEESGIC
DSGVETSF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagctttgtgtctatgttacagaacgaggcatcagttggggatttgtagtgtcc
ccgctcagtgtagacagcatcgctctgattataaaaggaatcatggctggagaggatcca
taccatggagtgtacatggaacctattgcccctttcagtgatgacacaatatggatgacc
atggacccgacaacgttcccgggcatccacaacaataatgttatgaggacagtcgacgga
ccttatctgcgaattgtcgaacaaccaaaacagaggggcttcaggttccgctatggatgt
gagggcccctcccacggaggactcccaggggcctccagtgagaagaacaggaagtcttac
ccacaagtgaagatctgtaactatcagggtgccgctcgagtggtagttcagctggtgacc
cactccacagagacccatcttcatgctcacagcctggtgggcaaacagtgcgataaagga
atctgcattgccgacttgcagtccaaagattcaagcatcagttttcctaacttgggcatt
ttgcacgtgacaaagaagaacgtaagtaaagttttggaagagaggatgatcgaggcctac
aggatgggatataactacggcatatccatccatcctgagattgatgccctacaaggagag
gttcgcatgcccagagaactcacagatactgagaggaacctgattagcagtgcatcaatt
catcagtcaaaggagatggatctgagcgtggtacggctcatgttcacagccttcctgccc
gacagtgacggagggttctcccgccgactggaaccagtcatttcagaccccatctttgac
agcaaggccccaaatgcctccaatctgaagatcgtgcgtatggatcggactgccgggtgt
gtgacgggaggagaggaggtctatctgctgtgtgataaagtccagaaagatgatatccag
gtgcggttttatgaagaagatgagtcgggtctaacctgggaggcctacggggatttctcc
cccaccgatgtccacagacagtttgccatcgtcttcaagacacctaaatatcgggaccag
aatctccagaagcccatctctgtgtttgtgcagctaaaaaggaagtcagacaatgaaacg
agtgaacccaagcctttcacctaccatccacagattatagacaaagaagaagtccaaaga
aagagacagaagacactgccaaactttcaggactacagtggagcaggaggaggagctggg
ggcatgtttagaggaggagggggtgggtctacagcagggggcggtcccagtggaggagga
ggacattacttccagggatatcaaacctataacaattacgggcctggatacaacttctcc
tcaggcatgggaggaggcgggaccaccatcaagcatgcgtatcaagaaccagtggaagac
agtgatgaagacagtgatagtgataccgataatgatcaggcagcaggtggggtggtgcga
atctgtgcccatcctgaacctattgatttgggagtggcaagtgaggacacagagcctaca
gaaaatctggagttaaacaccacatgctgtgtgttagagccgcatttggctgagctagct
ggaagacaggctcaagctctctttcattacgcagtaagcggtgatgctagaatgcttctg
gctccacagcgccccctcatgaccactcaagacgagaacggagacacgggtttacatctg
ggagtgatccatagtcagacagatgccgtgcgaaatctagcacaagtcatctcggctctc
cccggagagggcatactcaacatgaggaatgatctgtaccagactcctttgcacctagca
gtgttgacacagcacaaagaggcggttgaggccttgttggaggccgaggtggatgtcaca
ctcacagatcgccatggaaacacggcacttcacctggcggctcagcagaaagaggatagc
gtgctgcgattgctgctaaagtacaaatcagtgtcacaattaaccagcatccccaacaca
gcaggtctctgtccgcttcacctggctgtacaggcaaacagtttgagttgtgtgcgagcc
ctgctggatggcggggcagatgtggacgttcaggagatcacatgtggccgcacagcactt
cacctggccacagagctgggaaacctttcccttgccggctgcctcctgctggagggtaat
gcatacgtagacagtgtcacctataatggttcaactcctctgcacattgctgcaggacgt
gactcaaccaaactgtgcgcgctcctgatggctgcaggagcagatcctcataaagaaaac
tttgaaccactgttcttcaaagaagatgagttgtgtggtacatgtgaggaggaggaggag
gaagatgaaggctatattcctgggacaacccctatgaacatggcaacctccccagaggtc
tatgacattcttaatggagaagagtatcagctcaccaccactgttgttccaccacaaggt
gacatgaagagcttgagctctgacacaaagcaggagctgtgtcaggccctggaaggacag
acaggaggctgggagagtctggctcatgctctggggcttggcatcctgaccagcgccttc
agactcagctcctgccctgctggaaagctgctggacagctatgaggtgtctggaggaacg
gtgcgtgagctggttgagggactgaagcatgttgggaacagcagcgctgtcagtttactc
caggccatgtgcaaggagcctgaagctgtccacaccacgcctcagctcacaggtctaggg
ctctgtaagtccattcagggtttgacactgggcccccatcaggaagagagtgggatatgt
gacagcggggtggagacctctttctag
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