KEGG   Cyprinus carpio (common carp): 109102726
Entry
109102726         CDS       T05134                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03420  Nucleotide excision repair
ccar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109102726
  09124 Replication and repair
   03420 Nucleotide excision repair
    109102726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109102726
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109102726
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109102726
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     109102726
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109102726
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109102726
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109102726
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW DUF3292
Other DBs
NCBI-GeneID: 109102726
NCBI-ProteinID: XP_042594339
UniProt: A0A9R0AD64
LinkDB
Position
B14:complement(19214162..19224223)
AA seq 860 aa
MFPTGLPSPSPPPPAQEPRPAASDVHNDSNVSLTASKKRKINNSEKEDIDSISSSPKAIC
NSSSTTSSSSSSQQQHIQKKLRFEDPLDLIGLDVKMAEESCNSAESKARNVFLPGGVGHH
ANGLTKSAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTSI
KYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHVKAQIDQFREDALDSVLFLKKIDKCW
QDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLL
IERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVGEC
VYHLCKRMYGGADRVITYLDQSTQKHLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDL
SLLYQLFSRVKGGVQVLLQHWVEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDLIIDVC
FMRNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMII
FRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDME
LSKDIMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFYL
GKHSGRKLQWQSTLGHCVLKAEFKEGRKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGI
EDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVE
EQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESL
IDRDYMERDKDNPNQYNYVA
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctagtcccccaccgccagcccaagagcccagaccg
gcagcttctgatgttcacaacgacagtaacgttagcttaacggcttctaagaagaggaaa
attaacaattctgagaaggaagacattgattcaatatcttcgtctcctaaagccatttgt
aattcctcctccacaacgtccagctcttccagttcacagcagcagcacatccagaagaag
ttgaggttcgaggacccgctggatttgatcggactggatgtgaagatggccgaggagtcg
tgtaactctgccgaatccaaggcgaggaatgtgttcctgccaggaggtgtggggcatcat
gcgaacggactgaccaagtctgcgggctccgccaccttctccaacagcaaacccggcgct
gcgaagaaacttgttatcaagaactttaaagaaaagcccaaattaccagagaattacacg
aatgagacctggcagaagctgaaggaggcagtagaggccatacaaaacagcacttcaata
aagtacaatctagaggagctctatcaggctgttgaaaatttgtgctcacataagatatct
gccaagctctataaacagctcagagtggtctgtgaagaccatgtcaaggcgcagattgac
cagttcagagaggatgccctagacagtgttctgttcctcaagaaaatagacaaatgttgg
caagatcactgcagacaaatgatcatgattaggagtatatttttgtttttggatcgcaca
tatgttttacaaaattcaatgctgccatcaatctgggatatgggcttggagttgtttcgt
ttctatatcatcagcgacctgaaggtgcagagtaagacaatcgatgggattctgcttctt
attgagagagagcggagtggagaggccgtagaccgcagtctcctgaggagtcttctgagc
atgctctcagatctgcagatttatcaggattcatttgagcagcgctttctggaggagaca
aatcgactgtatgctgcagagggccagagactcatgcaggaaagagaggtgggtgagtgt
gtatatcatttatgtaaacgtatgtatgggggggcagatagagtcattacatacctagac
cagagcacacaaaaacacctcattgccacagtggaaaagcaacttcttggagaacacctc
actgcaatacttcagaaaggtttgaataacctgctggatgagaaccgtattcaagatctg
tctctgctgtaccagctcttcagtcgtgtgaagggaggtgtgcaggtgcttctgcagcac
tgggtcgagtacatcaaggcctttggaagcacaattgtcatcaacccagagaaagacaag
acaatggttcaggagcttttggatttcaaggataaagtcgatctcatcattgatgtgtgc
ttcatgaggaatgagaagtttgttaatggcatgaaggaggctttcgagacctttatcaat
aaacggccaaacaaacctgctgagctcatagcaaaatatgtggattcaaagctccgtgct
ggaaacaaagaagcgactgatgaggaacttgagaaaatgttggacaagataatgatcata
ttcaggttcatttatggcaaagatgtttttgaggccttctacaagaaagacttggcgaag
aggttactggtgggaaagagtgcctctgtagatgcagagaaatcaatgctgtcaaaactg
aagcacgaatgtggagctgcgtttaccagtaagctggaagggatgtttaaagacatggag
ctgtcaaaagatattatggtgcagttcaaacagcacatgcaatgccaaaatattccgggg
aacattgagctgacagtgaacatcctcacgatgggttattggccaacatatgtacccatg
gaagtacatctgcctccagagatggtgagattgcaggagattttcaaaacattttacctg
ggcaaacacagtggacggaaactacaatggcagtctacgttaggacattgtgttttaaag
gcagaattcaaagagggcagaaaagagctgcaggtttccctttttcagacattggttctg
ctgatgtttaatgaaggggaggagttctctctggaggatattaaacttgctacaggcatt
gaggacggtgagctgaggcggactctgcagtcactggcctgtgggaaggcacgtgtcctt
accaaaatcccaaagagtaaagacgtggaggatggagacaagttctcttgtaatgatgat
ttcaaacacaaactcttcaggattaaaatcaaccagatccagatgaaagaaacggtggag
gagcaagccagcactacagagagagtattccaggaccgtcagtaccaaatcgatgctgcc
attgttcgaatcatgaagatgaggaaaactctcagccataaccttctggtgtctgaagtg
tacaaccaacttaaattcccagtcaagcctgctgatctgaagaagaggatagagtcactt
attgacagggactacatggaaagggataaggacaatcccaatcaatacaactatgtggct
tag

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