Cyprinus carpio (common carp): 109102204
Help
Entry
109102204 CDS
T05134
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109102204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109102204
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109102204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
109102204
NCBI-ProteinID:
XP_042579596
Ensembl:
ENSCCRG00000035949
UniProt:
A0A9Q9WAW5
LinkDB
All DBs
Position
B5:complement(3688896..3702907)
Genome browser
AA seq
880 aa
AA seq
DB search
MEFPAVNHSYTHPPPQPWAGQSPRTQTMPPPSCPFPSHHYPNLNPDQQSVTPMTHTTETT
AGHRPQSLSWDPSQQSYQGVLKPVPEMTNMTNQGMPQRSLSLPTSPVSNSKTESRYGLDP
QILPSVVQVIKEDRIQWEGKVFVSECRSSVPPLSSTQCTLEDRGNATPRFIRCTSYSFPV
EAQSAQKSHLPLGAIVCPLARPEKGECDVPVCEAGDCVKGCAHCGAFMSPAMSWQDCGQR
FYCPFCHKLNEVPWQSYQPTNQGRRVDCEKKPELSLGSYEILEKQTGKAAVLLLAIDVSA
SAMRAGQLDHICKQISSQLQALNGPGETDRSDLRVGLMTYDSRIHLYNLSPALSRPHMMV
ITDCEELELPVVEGLLVPLKDCRHILERVLQEISLFNPEPDRSGSQELSVSAGLKILQDA
ASPGKLLIFHSSPVSEGSNQKSASGFFGSSKVKSIFQGPDSSISLAKECVSQGCSVHIFV
FCHQEVGGAWPGHIPFLTGGGVICYNSLQSEMEQERFRADLSRCVNMQMAFKVQLRVFVS
KEMHISGCYGSFIAGPDSCCVAMAALDWRTALAFEFTHNKSLDETRGVAIQFVLSYSSSS
GENRTRIHTVILSASRHPLDTFRSSQAETLLTFYCKKLYSLALESPLQSLREDLQTEVTE
MLACFRKQSCTTSVSPGQLVLPQFLKAVPVYINSLRKSEVLLPGLRSSVHQRLQLRSLIV
SMDTLSTASQFYPLILPLSVSADNANMPSLGEAVRCTVSSLDPGGLYLIYCPLALLLWVG
SCVPPHTLLQLFNTNSFSYLTSGEIKLPVLENSLSIGTRALICSLQSSAAVTLQLKLVRE
GDSCEESLQRLLVEDKSPNGGASYADFLFHLHVNALRLVV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcctgcagtaaaccacagctatacacatccaccaccacagccatgggccgga
cagagtcccaggacccagaccatgcctccacccagctgtccatttccttcacatcactat
ccaaacctgaacccagatcagcagagtgtgacccccatgacccacacgacggaaaccaca
gcaggccatcggcctcagtcactgtcctgggacccctcacagcaaagctaccagggagtg
ttaaagcccgttcctgagatgacaaatatgacgaatcaaggaatgccacaaaggagcttg
tcattaccaacgagtccagtgtcaaattctaagacagagtctcggtacggcctggatcct
cagattctacccagtgtggtccaggtgattaaagaggacaggatccagtgggaggggaaa
gtgtttgtttcagaatgcagatcttcagttccccctctctcctcaacacaatgcaccctg
gaggacagaggtaatgcaacacctcgttttatccgctgcacgtcctacagcttccctgtg
gaggctcagtcagctcagaagagtcatctcccgctgggtgcaatcgtgtgtccgctggcc
aggccggaaaaaggagaatgtgatgtgccagtttgtgaggcgggagattgtgttaagggc
tgtgcacactgcggggccttcatgagccctgctatgagctggcaggactgcgggcaaaga
ttctactgccctttctgccacaaactcaatgaagtgccatggcagtcctatcagcccact
aatcagggacgccgtgtcgactgcgaaaaaaaacctgagctcagtcttggctcatatgag
atcctggaaaaacagacgggtaaagctgctgtgttgctgctggcgatagatgtgtctgcc
agtgcgatgagagcggggcagctagaccacatctgtaagcagattagttctcaactgcaa
gctttaaatgggcctggagaaactgaccgatcagatcttcgagtgggtttgatgacctat
gacagccggatccatctgtataacctgagtccagctctgtcccgccctcacatgatggtc
atcactgactgtgaggagctggaacttcctgtggtggagggccttctggtgccactgaaa
gactgcagacacattcttgagagagttctacaggaaatttcacttttcaaccctgagccg
gatagatctggctcacaagagctttctgtttctgcagggctgaagattcttcaggatgca
gcatctccaggaaaattattgatattccattcctcacctgtttctgaaggctcaaatcag
aaaagcgcctcaggtttcttcggctctagcaaagtgaagtccatcttccaaggaccagat
tcttcgatctcattggctaaagaatgtgtcagtcaaggctgcagcgtgcacatctttgtg
ttctgccatcaagaagtaggcggggcttggccagggcacatcccctttctcacagggggt
ggggtcatctgctataacagtctacagtcggagatggaacaggaacgcttccgagctgat
ctgagcagatgtgtgaatatgcagatggccttcaaagttcagctcagagtttttgtcagt
aaagagatgcacatatctggttgctatggctccttcatcgccggtcctgactcctgctgt
gttgccatggcagcgcttgattggcgcacagctctggcatttgagttcactcacaacaag
tctttggatgaaacgaggggtgtagccatacagtttgtgctgtcatacagtagctcctcc
ggagagaacaggacacggatacacactgttattctgtccgcttcccggcatccactagac
acctttagaagcagccaggccgagacgctcctcacattctactgcaagaaattgtattca
ttagcactggagagtccgctgcagtccctgcgtgaggacttacagacggaggttactgag
atgttggcttgcttcaggaaacaaagctgcactacctctgtgtccccaggacagctggtg
ctgcctcagtttctgaaagccgtgcctgtctacattaacagcctgcgcaaaagcgaagtg
ctgctgcctgggctgcggagctctgtacatcagcgtctacagctgcgtagcctcattgtc
tccatggacacgctgagcactgcttctcagttctacccacttattctgcctctgtctgtc
tctgctgataatgccaacatgccatcattaggggaagccgtgcgctgtactgtctccagt
ctggatccagggggtctgtatctgatctactgcccactggcactgctcctttgggtgggc
agctgtgtgcctcctcacactcttctacagcttttcaacaccaactccttctcctacctc
acatctggagagatcaaactcccagtgcttgagaactccctctccatcggcaccagagct
ctcatatgctctctgcagtcctcagcagctgttactctccagttaaaactggtgcgggag
ggtgacagctgtgaggagtctctgcagcgcctcttggtggaggacaagagtcctaacggt
ggagcttcatacgctgacttcctttttcaccttcatgtcaatgcattgcgtcttgtcgtg
tga
DBGET
integrated database retrieval system
