Cyprinus carpio (common carp): 109102016
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Entry
109102016 CDS
T05134
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109102016
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
ROBO family
109102016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Pur_ac_phosph_N
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Motif
Other DBs
NCBI-GeneID:
109102016
NCBI-ProteinID:
XP_042595890
UniProt:
A0A9Q9X631
LinkDB
All DBs
Position
B15:complement(24630835..24801899)
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AA seq
1739 aa
AA seq
DB search
MQFGGCNCRPFKSHCLQSLVLLICWYQGYWGATVLPVAQNSLLEDLESVLLPTDTGTQEG
TSSRATEAPTAEHDDDNSPGYTGSRLRQEDYAPRILEHPSDLIVSKGEPATLNCKAEGRP
TPTVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGE
AVSHNASLEVAILRDDFRQNPVDVMVAAGEPAVMECQPPRGHPEPTISWKKDGVTIDDRD
ERITIRGGKLMITNTRKTDAGKYVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLV
DQSVEFRCEAQGDPVPTIRWRKEDGDLPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENM
MGKTEASATLTVHVVSVPPVFVVRPRNQVVGMGRTVTFQCEATGSPQPAIFWQKEGSQNL
LFSSQPPPPSSRFSVSQTGDLTITAVERSDGGYYSCQALNIAGSVITKALLEVTDVISDR
PPPVVRQGPTNQTVAVDGTVVLGCQATGTPTPTILWRKDGVLVSTHDSRLKQLDTGALQI
RYAKLGDTGMYTCTASTPSGEASWKAYLEVQEFGAPVQPGRPTDPNLIPSAPFKPEVTDV
SRTSVSLSWKPNLNAGATPTSYVIEAFSHAAGSSWQTLADHVKTESFVLKGLKPSGVYLF
LVRAANAYGLSDPSPISDAVKTQDVPPTSQGVDHGQIQRELGDVVIHLHNPTILSSSSVR
VQWTVEQQSQYIQGYKVMYRPSPEGTQQWVEWAMFEVRTLGENSAVVTQLKKGVTYEFKV
RPFFNEFQGTDSDIKVARTLEEAPSAAPRGVTVTGSGDNSTTILVSWQPPPEEEQNGVVQ
EYKIWCLGNESRYHINRTVDGSTHSVLIPGLLSGVTYRVEVAASTGAGPGVKSEATSFRL
DSSGRVLPPPVDDDTFSQQISDVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSS
SYAGIRKVPSFTFTPTVAYQRGGEAVSSAGRPGLLNIGEPATQPWLADTWPNSCSNHNDC
PINCCTGSNGNSDSNLATYSRPADCIANYSNQMDNKASNLLAPDTGLYSDVDLSNKINEM
KTFNSPNLKDGRFVGPGGQPTPYATTQLIQSSLANNNVNSSSGGSGGGSADLNEKQSWKS
SQGTPQKQADINTPLQYNVMEQNKLNKDHFRGEGPISGTIPYNQAQDVLTGGTYSSSDRG
SSTSGSQGQKKGGRSTKQFKQNPMNWTELLPPPPVNPPPCQEYTLAMDDSYDTDLQCPLP
PSRMYLQPDELEEEEEEVELERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQPML
QDNPDLHERRYASCNSLTILFFLNHLQFHTFDVCRPPRRLLVSPPPPPRPLSPPHTYGYI
SSPLGLDTDGLEEEEDEEEGDETDAEVARVHQLHTHPHQQHLPQQRALLRGLEQTPASST
CDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVAAAAEYAGLRV
AKHPGKGHHQLPVSGARKYQNLPAGHRPGSPVSTDSNVSAAPGQRRPLKRQKQHPAAQTG
YQRREAYTEDLPPPPIPPPAMLKSPTHPAKTIPEGPRGAMAPRSSSADGKDKRTGSGGPR
PRDGSDNRTSSSERREGQDLQKGQRTGKSSKQDASAGHKSRQHPGSEDILPYSRPSFPAV
HSPRGERDPSSSSSLSSRGSGGRRRGEGAPGARRNPADVGLSTIGAFQTGGEELEMVES
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttggaggttgcaattgcagacctttcaaaagtcactgtctgcagagcctagta
ctgctcatctgttggtatcagggatactggggcgctactgtgttgccggtggcccaaaac
tctttgctcgaggacttagagtctgtgttacttccaacagacacggggactcaggagggg
actagcagtagggccacagaggcccccactgcagaacacgatgatgacaactctccgggc
tacacaggatcccgtctgcggcaggaagactacgcaccccgcattctggaacacccctct
gacctgatcgtatccaagggcgaaccggccaccctaaactgcaaggcggaggggcgaccc
acccccaccgtggagtggtacaaggatggagagcgtgtggaaacggaccgggacaaccct
cgatcccaccgcatgctcctgcccagcggctcgctcttcttcctgcgtatcgtacacggc
cgtcgcagcaaacccgacgaaggctcatacgtttgtgtggctcgtaactacctgggagaa
gcggttagccacaacgcctcactggaagtagctatacttcgagatgatttcagacagaac
cctgtggacgtgatggtggcggcgggtgagccagcggtcatggagtgccagccgccccgc
gggcaccccgaacccaccatctcctggaagaaagatggagtcactatagacgacagagat
gagaggataacgatacgaggaggaaaactgatgatcaccaacaccagaaaaacggatgcg
ggaaagtacgtgtgcgtgggaaccaacatgatgggggaacgagagagtgagatcgcagag
ttgaccgttctcgagaggcccagttttttgcgaaagccgagcagtcagtctgttctggtg
gaccagagtgtggagttcagatgtgaagctcaaggagaccccgtgcccaccatccgctgg
aggaaagaggacggagatcttcccaagggaaggcatgagatctgggaggaccacacgctc
aaactgaagagactgacctcaggagacgccggaacttacacctgtcaggcggagaacatg
atggggaagacggaggccagcgccaccctcaccgtccacgttgtgtctgttcctcctgtg
ttcgtggtgcgacccaggaatcaagtggtcgggatgggccgcaccgtgacctttcaatgc
gaagccacaggaagtcctcagcctgccatattttggcagaaagaaggcagtcagaacctt
ctgttctcctctcaacctcctcctccctccagtcgattctctgtctctcagacaggcgat
ctgaccatcacagcggtggagcgttcggatggaggctactacagctgtcaggctctgaac
atcgctggcagtgtgatcaccaaagccctgctggaggttacagacgtgatctcagacaga
cctccacccgtcgtccgccagggtcccaccaaccagaccgtggctgtggacgggacggtg
gtcctgggatgccaagccaccggcacgccgactcccaccatcctgtggaggaaagacggg
gtcctggtgtccacccacgactctcgcctcaaacagctggacacaggagccctgcagatc
cgttacgccaagctgggagacactggcatgtacacctgcaccgcgtccacccccagcgga
gaggcgtcttggaaggcttacctggaggtgcaagagtttggtgctccggttcagccgggc
cgacccacagatcccaacctcatccccagcgcccccttcaaaccagaagtcacggacgtc
agccgcacctctgtgtctctgtcctggaagcccaacctgaatgctggagccacgcccacc
tcttacgtcatagaggccttcagccatgcggcgggcagtagctggcagacgctcgcggat
cacgtgaagacagagagcttcgttctgaagggtctgaagcccagcggcgtctacctgttc
ctggtgagagcggctaatgcgtacggcctgagtgacccgagccccatcagcgacgctgtc
aaaacacaagacgtcccaccaaccagtcaaggagtggaccatgggcagatccagagggag
ctgggagatgttgtcattcacctccacaatcccacaattctctcatcatcttctgtcaga
gtccagtggactgtcgagcagcagtctcagtacattcagggttataaggtgatgtaccgg
ccgtccccagagggcactcagcagtgggtggaatgggccatgtttgaggttcgaaccctg
ggggagaacagcgcagtcgtcacccagcttaagaagggcgtgacctatgagttcaaagtc
cgacctttcttcaacgagttccaaggcaccgacagcgacatcaaagtggccaggaccctg
gaggaagcgcccagcgctgctcccaggggggtcaccgtaacgggaagcggagacaacagc
acaactattctggtatcctggcaaccgcccccagaggaggagcagaacggcgtggtgcag
gaatataagatctggtgtctgggtaatgaaagcagataccacattaaccgcacggtggat
ggatccacacactcagttctgattcccggcctgctctcaggggtcacgtacagggtggag
gtggcagccagcacaggggccggtcccggggtcaagagcgaggctacgtccttccggctg
gactcgtcgggccgtgttcttcctccgccggtcgatgatgatacgttttcccagcagatc
tcagacgtggtgcgtcagccggccttcatcgcgggcatcggcgcggcctgctggatcatc
ctcatggtcttcagcatctggctgtaccgccaccgcaagaagaggaacggcctcagcagc
agctacgccggcatccgcaaagtgccctccttcaccttcacccccacagtggcctatcag
agaggaggagaggccgtcagcagtgctgggaggccaggtttgttgaatataggtgaacca
gctacccagccctggcttgcagacacatggccgaacagctgctccaatcacaatgactgc
cccatcaactgctgcaccggcagcaacggaaacagcgacagcaacctggccacctacagc
cgcccagccgactgcattgccaactacagcaaccagatggacaacaaggccagcaacctt
ctagctcccgacacgggcctttacagcgacgtggacctctccaacaagatcaacgagatg
aagaccttcaacagccccaacctaaaggatggccgtttcgtgggtcctggtggtcagcct
acaccctacgccaccacccagctcatccaatccagcctggccaacaacaacgtgaacagc
agcagcggcggaagtggaggaggaagtgctgaccttaatgagaagcagagctggaagagc
agccagggaacacctcaaaaacaggctgacatcaacacgccactgcagtataacgtcatg
gagcaaaacaaactgaacaaggaccactttcgaggtgaggggcccatctcaggcaccatc
ccctataaccaggcccaggacgtcctaacaggaggaacctacagcagctccgacaggggg
agcagcacttctggaagtcaaggacagaagaaaggtgggcgatcaactaaacagttcaaa
cagaacccaatgaattggactgaactgttgcctcctcctccggttaatccaccaccatgt
caggaatacacccttgcaatggatgacagttatgacacagacctgcagtgccccttgccg
ccgtctcgtatgtatctgcaacctgacgagctagaagaggaggaggaagaggtggagctg
gagcgcggacctacgcctcccgtacggggagcggcttcctcacctgccgccgtgtcctac
agtcaccagtccactgcgaccctcaccccgtcccctcaggaggagatgcagcccatgctg
caggataaccctgacctacacgagcgcaggtacgccagctgcaacagcttaacaatactt
ttctttttgaaccatttacagtttcatacatttgacgtctgtcgtcctcctaggcgactc
ttggtgagcccaccccctccaccacgccccctctcccctccgcacacgtatggctacatc
tccagcccccttggtctggacacagacggcctggaggaagaagaggatgaggaagagggt
gacgagacggatgcagaggtggctcgagtccaccagctccacacccaccctcaccagcag
cacttgccccagcaaagggctctcctgcggggcctggaacagaccccggcctccagcacc
tgtgacctggagagctctgtcaccgggtctatgatcaacggctggggctcggcttcagag
gaggataatgcctcgtcgggtcgctccagcgccgtcagctcatcggacggatctttcttt
accgatgctgatttcgcccaggccgtggcagctgcggccgaatatgctggtttacgagtg
gcaaagcatcctgggaaaggccaccatcagcttccagtgtctggagcacggaaataccaa
aacctccctgcgggacaccgtccaggcagcccagtgtccacagacagtaacgttagtgca
gccccgggtcagaggaggcccctaaagaggcaaaaacaacatccagctgctcagacaggc
taccagcgtcgagaggcctatacagaggatctcccccctcctccgattcctcctccggct
atgctgaagtctccaacacacccggccaaaaccatcccggagggcccacggggggccatg
gcgcccagatccagttctgctgatggcaaggacaagcgaacaggttccggcggacccaga
ccccgggatggctcagacaaccggaccagctcctcagaacggcgagagggccaggatcta
cagaagggtcagaggacggggaaaagcagcaaacaagatgccagtgcaggccataagagc
cgccagcacccaggatcagaggacatcctaccttacagtcgcccatctttcccagcagtc
cacagtcctcgtggagaaagagaccccagctcctccagttcactgtcctctcgagggtcc
ggtggacggcggagaggtgaaggggctccgggggcccgcagaaaccctgcagatgttggt
ctaagcaccataggagcctttcagacaggaggggaggagcttgagatggtggagagctga
DBGET
integrated database retrieval system
