| Entry |
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| Symbol |
limch1b
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| Name |
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
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| KO |
| K24422 | LIM and calponin homology domains-containing protein 1 |
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| Organism |
ccar Cyprinus carpio (common carp)
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| Brite |
KEGG Orthology (KO) [BR:ccar00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:ccar04990]
109102017 (limch1b)
Domain-containing proteins not elsewhere classified [BR:ccar04990]
LIM domain-containing proteins
Other lim domain-containing proteins
109102017 (limch1b)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
B14:complement(3348600..3584387)
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| AA seq |
1031 aa
MASSGSDAGRHLLQQAHHHHHHHHHHPEPAVREALRWIEVVTGRSFNDSDFRGGLVNGIL
LCELLNTIRPGLVKKINRLPTPVAALDNVALFLKGCLELGLKSSQLFDPGDLQDTSARSN
KGPDNNKKLKNVLINIYWLGRAANSSTTYNGPTLDLHKFEGLLSQMRKEAEECDSPKRSI
RDSGYIDRWESERSDSLSSPRHARDDSFDSLDSIGSRSHQIASPDGLLAHCYSDGHGSDS
ECDTPQRKMPDVRKDDMLVRRTSCSEPRNAIPFNQYLPNKSNQSSYIPAPVRCPCTDRDD
SRKSWSNATSPVGGERPFRFSRSSSVFDDPESVSMIDMRSEEETMLLPHSQVRHELMHNQ
YNKLKEEEDHWQDDLAKWKSRRRSVSQDLIKKEEERKMMERLLSGDGGSQRKKSIKTYRE
IVEEKERREQELHEAYWNARTPEEAASVLQRYAQRFTISEAVIERLKLPKLLERSVSADP
TRHSSLPVSPDILFSLSASSNPLQYLRQQSLPLVKFTSTVEARVTGYSTEHEFVGDVTVP
SLRPKPYSSAAAEMRTAKVDEIMRLNGERENVGHSNKGGPQKNKEAEDDSLKFFPSSYQH
TDSDITDMSDVSGVQPTDHTLSSMCTQECCEKDTDTTEVEGGTVPQVGDVTISPEVLELK
AEKIDQEQTDETYISDSQQDMIQFDNSAVQVYKLATETPQKSTNQSEPSNLESYRTKPDL
AEKNGNVPPPVLNLVKRGEHFSWDPEEERKRQERWRQEQERKLQEKYQREKEKLKQEWEQ
AQKEVEEEERRYHEEERKILEETLTPQSTIAPSVLPKTHSTLQSQPEPENKQGPEKLMSS
GTYRQREKSNSESAQRNTESVQLTVRSPPQGCGSMGQRRQGDQSQEKQPTLPSSQEMPLC
NRLIPQRNETWKKNISQPKSGGRRRSDSIENIGPNSSTSPSFTDTQPPPSPNRSVSGKKL
CSSCGHPLGKGAAMIIETLSLYFHIQCFKCGICKGQLGDTSTGTDVRIRNGLLNCHQCYI
RSRSAGQPTTL |
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| NT seq |
3096 nt +upstreamnt +downstreamnt
atggcaagttcaggttcggatgcagggcggcatcttcttcagcaggctcatcatcatcat
catcatcatcatcatcatcccgaacctgctgttcgcgaggcgctgagatggatagaggta
gtgaccggcaggagttttaatgacagtgactttagaggtggactcgtcaacggcatctta
ctctgcgaactcctgaacacaatcagaccgggtcttgtgaaaaagataaatagactgccc
actcctgtagctgctttggataatgtggcgctcttcctgaagggttgtttggagttaggt
ttgaagagctctcagctatttgatcctggagatctacaagacacctctgcacgctctaac
aaaggtccagacaacaacaagaagttaaaaaatgttttgatcaacatctactggctgggc
cgagcagccaatagcagcaccacatacaacgggcccaccctggacctgcacaagtttgag
ggattgctgtcacagatgagaaaagaagcagaggagtgtgacagcccaaagcgaagcatc
agggacagtggttacatagaccgctgggagtccgagcgcagtgactctctttcctcgccg
aggcacgcgcgagacgactcattcgacagcctggattccatcggctcgcgttcccatcaa
attgcctcgcctgatggcctgcttgcccactgctatagcgatggccatggcagcgactca
gagtgtgacaccccccagaggaagatgccggacgtgcgcaaggatgacatgctggtccgg
cgaacttcctgcagtgaaccccggaatgccattcctttcaaccagtatctgcccaacaag
agtaaccagagctcatacatacctgcaccagtgcgatgcccttgcacagacagagatgac
agccgcaaaagctggagtaatgcaacctcacctgttggaggagagagacctttcagattt
agccgctcatctagtgtgtttgatgatccagagagtgtaagcatgattgacatgagaagt
gaggaagagactatgttgctgccccatagtcaagttcgacatgagctcatgcacaaccag
tacaacaagctgaaagaggaagaagaccattggcaggatgacttggccaaatggaagagt
cgcagaaggagtgtgtctcaggatctgatcaagaaagaagaggagagaaagatgatggag
agactgttgagtggagatggaggatcacagagaaagaaaagtatcaagacgtacagagaa
atagtggaggagaaggagcgtcgtgaacaggagctgcatgaagcatactggaatgcccgc
acaccagaggaagcagcttctgtgctgcagcgttatgcccagcgttttaccatcagtgag
gcagttattgagcgcctcaaacttcccaagctactggagaggagcgtatcagctgacccc
actcgtcactcctccctcccagtctccccagacatcctcttttctttgagtgcttcctca
aacccactgcagtacctaaggcagcagtcacttcccttggtcaaatttacatccacggtc
gaagcacgggtgacaggatacagcacagagcatgaatttgtgggagatgtgacagtgccc
tcgctgcgtccgaaaccttacagcagtgctgctgctgaaatgagaacagctaaggtggat
gaaataatgcgactgaatggagaaagggagaatgtcggccatagcaataagggaggacca
cagaaaaacaaagaggcagaagatgattctttgaagttcttcccatcttcttaccagcac
acagactcagacatcacagatatgtcagatgtgtcgggggtccagcccacggaccacaca
ctctcatccatgtgcacacaagagtgctgcgagaaagacacagataccacagaggttgaa
ggtgggacagtcccacaggttggtgatgtcactatatccccagaagtgttggagctaaaa
gctgaaaagatagatcaagagcagacagatgagacatatataagtgactctcaacaggac
atgattcagtttgacaactctgctgtgcaggtatataaactagcaactgagaccccacag
aaatcaacaaatcaatcagaaccatccaacctagaatcatacagaaccaaaccagatttg
gctgaaaaaaatggaaatgtccctcccccagtgctgaatctggtgaagcggggtgaacac
ttttcttgggaccctgaggaagagcgcaagcgtcaggagaggtggcggcaagagcaggaa
cgcaagcttcaggagaaatatcagcgtgaaaaggagaagttaaagcaggaatgggagcag
gcgcagaaggaagtggaagaggaggaaaggcggtaccatgaggaggagaggaagattctg
gaagagaccctgacccctcagtcaacgattgcaccatcagtccttcccaaaacccacagc
actttacaatcccagcctgaaccagaaaacaaacaggggccagagaagctgatgagctct
gggacttatagacaaagggaaaaaagcaacagtgaatcagcccaaagaaatacagagagt
gtacagctgacagtaaggtcccctccgcaaggttgtggttcaatgggtcagagaagacaa
ggagaccaaagccaagaaaagcagcctacattaccgtctagtcaggaaatgccactgtgt
aacagactgataccccagcgaaatgagacctggaaaaagaatatatctcaaccaaaatct
ggtggacgcaggaggtctgactctatagagaacattgggccaaattcatcaacatcacct
tcattcacagatacacaaccacctccatcaccaaacaggtctgtcagcgggaagaaactg
tgttcaagttgtggtcatccacttggcaaaggtgccgccatgattatagagactctcagc
ctttacttccacatccagtgctttaagtgtggaatctgtaagggccagttgggtgacacc
agcacaggaacagatgtgaggatcagaaacggtctactcaactgccatcaatgctatatc
cgctcccgctctgctggtcaacccacaaccttgtga |
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