Cyprinus carpio (common carp): 109102001
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Entry
109102001 CDS
T05134
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecule (CAM) interaction
ccar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109102001
04517 IgSF CAM signaling
109102001
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LapA_dom
Motif
Other DBs
NCBI-GeneID:
109102001
NCBI-ProteinID:
XP_042572941
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Position
B1
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AA seq
827 aa
AA seq
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MLARIIFVCSFFAGASFGNTEPNALYGGACKSLCTCEEKDGHLYMNCEDRNISKISDVKV
PSDMPLHLNLYKNDLVELLAEDMDAFKNAVTLHLGLNSIQELEPGVFSALGSLRKLHINS
NFLVMLKEDTFHGLVNLEYLQADTNFIRVVEPGAFSKLVRLKVLILNDNSIEFLPSNIFR
FVPLTHLDLRGNKLQTLPYVGFLEHIGRIMELLLEDNNWMCNCEILHLKVWIENMRAQSS
IGEVVCNRPEDLRGISLARVKRDLLCPSHADINLEEPSKSLDMVVTPSTKVVQIPNVNDG
TKVPTPANGPGTFCVPMCSCPPQSMGFLMHCEDRGIQRISDIGILEQSPTKLFLTGNMIQ
RLFKYDFVTYDSLELLNLANNQIDYIDNETFLSLSNLKKLYLNGNRIEKISATMFLGLHN
LEYLYLEHNVIKDIDAGSFNPLTNLKLLFLNNNLLNTLPAQIFRNVPLVRLNLRKNVFMH
LPVSNVLDQLNYLEQIYLEDNPWDCTCDLVSLKQWVEKLSKDTVIGTILCHTPQKLSTAE
VRNLKHDVLCPGLVTYKSLPGDTKDAIVATPEPGVSTSGFFRSLTEAVPLSVLILSLLIL
FLTFIFCAAGIIVFVLHRRRRHAKKKQFEEQPRENSPIHLHYSMYGQKTTHHVTERQGPG
MYDEPSHSPIVQVCRNPSYCSQHKEYELDEYDSEKPKHICHSILDKESDTLLTGPNVKFR
AVTDYPAEFVSLGDASSLYKNILERERELQQLSLSEYLRKNISQLQPAVDMQVPNHHKEL
KLMETLVYTRPRKVMVEQTKNEYFELKANLHAEPDYLEVLEHQTTFN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgctggccaggatcatttttgtttgctccttctttgctggtgctagttttgggaatact
gagcctaatgcattgtatgggggagcttgcaaatctttgtgcacctgtgaagagaaagat
ggacacttgtacatgaactgtgaagacagaaacataagcaaaatctcagacgtgaaggta
ccatcagatatgcctttgcatttaaacctatataaaaatgacttagtggagttacttgca
gaagatatggatgctttcaagaacgccgtcaccttacatctgggtttaaacagcatacag
gagcttgaacctggtgttttcagtgcactgggatccctaagaaagctgcacataaacagc
aatttcctggtcatgctgaaggaggacacatttcacggcttggtaaatttggaatacctt
caggctgacaccaacttcatccgggtcgtggagcctggggcctttagcaagcttgtccgt
cttaaagttctgatcctcaatgacaactccatagagttccttccaagcaacattttccgc
tttgtgcctctgacacatttggatctgcgtgggaacaagctgcagacactgccgtacgtg
ggtttcctggagcatattggtcgtatcatggagctcctgttggaggacaacaactggatg
tgcaattgtgaaatcttgcatttgaaggtctggatcgagaacatgcgggcgcagtcatct
atcggcgaggtggtttgcaacaggcctgaggatcttaggggcatttctttggctagggtc
aaaagagatttactttgcccctcccatgccgacatcaatctcgaagaaccatcaaagtct
ctagacatggttgtcaccccatccaccaaggttgttcagataccgaatgtcaatgatggc
acaaaagtacccacacctgcaaacggcccagggacattttgcgtgccaatgtgctcttgt
cctccccaaagcatgggtttcttaatgcactgtgaggaccgaggcattcaaaggatatct
gatataggcattcttgaacaaagcccaaccaagttgtttttaacaggaaatatgatacag
cgacttttcaagtatgactttgtgacgtacgacagtctggaacttctcaatttggcgaac
aaccaaatagactacattgacaatgaaacctttctgagtttgagcaatttgaaaaagctg
tacctgaatggaaacaggatagagaaaatctcagcaacaatgtttcttggccttcacaat
ttggaatacttgtacttggagcataatgtcatcaaagacattgatgctggatcattcaac
cctttgacaaatctaaaactcctgttcctaaacaacaatctactcaacactctccctgca
cagatatttcgtaatgtgcccttggtgagattgaacctaaggaaaaatgtctttatgcac
ttaccggtgagtaatgtgttggaccagctcaattatttggagcaaatttatcttgaggac
aatccttgggactgcacttgtgatttggtcagcctcaaacagtgggtggaaaagctaagc
aaggataccgtgataggtaccatcttatgccacacccctcaaaaactgtctactgctgag
gttagaaacctgaagcatgatgttctctgtcctggcttggtcacctataagtccttaccg
ggagacaccaaggatgctatcgtagccacgcctgagccaggggtcagcaccagcggcttc
ttccggtctctgacagaagcagtgccactatctgtgctcatcctcagccttctcatcctc
ttcctgaccttcattttctgtgctgcagggatcattgtgtttgtgctacaccgtcggcgg
agacatgccaagaagaaacaattcgaggagcaacctcgtgagaacagtcccatccacctc
cactacagcatgtatggccagaagaccacccaccacgtaactgaaaggcaaggacccggc
atgtacgacgaaccttcccatagccccattgttcaggtctgcagaaaccctagttactgc
tctcagcacaaagaatatgagttggatgagtacgacagtgagaaacctaagcatatctgc
catagcatcctcgacaaggagagcgacaccctcctcacgggacccaacgtgaagttcagg
gccgtcaccgactaccctgctgagtttgtgagtttgggagatgcaagctccttgtacaag
aacatcttagaaagggaacgggagctccaacagctcagcctcagtgaatatctcaggaaa
aacatatcacagctacaaccagcggtggacatgcaagtccccaaccaccacaaggagctt
aaactaatggagactcttgtttatacaaggccacggaaggtcatggtggaacagactaaa
aatgagtactttgaactcaaagccaacttacatgctgaaccagactacttagaagtctta
gagcatcaaacgactttcaactga
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