KEGG   Cyprinus carpio (common carp): 109102623
Entry
109102623         CDS       T05134                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109102623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109102623
Spliceosome [BR:ccar03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109102623
 Complex B
    109102623
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 109102623
NCBI-ProteinID: XP_042631375
Ensembl: ENSCCRG00000051726
UniProt: A0A9R0BE62
LinkDB
Position
A2:complement(15840903..15859995)
AA seq 563 aa
MAVAVSAVNGGEALMMENGQSMASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTL
AHQQQQLSSLQLPNSLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGE
DTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV
GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPT
TGKHKGYGFIEYDKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAA
AVAAAAATAKITAQKDNIACKLQKQMAWNLSQPENRTEDFLNCLEAVAGASILGAMTAGT
GLNLPQLPQAVMAAQAPGVITGVTPARPTLPVVPQVGLVNPVLASPPSLSAAVAAAQEAK
KEKEEEESAQDGTGQEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVGPEDID
DDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAASEMNKAIQALNNRW
FGGRKVIAEVYDQERFENSDLSA
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggcggtggctgtttcagcggtaaatggaggtgaggctctgatgatggagaatggacag
agcatggcctcaaagctcggcctgccgcccctcaccccagaacagcaggaggcgctgcag
aaggcaaagaagtatgccatggaacaaagcatcaagagcgtcctggtcaagcagaccctc
gcccatcagcagcaacagctcagcagcctgcagctccccaattcccttcagatggcctca
ttaacgatgggctttggagatcccctctcaccactacagtctgttgcagcacagaggcaa
cgggcactagccataatgtgccgtgtttatgttgggtccatctactacgagttaggagaa
gacaccatcagacaggcctttgctcctttcggtcccattaagagcattgacatgtcctgg
gactctgttacattaaaacacaagggttttgcatttgtagaatatgaagtaccagaagca
gcacagctcgctttagaacagatgaactccgttatgttgggtggtagaaacattaaagtg
ggacgaccaagcaacattggtcaggctcaacccatcatagaccagctagctgaagaagcg
cgcgccttcaaccgaatttacgttgcatccgtgcatcccgacttgtcagacgacgacatc
aagagtgtgtttgaggcctttggaagaatcaagtcatgcagcctggcgcgggaccccacg
acgggaaaacacaaaggctatggcttcatagaatatgataaggcccagtcttcgcaggat
gccgtgtcctccatgaaccttttcgacttaggtggccagtacctgcgagtgggcaaagca
gtcacaccccccatgcctcttctgacgccaacgacgccaggcggccttcctcccgcagct
gccgtagctgctgctgccgccactgccaagatcacagcacagaaagataacatagcgtgt
aaactccaaaaacagatggcatggaatctgtcccagccggagaatcggacagaagacttc
ctcaactgtctggaagcggtagcgggggcatctattctgggagcgatgaccgcggggaca
ggcctgaacctgcctcagctcccacaggccgtcatggcagctcaggccccaggggtcatt
acaggggtgacaccagcgcggcccacactccctgttgtgcctcaggtgggccttgtgaac
ccagtgttggcttctccaccgtcactgtcagctgctgtggctgcagcccaagaggcaaag
aaggaaaaagaagaggaagaatccgctcaagacggcacgggccaggagatgctcagtgaa
caggagcacatgagcatctctggcagcagtgccagacatatggtcatgcagaaactgttg
agaaaacaagagtctacggttatggtgctcaggaacatggttggacctgaggacatagat
gacgatctggaaggagaagtaacggaggaatgtgggaagtttggagctgttaatagagtg
atcatctatcaggagaagcagggcgaggaggaggatgctgaagtcattgtcaagatcttt
gttgagttttcagcggcatcagagatgaacaaggccattcaggcactcaacaaccgctgg
ttcggaggtcgcaaggtcattgctgaggtgtatgatcaggaacggtttgagaacagtgac
ctctctgcatag

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