Cyprinus carpio (common carp): 109102467
Help
Entry
109102467 CDS
T05134
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1-like isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccar03037
]
109102467
Cilium and associated proteins [BR:
ccar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109102467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF2089
Motif
Other DBs
NCBI-GeneID:
109102467
NCBI-ProteinID:
XP_042590526
Ensembl:
ENSCCRG00000042030
UniProt:
A0A9R0AB95
LinkDB
All DBs
Position
B11:complement(21934238..21948020)
Genome browser
AA seq
629 aa
AA seq
DB search
MEQRSDSLVSADSELAQCETEVNTLLKIISDLNRKMDSLQIPRESPVGVSGCSMVGAASV
MSKTKNVCRDSEGGSSELWNELQKVLSALETSSGQGRKMLFRLQTQNAETIQAKHLSTAR
ESWVRATQVLEEMERELGISYPSALPPDERRQYQREVLSLYKHNQDLNNFLKSRQEELMG
AERTLMDLEDEKKWLQEKMVDLKRKWLYGVSRSPSVSPSLSSSRTSSPCFSSPPYPGSPL
LSRKLPSSRPDSPSSPCTVDSVLQTEIEKLQRCLERLKARNERLNAALLRRKGESEQLSM
SLSRQEADSSALHMALTYCEECEEAYGDLLSLSEARKQQNAETFSTPQPENLDKGESSSS
PPEGTAETKPNSLSEKEFEDKSGVLLQRISRLKQDRAAVCIPQRGKAGEGKISPDTGTLA
GVRGRASSLSKNTKEEKAALMYELVTVREDMSEMRGNLRLLEKERRCLDLALMVQSAQDS
AGALILDSLRDELGERRATQQRIAENLAKLEGGGGIPGPRNHSILRELQAALQREQSLKM
RVAALRESLDSALTDSTTQRRINREETARLSRYYIKVSSTYRSSRKKHQEQLWQLEKQIA
VMSERHAKEEAELSNTLEAMEWKREETIL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagatcggacagtctggtgtcggcggactctgaactggcgcagtgtgagacg
gaggttaacactttactgaagatcatttctgacctcaacaggaagatggactccctacaa
ataccacgagaaagtccagtcggggtcagtgggtgctcgatggtgggcgctgcatcagtg
atgtccaagaccaagaacgtctgcagggactcagaagggggcagcagtgagctgtggaac
gagctgcagaaggttctctctgctcttgagacgtctagtggtcaggggaggaaaatgctc
ttcaggctgcaaactcaaaatgctgagacaatccaggcaaagcatctctctacagcccgg
gagagctgggttcgggccacacaggtgctggaggagatggagagggagttggggatctcg
tacccctctgctctgccccctgatgagagacgtcagtatcagcgggaagttctctcactc
tacaaacacaatcaagacctcaacaacttcttgaagagccgtcaggaagagcttatgggt
gctgaaagaactctgatggatcttgaggacgagaaaaagtggctacaggaaaagatggtg
gacctgaagaggaaatggctgtatggagtgagtcgttctccttctgtcagtccttcattg
tcctccagtcgaacttcaagcccttgcttttcctctcctccatatcctggatccccgctg
ctgtcccgcaaactacccagctccaggccggactccccttcgtctccctgcaccgttgat
tcagtgctgcagactgagatcgaaaagctgcagaggtgtctggagcgtctgaaagctagg
aatgagcgtctaaatgccgcactgctcagaaggaaaggagaatcggagcagctgagcatg
agtcttagccgacaggaggcagacagctcggctctacacatggctctgacatactgtgag
gagtgtgaggaggcttacggtgacctgctgtccctgtctgaagccagaaaacaacagaac
gcagaaacatttagcacaccccagcctgagaacttggacaaaggcgagtcatcctccagt
ccaccagagggcactgctgagaccaaaccaaacagcttgtcggaaaaggagtttgaggac
aagtctggtgtacttctgcaaaggatctccaggctaaagcaggacagggccgctgtgtgt
atcccgcagcggggcaaagcaggagagggcaagatcagtccagacactggcacgctcgca
ggggtcagaggtcgtgccagttcactttccaaaaacaccaaagaagagaaagcggctctg
atgtatgagcttgttacagtcagggaggacatgtcagagatgcgtgggaatctgcggctc
ctggagaaagagaggcggtgtttggacctggcgctgatggtccagagtgcccaggattct
gctggtgctctgatcctggacagtctgcgggatgagctgggggagaggagagccactcaa
cagagaattgctgaaaatttggcaaaactagaaggtggtgggggaattcctggtcctcgg
aatcactctatcctaagagaactacaagcagcactgcaaagggaacagtcactgaagatg
agagtggcagctttacgtgagtctctggactcggcgctcacagacagcactacacagaga
aggatcaacagagaggagactgcgcgtctctcccgctactacattaaagtttcaagcacc
tacagaagttcccgaaagaagcaccaggagcagctgtggcaactggagaagcaaatcgca
gtcatgagtgaacgtcatgctaaagaagaggccgagctaagtaatacactagaagctatg
gagtggaagagagaggagacaatactctag
DBGET
integrated database retrieval system
