Cyprinus carpio (common carp): 109102524
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Entry
109102524 CDS
T05134
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109102524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109102524
03021 Transcription machinery [BR:
ccar03021
]
109102524
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109102524
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109102524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
HTH_PafC
Motif
Other DBs
NCBI-GeneID:
109102524
NCBI-ProteinID:
XP_042571917
UniProt:
A0A9Q9VVF1
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All DBs
Position
B1:23702070..23727720
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AA seq
627 aa
AA seq
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MANRGSTTQDESSTADLSKGSMENGAHGAQANGLAGHKPSGQAAVSGVQTQELLQQLSMT
PAQLLQTQTQLLAAGQQSSTTGASISASAATPITLSQPIQIASPQGLNLQQFVLVQPGHS
LSPQFQPQFIISPSPQGQTGLLQAQSVLTHLPHSPAQSSLALTAQAATPTRKIAAMPAPA
AAPKRIDALCVEEASDLEELELFAKSFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISR
FEALNLSFKNMCKLKPLLEKWLNDAEHMSADCVVSSASEMSPGLCESLNRRRKKRTSIET
SIRLALEKSFLEQSQKPSSEEITLISDQLHMEKEVVRVWFCNRRQKEKRINPPSSGGSSG
SALRTIYSSASAAVSSGTSTLTVSPVVSLSSSNISNLTFSGGALGQVTSNAPTVISMATP
TPIMTSSSLSSSTTAVKQGGAVSSATTVTQGAGQLLVTGTGLGGANLTAFAGLNPTIITP
SQLIQGGALLSLSPALMNNNLLATIQALASGGAFPLTSIDGNTSLLFANTSTGNPAPSLV
TTPLFLNPSSFSLLPANLLSAGGAGGGALNLLMSGVVAAATECCGGLGGGVSGVGVATPF
SVLSPKTLVNNRLRRTFDAQGDGEDET
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaggatcaacgactcaagatgagagctcgactgcagatctgagcaaaggc
agcatggagaacggcgcacatggagctcaggccaacggtctggctggccacaaaccgagc
ggccaagcagcggtcagcggcgttcagacgcaggagctgctccagcagttgagcatgact
ccagcgcagctgttgcagacgcagacgcagctcctggccgcaggtcaacagagcagcacc
accggagccagtatctccgcctccgcggccacgcccatcacactgtcccagcccattcag
atcgcgtctccgcagggcttgaacctgcagcagtttgtcttggtccagccgggtcactcc
ctcagtcctcagtttcagccgcagttcatcatatctccgtctcctcagggtcagaccggt
ctcctgcaagctcagagtgtcctgacgcatctacctcacagcccagcgcagagcagcctc
gccctcaccgcgcaggctgctacaccgacgcggaagatcgcagcgatgccggctccagcg
gccgctccgaagcgcatcgacgctctgtgtgtggaggaggccagcgacctcgaggagctc
gagctgttcgccaagagcttcaaacagagacgcatcaagctgggcttcactcagggagat
gtggggctggcgatggggaaactctacggaaacgacttcagtcagaccaccatctccaga
ttcgaggccttgaacctgagcttcaagaacatgtgcaaactcaaacctctgctggagaaa
tggctgaacgacgcagagcacatgtctgcggactgcgtggtgtcgagtgcgagcgagatg
tctccgggtctctgcgagagtctaaaccgccgccgcaagaagcgcaccagcatcgagacc
agcatccgtctggcgttagagaagagcttcctggagcagagtcagaagccctcgtcggag
gagatcacgctgatctcggatcagctgcacatggagaaggaggtggtgcgcgtctggttc
tgtaaccgcagacagaaggagaagcggatcaatcctcccagcagcggcggctcgtccgga
tcagccctccgaaccatctacagcagcgcctcggccgcggtgtccagcggcacgagcaca
ctgacggtcagtcctgtggtttctctgagcagcagcaacatctctaacctgacgttcagc
ggcggagctctgggtcaggtgacgtcgaacgcacccaccgtcatctccatggccactcct
actccgatcatgacatcatcctccctcagctcatccaccactgctgtcaaacagggaggg
gcggtttcctcggcgacaacggtcacgcagggggcggggcagctgctggtgacgggcaca
ggactgggcggagctaatctgacggccttcgcgggtttgaacccgacgatcataacaccg
tcgcagctgatccaaggcggggcgctgctgagtttgagtcctgcgctgatgaacaacaac
ctgctggccaccatccaggctctggcgtctggcggcgcttttcctctgacctccatcgac
ggaaacaccagcctgctattcgccaacaccagcacgggaaaccccgcccccagcctggtg
accacgcccctcttcctcaacccgtccagcttctctctgctgccggccaatctgctgtcg
gcgggcggggccggaggcggagctctcaacctgctgatgagtggtgtcgtcgcggcggcg
acagagtgttgtggtggtctcgggggtggagtgagcggtgtgggtgtggctacgccgttt
tctgtgctatcaccaaaaacacttgtgaacaatcgtctgcgtcgcacatttgatgctcaa
ggagacggggaggatgaaacttaa
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