Cyprinus carpio (common carp): 109102423
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Entry
109102423 CDS
T05134
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109102423
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109102423
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
V-set
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
109102423
NCBI-ProteinID:
XP_042616579
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Position
A7:27920500..27933571
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPTDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISVIEPGAFSNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDLVFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKVLEIANWPLLETLTTKSLHGLNITTLSITNCNLTAIPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKIQDQKAIHKFVDEGTTVQFPCQADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHIHSYSPNWPHQPNKTFAFISNQPND
SGANGTGATTPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGESSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ttggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggctct
gccactggctgcccctctcgctgtgagtgcagtgcccaagagcgctcggtcgtgtgccat
cggcgaaagctgatcgccctccccgagggaattcccactgacacacggctgttagatctc
agcaaaaaccgcttgaaagccatcaacccagaggaatttctcaactatcaacacctggag
gagctacagcttaacgagaacataatttctgtcattgaaccaggggccttcagcaacctc
cttggcttgcgaatattgggactacgcaacaacaagctgaagttgatacagctgggtgtt
ttcactggcctcagtaacctcactcgattagatattagtgagaataaaatagtcattttg
ttggacctcgtgtttcaagatctctacaacctaaaagaactggaggttggggacaacgac
ctggtgttcatctctcacagagcttttcacggccttagcagcctagagcagctaactatg
gaaagatgcaacctgacctctgtgccaacagaggccttcagtcatcttcacaacctgctg
accctcagactgcggcatctcaacatcaatatcattcgagacttttccttcaggaggctc
tatcgactcaaagtcttagagatagcaaactggcctcttttagaaaccttgaccaccaag
tccctccatggacttaacatcacaaccctgagcatcacaaactgcaatctcactgccatc
ccttacgaggccattcagcacctggtgtatcttcgatttttcaacctgtccttcaatcca
attgaggttgtggagggtaacaaaatgcacaatttgctgaggctccaggcatttcacttg
gttggaggccggctagtcagcattgagccttattcgttcagaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttagaggagtctgccttccattcagtc
ggcaacctggagacactggctcttcatgacaaccccctggcatgcgactgtcgtctcctc
tgggtctttcgccgtcgatggagacttaacttcaaccgccagcagccatcttgtgaatca
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctccctccgaattat
ttcacctgtcagaaatccaagatccaggatcaaaaagccattcataaatttgtggatgag
gggaccactgtccaattcccttgccaagcagatggagaccctgctcccatgattatgtgg
cagtctccaaaaaagcaatttatcactactaaaagcattggccggctgtctgtgtctccg
gatggcaccctagaggttagatacgcccaaatacaagacaatggcacatacacctgcatt
gctgttaatgcaggtggtaacgacacccgtttggctcacctacacattcatagctactct
cccaattggccccatcagcccaataagacctttgccttcatatcaaaccagcccaatgat
agcggtgccaatggaactggtgcgacgactccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctgggagtagtactgttctgtctggtgctc
ttgttcctctggagccgaggaaaaggcaatgccaagccaaacatcgagattgagtatgtg
ccacggaaagtagatggagaaagcagcccgactgagggatctcacaagatcagtatgaaa
atgatttaa
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