Cyprinus carpio (common carp): 109102571
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Entry
109102571 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03083
Polycomb repressive complex
ccar04980
Cobalamin transport and metabolism
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109102571
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
109102571
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109102571
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccar01009
]
109102571
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109102571
03029 Mitochondrial biogenesis [BR:
ccar03029
]
109102571
Protein phosphatases and associated proteins [BR:
ccar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109102571
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109102571
HMT complexes
COMPASS/SET1 complex
109102571
MLL-HCF complex
109102571
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109102571
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109102571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Motif
Other DBs
NCBI-GeneID:
109102571
NCBI-ProteinID:
XP_042585259
Ensembl:
ENSCCRG00000002147
UniProt:
A0A9Q9WKU8
LinkDB
All DBs
Position
B8:complement(4934802..4955650)
Genome browser
AA seq
1997 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGAPAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMS
WENILMDTLEDNIPRARAGHCTVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQ
PPSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPTPSLPINSPK
SPAPAAAAPAAQSLPLSGVTMVPQVPSPTAAMPCSPLAASPRGPAILKVAAPHSTPGTSV
VTVRQATPGGKSPVTVTSLPAGVRMVVPAQSAQGTPIGSSPQMSGMAALAAAAAATQKIP
PSSTTTVLNVPAGATIMKTVAVTPGSTALPATVKVASPVMVTNPATRMLKTAAAQVGTSA
ISTPNTPNRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGGSGSLISSLG
KMMSVVQTKPVQTSAITGQAGGSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQAG
GPGNKPTILGYSTVSPTTANKPGTTIIKTIPMSAIQQGATGLTSSPGVKSPITIITTKVV
TPGTGTPGKIITAVPKLTGAGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTVSAG
KPTVTTLVVKGTTGVTTLGTVSGTVSTSVAGANVASANASLVTPVTTLGSIATLSSQVIS
PTAITVSAAQNKLATATIQSAAQPTQVTLITTPSGAEAQPAQDLPVSILASPTSEQTSTT
GADAGDGAGDGATTVTLVCSNPPCETHETGTTNTATTASAKMGNEQICSNPPCEMHVTGT
TNTATTASANMGGAQQVCSNTPSETHDTGTTNTATTASSDMGSKEMGTVNSKTTSSSPAT
SSASGSEPATPVSESSAGPGTMRPENPRTGTTNTSTTARSNMGSDQTGTVQSSNKSQAGI
SSTVMPVCSNSPSETNEEGTANTSPVSGDVQQVCSTPHCETHETGTTNTATQSSSSMGSG
QTDVVQRVCSNPPCETHETGTTNTSTQASSSIGAGQDDAVQKVCSNPPCETHETGTTNTP
TQASSSIGAGQNSTVQRVCSNPPCETHETGTTNTPTQASSSVGAGQNSTVQRVCSNPPCE
THETGTTNTSTQPTQSIGAGQDDAVQRVCSNPRETHETGTTNTPTQASSSIGAGQDDAVQ
RVCSNPPCETHETGTTNTATTATSSLETGDVTAQQAGDGQSDSGTSSEPSSSTEPANATT
QSRAITTVTQATPTPGPSVPEISSMAGSAVVAEVPGEAEAMEQTSAEAVAAGEEPMQTEC
QGELGEEGAVRVVAIDESAAGEEGTMLQVHVAMEAQPGQGDQAEQMEAGVEGAEAMSLAA
QNSEALALPQELMSAEGQQTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQ
AAQQAVLSEGDAGHDGQQSTTIPIVLTPQELAALVQQQHQLQEAQAAAAQQLSAAAAAAA
LPTEGLAPADSLNDPASESNGHEMTTAVAGAVARLLPRTSAETLAPSSTFAPSQPMMVAS
PAKMQAATALAEVANGIESAAGKQEAPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYVP
ADDSAVTDDDSGAIPDXELYEGDGYLFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAI
KISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKASAPAQLAFMRVYCGPNPS
CLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPV
SSPDMKGAGPKKARSDQ
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcggggacctcggttctgcagccgcgctggaagagggttttgggctggtct
ggcccggtccctcgcccgagacacggacaccgagctgtggccattaaggagctgatggtg
gtgttcggcggagggaatgaaggcattgtggacgagctgcacgtctataacacagccacc
aatcagtggtttattcctgctgtccggggtgacattcctcccggctgtgctgcatatgga
tttgtgtgcgacggcaccagactccttgtgttcgggggcatggttgagtatggaaagtat
agcaacgatctttatgaactacaggccagtagatgggagtggaaacgtttgaagcccaaa
gcccccaagaatggcccaccaccatgtcctcgactgggccacagcttttccctggttgga
aacaaatgttatttgtttggtggactggcaaatgacagtgaagatcccaaaaacaatatt
cccagatacctgaatgacctctacacactcgagcttcgcccggggtctaacgtagcaggc
tgggacatccccattacatacggtgtgcttccccctcctcgggagagccacactgctgtt
gtctacacggagaaaacgtccaaaaagtctcgtctcatcatctatggcggcatgagtggt
tgccgtcttggggacctctggactttggacatagatactttaacctggaacaaacctgcc
ataagcggtgcgccggcacctttgccccgcagtctccactctgccaccactataaccaac
aagatgtttgtgtttggtggatgggttcctctggtcatggatgatgtcaaagtagcgaca
cacgagaaggaatggaagtgcactaacacactggcttgcttgaatctagactcaatgtct
tgggaaaacatcttgatggacacgctcgaggataatatccctagggccagagccggacac
tgcactgtggctataaacaataggctgtacgtctggagtggaagagacggctaccgcaaa
gcctggaacaaccaagtttgctgcaaagatctgtggtatttggaaacagatcgtcctcag
cctccgtcacgtgtgcagctggtccgtgccaacaccaactctctggaggtgagctggggg
gcggtgcctactgctgacacttacctgctgcagctgcagaaatatgacatccctgctgca
acagctgccacatcgccaacggtcaacccaaccccgtctttacccatcaactcgcctaag
agtccggcgcccgccgctgctgctcctgcagctcagagtctgcccctctctggggtcaca
atggtgccacaagttccttcccccaccgccgccatgccatgcagcccgcttgcagcctca
ccacgtggaccagctattcttaaagtggcagcgcctcattccacccccgggacgtcagtc
gttactgtgcgtcaggccactccaggaggaaaatccccagttacggttacatcacttcct
gcaggtgtccgcatggttgtccctgcacagagcgcccaggggacgccaatcggcagcagt
cctcagatgagtggcatggctgctttggctgcagctgcagctgccacacagaagatcccg
ccctcttccacaaccactgtgctaaatgttccagccggagccaccatcatgaaaaccgtc
gctgtgactcctggatccacagctctgccagctactgtcaaagtagcttcacctgtaatg
gttactaatcccgcgacccgaatgctgaaaacggctgcagctcaggtcggcacttccgcc
atctctactcctaacactccgaatcggccgatcatcactgtgcacaaatcaggcacagta
accgtagcccagcaggctcaggtcgtcaccaccatggtcggaggagtcaccaaaactata
acccttgttaagagccccattacaatgggtggtagcggttctctgatctccagccttggg
aagatgatgtctgttgtccagaccaaaccagtacaaacctctgcgatcaccgggcaggct
ggaggcagtcctgttactctaatacaaacaaaaactcctctgcctgctggtaccatcctg
aaactggtcacatctgctgatggcaagcccaccacaatcattacaacttcacaggcagga
gggcctggcaacaaacccactatcctgggatacagcacagtctctccaactaccgccaac
aaaccaggaaccaccattattaaaaccattcccatgtctgctatccaacaaggagcaaca
ggtctgactagcagccctggcgtcaagtcccccatcacaattatcaccactaaggttgtt
actcctggcacaggtactccagggaaaatcataacagctgtgccaaaactgacaggtgca
ggacaacagggggtcacacaggtggtcctgaagggggcgccagggcagcctggcactatc
ctgcgcactgtgcctatgggtggagtgcgtctggtttcaccaggcactgtgtccgctggc
aaaccaactgttaccacattggttgtcaagggcaccacgggagtcacaactctgggtaca
gtaagtggtactgtatcaactagtgtggcaggggccaatgtggcaagcgctaacgccagc
ctggtgactccagtcaccacacttggctccatcgccacattgtccagccaggtgatcagt
cccacggccatcactgtatctgctgcccagaacaagctcgccaccgctacaatacaatcg
gcagcccagcctactcaagtaaccctgatcacgactccaagcggtgctgaggcccagcct
gcacaggatcttcctgtctccatcctggcctctcccacctcagagcagacctccaccact
ggtgctgatgctggtgacggcgctggcgatggtgctaccaccgtgacactggtctgctcc
aaccctccgtgtgagacacatgagactggaacgaccaacacggcgacaacagcttcggcc
aaaatgggcaatgaacagatttgttccaacccaccctgtgagatgcacgtgacaggcacc
accaacacagcaactacagcctctgcgaacatgggcggagcacagcaggtgtgctccaac
acaccctcagaaacccatgacacgggcaccaccaacacagccaccactgccagcagcgac
atgggatctaaagagatgggaactgtgaacagcaagacgacgtcatcttcgccagctacg
tcttcagcttctggttcagaaccagcaacacccgtctcagagagcagtgctggaccgggc
accatgcggccggagaatccgcgcacggggaccaccaacacctccactaccgctcgttcc
aacatgggctccgaccagacgggcacggtgcagagctccaacaagagccaggccggcatt
tcttctacagtgatgcctgtttgctccaactctcccagcgaaacgaacgaggagggcacc
gcaaacacttcacctgtgtctggtgacgtccagcaggtctgctcaactcctcactgtgag
acacacgagacgggcacgaccaatacggctacgcagtcgagctctagtatgggcagtggg
caaaccgatgttgtgcagagggtgtgttccaatccgccctgtgaaactcatgaaacgggc
accaccaacacatcaacccaagcctcatcttctattggtgctggacaggatgacgctgtg
cagaaggtgtgttccaatccgccctgtgaaactcatgaaacgggcacaaccaacacacca
acccaggcctcatcttctattggtgctggacagaatagcacagtgcagagggtatgctcc
aatccgccctgtgaaactcatgaaacgggcacaaccaacacgccgactcaggcctcatct
tctgttggtgctggacagaatagcacagtgcagagggtatgctccaatccgccctgtgaa
actcatgaaacgggcacaaccaacacatcaacccaaccgactcagtctattggtgctgga
caggatgacgctgtgcagagggtatgctccaatccgcgtgaaactcatgaaacgggcaca
accaacacgccgactcaggcctcatcttctattggtgctggacaggatgacgctgtgcag
agggtatgctccaatcctccctgtgaaacccacgagaccggcaccaccaacacagccacg
acagcaacaagcagcttagaaactggagacgtaacagcccagcaggctggtgatggacag
agtgacagtggcaccagctcagaaccctcgtcatctacagaaccagccaatgcaacaaca
caaagcagagccatcacaaccgtaacacaggccacgcccactccaggaccatcagtaccg
gagatttcatccatggctggatctgcggtagtggctgaggtcccaggagaggccgaggcc
atggagcagaccagcgctgaggctgtggcagcgggagaagagcccatgcagaccgagtgt
cagggagagctgggtgaagagggagccgttagggttgttgccatagatgaaagtgcagcc
ggtgaggagggcaccatgctacaggttcatgtcgccatggaagcacagccaggtcaagga
gatcaggctgagcagatggaggccggtgtggagggtgcagaagcgatgagtctcgccgct
cagaactcagaagccctcgcactgccccaggagctgatgtctgcagaaggacagcaaacc
accctcatggtgaccggactgactccagaggagctggctgtgactgcagcggctgaggct
gcagcacaggctgcggctacagaagaagcgcaggcccttgccatccaggctgtcctacag
gcggctcagcaggctgtgctcagtgagggagacgcaggtcacgatgggcagcagtccacc
accatccctatagttttgactccgcaggagctcgctgctctggttcagcaacagcatcag
ctccaggaggcgcaggcagccgcagcccagcagttaagcgctgcagcagccgcagctgca
ctgcccaccgaaggcttggcaccagcagacagtctcaatgacccggcgtctgagagcaac
ggccacgagatgacaactgctgttgcgggagctgtggcccgtctccttccacgtacttct
gcagagactctagccccatctagtacttttgcaccatctcagccgatgatggtcgccagt
ccagccaagatgcaagcggccactgctttagctgaggtggccaatgggattgaatcagca
gctgggaagcaagaagctcctccggcagttgtaaagccaccagtgaagaaagagaatcag
tggtttgacgttggaatcgtgaaggtcacaaacatggttgtcacgcactattatgtgcca
gcagatgattcagcggttactgatgatgattctggcgcaatccctgacntagagctttat
gaaggagatgggtatttgtttcgtgtggccggtatcaacgcgtgcggccgcgggacgttc
tctgaggtctctgcgtttaagacctgcttacctggcttccctggagccccgtgtgccatc
aaaatcagcaagagccccgatggtgcccacctgacctgggagcctccttcagtgacgtcg
gggaagatcattgagtattcggtgtatctggccatccagagctcacaaactgtcgaggct
aaagcgtccgctccggctcagcttgcctttatgcgggtgtactgtgggcccaacccatcc
tgcctagtgcagtcgtctagtctctccaacgcccacatcgactacaccaccaaacccgcc
atcatcttccgcatcgccgcacgcaacgagaagggctacggccctgcaacgcaagtcagg
tggctacaagaaaccagtaaagatggctctgcggccaaacctgcagcaaagagaccggtc
tcgtcacctgatatgaaaggcgctggtccaaagaaggccagatctgaccagtga
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