KEGG   Cyprinus carpio (common carp): 109102425
Entry
109102425         CDS       T05134                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109102425 (smu1a)
Spliceosome [BR:ccar03041]
 Complex B
  Other components
   Complex B specific factors
    109102425 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_TEP1_C Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_BBS7 Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd DUF7165 TFIIIC_delta Beta-prop_NOL10_N VPS8_N PROPPIN zf_topless PA14 LisH Beta-prop_IFT122_2nd TolB_like LisH_PAC1
Other DBs
NCBI-GeneID: 109102425
NCBI-ProteinID: XP_042625857
Ensembl: ENSCCRG00000021652
UniProt: A0A8C1LAW4
LinkDB
Position
A14:13595759..13600736
AA seq 513 aa
MSIEIESADVIRLIMQYLKENSLQRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEDERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCISFSKDSSQILSASFDQTIRIHGLKSGKSLKEFRGHSSFVNDATLTPD
GHHIISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagagtcagcagacgttattcgtctgatcatgcagtatctgaaggaa
aacagcttgcaacgtactctagcaacgctccaggaggagacgacagtgtccctcaacacg
gtggacagtattgagagtttcgtggcagatatcaacagcggtcactgggacactgtgctt
caggctatacagtccctcaaactccctgacaagaccctcattgacctttacgaacaggtt
gttcttgagctgattgagctccgagagctgggagcagccagatctctgttgaggcagact
gaccccatgatcatgctgaaacaaacccaacctgagcgttacatccacctggagaacctt
ctagcacgctcttactttgaccccagagaggcctatcctgatggcagcagtaaagagaag
cgtagagcagctatagctcaggctcttgctggtgaggtcagtgtggtaccaccgtcacgt
ctgatggctctgcttggacagtctctgaagtggcagcagcatcagggtcttctgcctccc
ggtatgaccattgatttgttcagaggtaaagcagctgtaaaggatgtagaggatgagcga
ttccccactcagctggccagacacatcaagtttggacagaagtctcacgttgagtgttca
cgcttctctcctgatggccagtatctggttactggatctgtggatggatttattgaagtt
tggaactttactaccggaaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgacgcagtgctttgcatgtctttcagtcgggacacagagatgttggcc
acaggagcccaggatggcaagattaaggtgtggaagatccagagcggtcagtgtctgcgg
cgatatgagcgtgctcacagtaaaggtgtcacctgtatcagtttcagtaaagacagcagt
cagattctctctgcatccttcgatcagaccatcaggattcacggattaaaatcaggcaag
tctttaaaggagttcagaggtcattcttcatttgtgaatgatgccacacttactcccgac
ggtcatcacatcattagtgcctcatctgatggaactgtgaaggtctggaacatgaagacc
accgaatgcaccagcacattcaaatctctgggcacatctgcgggaacagacatcactgtt
aacaatgtgatcctgcttcctaaaaaccctgagcattttgtcgtgtgtaaccgatccaac
actgttgtcatcatgaacatgcagggccagattgtgaggagtttcagctctggtaagaga
gagggaggtgattttgtgtgctgcactctgtctccacgtggcgagtggatctactgtgtc
ggcgaggactttgtgctttactgtttcagcacagtcacaggcaaactagagagaaccctg
accgttcatgagaaggatgtcattggtatagctcatcaccctcaccagaatttgatctcc
acatacagtgaggatgggctcctaaaactctggaagccgtaa

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