Cyprinus carpio (common carp): 109102826
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Entry
109102826 CDS
T05134
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar02010
ABC transporters
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109102826
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109102826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109102826
Transporters [BR:
ccar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109102826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
MukB
Motif
Other DBs
NCBI-GeneID:
109102826
NCBI-ProteinID:
XP_042594011
Ensembl:
ENSCCRG00000016258
UniProt:
A0A9Q9X3Q2
LinkDB
All DBs
Position
B14:complement(11373953..11407526)
Genome browser
AA seq
2282 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQSNTAGFKLKDFLRENETLSMFLQQNASFSHNHVQNILEADVNLE
KVLLKGFGVHLRDMCNTTTLEDFVSIPDERLARFTQDLICSAPNSWLDQAERHFKSNLDF
LKPIRSDIRTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSNNDSDNEPVSVYDNTTTPYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMW
EEARPKVWNFIENSEEMDLIRTLLRNNATASFFSAQLAGTQWSVEDVTSFLSKHSEDTRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKMVNESMSLLDNRKFWAGIV
FLDIQSNSSKLPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFTYLQ
DIVEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCLILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGESNTNNTAVHGKKGNAGAVCIEEEPTHLEL
GVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEDVKAEMEQILT
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RTGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPS
LSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGTTWPESPVVPVDVDLISS
LILKHVPASRMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLGISSYGISDTTLE
EIFLKVAEDSGVDTEIISDGTLPVPRHRRHAFGADHQSCLKPLTEDDDFDCNESDGDPES
KETDYLSVSNGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIAL
VFSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDISTQKLLNALLDDPGFGTRCMEGE
PIPDAPCTMGDEEWSTQEVAESVMDIFMSTNWTMDNPSPACECSCNGKKKMLPECPAGAG
GLPPPQIKMSETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST
QVLPPAEEIDDAISRVREIFQLEKDSGSAADRFLKSLSTFINGLDTKNNVKIWFNNKGWH
SIGAFLNVMNNGILRANLPAGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMCNYVVPATLVILI
FVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVSTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRF
RSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEPKSLSAKLSPIGEEDEDVARERQ
RIMSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKE
VCEVAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKAR
RALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IILKVAGPDPDLQPVMKFIESELPGSTLKEKRREILQYQLPSSLTSLAHIFSILAKNKEF
LRIEDYSVSQTTLDQVFVNFAMDQSDDHFDSSIRRKETAVNMALLSPLSAKENTEKPIES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgttgtggaagaacttcacctacagaaggaga
caaacactccaactgctgacagagattgtgtggcctctctttattttcttcatcctgatt
gctgtgaggttgaactacccgccttatgaacaacatgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacacccaacccccggggaatctccaggagtcgtaggaaacttcaacgattcc
ataatctcacgcctgttttcagatgccaagaagatcttactgtacagtcaaaatgacaag
agcttagatggattcaaggagcttatcagtgcagtgaaagtcatgcaaagcaacacagct
ggtttcaagctgaaggacttcctgcgtgaaaatgaaaccctttccatgttcctccagcaa
aatgcctccttttcccataatcacgtgcagaatattttggaagctgatgtaaatcttgaa
aaggtgctgctcaaaggttttggcgtccatctgagagacatgtgcaacaccaccacactt
gaggattttgtgagcatcccagacgaaaggttggcgagattcacccaggacctcatctgc
agcgctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttt
ctcaaacctattaggtcagacataaggactaatgccactgatgtccgtctagttgccaaa
gctacagacaaccttctggaaagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgagatcctgtttctgacagaaaacgccaccggctcgccg
agtctgatgtaccaggctgtgtcccgtatcgtgtgtggacacccggaaggtggtgggctc
aagatcaaatccctcaactggtatgaggacagcaacttccaggcgctgttcggcagcaac
aacgacagtgataacgaaccagtttcagtctatgacaacaccaccactccatactgtaac
aacttgatgaagaacatggaagccagtcctatctctcgaatgatctggagagcattgaaa
cctctcttgatggggaagatcctctacacgccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacatttcaggagctcggaattctacgagatttaggtggaatgtgg
gaagaagccagaccgaaggtttggaacttcatagagaacagtgaagaaatggatctgata
cggacgcttcttcggaacaatgccactgctagtttcttcagtgcccagttggctgggact
cagtggagcgtggaggatgttacaagcttcttgtctaagcactccgaggacacgcgtccc
catggaacagcatttacgtggcgggatgtcttcaatgagacagatcaggccattatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgtgagcacagaggag
aaaatggtgaacgagtccatgagtctcctggataacagaaagttttgggcgggaattgtg
tttctggacattcagtccaacagttctaaacttcccccacacgtcaattacaagatccgc
atggacatcgacaatgtagagcgcacaaacaagattaaagatgggtattgggatcccggt
cccagggctgatccgtttgaagatttgcggtatatttggggaggatttacttacctacag
gatatagttgaacacagcatcatcagagcagttactgggaccaaagagaagactggtgtt
tacatccaacagatgccttatccatgttatgtagatgatattttccttcgtattatgagc
cgctccatgccgcttttcatgactctggcctggatgtactcagtggccatcatcatcaaa
ggcgtcgtctatgagaaggaggcccggctcaaggagaccatgaggattatgggattggac
aatggaatcctgtggttcagttggttcattagcagcctcatccctcttctcatcagcgca
ggcctgctggttcttctactcaagatgggtaatctcttgccctacagtgaccctggcgta
gtcttcctcttccttggatcattcgctgtggtaaccatcatgcagtgttttctaatcagt
acagtgttcgcacgtgccaacctggcagcggcttgcgggggcattatctacttcaccctc
tacctgccttatgtgctctgtgtggcttggcaagactacgtgggcttcagcgccaaagtc
attgctagcttactgtctccagtggcatttggatttggctgtgagtattttgccctgttt
gaagagcagggtgtgggcatccaatggaataacctcttctccagcccaatggaagaagac
aactacaacctcaccacctgcctcatcctcatgtactttgatgccttcctgtatggggtc
atgacctggtacattgaggctgtgttccctgggcagtatggcattcccaggccatggtac
ttcccttttactaaatcctactggtttggagagagcaacacaaacaatactgcagttcat
ggaaagaagggcaatgctggagctgtctgcattgaagaggaacccactcaccttgaactg
ggagtttacattaagaatcttgtgaaggtctaccgtcatggcaagaagctagcagtcgat
gggttgacgcttggcttctatgaggggcaaataacttctttcctaggtcacaatggagct
ggaaaaacaaccaccatgtctatcctaactggcctattccctcccacctctggcactgca
tatatcatgggcaaagatattcgctcagagctcagttccatcagacggagcctcggagtg
tgtccacaacacaacgtcctcttcagcatgttgacagtagaagagcacatctggttctat
gcccgtctgaagggtctttctgaggaggacgtgaaggctgagatggagcagattctgaca
gatactggccttccacacaaacgcaagtccaggaccagccagctgtcaggtggtatgcag
aggaaactctcagtagcccttgcttttgttggagggtcaaaggttgttattttggatgag
cccactgctggtgtggacccatacgctcgaagaggcatctgggaccttcttctgaagtat
cgtacaggtcggactatccttctttccacccatcatatggatgaagcggatattctgggc
gatcgtattgctatcatctcccatggaaagctttgttgtgtgggctcttcgctctttctt
aagactcaattgggaactggatactatcttaccttggtaaagaaaaacactgagccttct
ctcagctcttgcaggaactcaagcagcactgtgtcctttgttaagaaagatgacaatgca
tctgagagcagttcggatgctggtctaggtagtgatcaagagagcgaggccgccacagca
ataggaactacatggcctgaatctcctgttgttcctgttgatgtagacctcatctccagt
ctaatcctgaagcacgttcccgcttctcgcatggtggaagacctcggtcatgagataaca
tatgtgttgccgtacgagtctgccaaagatggtgctttcgttgagctcttccatgacctg
gatgatcggctcgctgaccttggcatttcgagctatggtatctcagatactacacttgaa
gagattttccttaaggtggcagaggacagtggagttgacactgaaatcatctcagatgga
acattgccagttcccagacatagacgacatgcattcggtgctgaccaccagagctgcctc
aaacccctgactgaagacgatgactttgactgcaacgaatctgacggtgatccagaatca
aaagaaacagactatttgagtgtttccaatgggaaaggatcctatcaagtgaaaggctgg
agtttgaagaggcagcagtttgtggctttattgtggaagagatttctttatgctcgccgc
tcaaggaaaggcttctttgcacagattgttcttcctgctgtgtttgtgtgcattgctctg
gtattcagtcttattgtgccaccattcggaaaatatcccagccttgctctcaatccctgg
atgtatgaagaacagttcacattcatcagtgatgatgctccacatgatataagcacacaa
aagttactcaacgctttattagatgatcctggctttggaacacgatgcatggaaggagaa
ccaattcctgatgctccctgtacaatgggcgatgaggaatggtctacacaagaagtggca
gaaagcgtgatggacattttcatgtcgacaaactggaccatggacaacccatcgcctgct
tgtgagtgcagctgtaatggcaaaaagaagatgctcccagaatgccctgctggtgcaggt
ggactgccacctcctcagattaagatgagtgaaactgagacgctccagaacctgacggga
cgaaacatctcagactatcttgtgaagacctatgcacagatcattgggaaaagcttaaag
aacaagatatgggtgaatgaattcagatatggaggattttcattgggagctagaagcact
caggtgcttcctcctgctgaagagatcgacgatgccatctctagagtcagggaaatcttc
caactggagaaggactcaggatcagcggcagaccgtttcttgaaaagcctgtctaccttc
atcaatgggctggacactaagaataatgtcaagatatggttcaataacaagggctggcac
agtattggagccttcctcaatgttatgaacaatggtatcttgcgtgccaacttaccagct
ggcaaagaccctcgtcagtttggcatcactgcgtttaaccatccgctcaatctgaccaag
gaacagctttctcaagtggccctaatgaccacctcagtggacgtgctggtttccatctgt
gtgatcttcgccatgtctttcgtccccgccagcttcgttgtcttcctcattcaggagcga
gtgaataaggccaagcacatgcagtttatcagcggagtgcagccatatctctactggttg
gccaactttctctgggatatgtgcaattatgttgttcctgctactctggtgatcctgatc
tttgtgtgctttcaacaaaaagcctacgtctctgcaaccaacctgcctgttcttgccctt
ctgctgcttctttatggatggtccatcactcctcttatgtacccggcttcattcctcttc
aaaatccccagcactgcttacgtggtgctcactagtgtcaatattctcattgggatcaat
ggcagcgtgtccacttttgtcatggagttatttggaaataatgagattggtggcatcaat
gacatcctgaagaacgttttgctcatcttcccacatttctgccttggtcgaggtctcatc
gacatggtgaagaatcaggccatggctgacgctctggagagatttggtgagaaccgtttc
cgttctccattggagtgggacatggtgggcaagaatctttttgctatggctgtggaagga
gtggttttcttcatcatcacagtccttatccagtaccgtttcttctttgaacccaagtct
ttaagtgccaagttgagtcccattggagaggaagatgaggatgtggccagagagagacag
agaatcatgagtggagctggacagggagacattcttgaactcagacaactcactaaggtg
tacaagcggaaacagaagcccgctgttgatcgtctgtgtgttggcattcctccgggagag
tgttttggtctgcttggtgtcaatggagccggaaagacaagtacttttaaaatgctgacc
ggagactctgtggtcaccaaaggagaagcattcttggctgggaaaagtatactcagagaa
atagatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaatgatctg
ctgacaggacgggaacacctggaattctatgccatcctgcgcggtgtacctgagaaggaa
gtttgtgaggtggcggagtggggaatccgtaaactaggcctcgtgaagtacgtggacaag
aaagcaggaagctacagcggtggcaacatgcgcaaactctccaccgccatatcactcatt
ggagccccaccagtggtcttcctggatgagcccaccactggaatggaccccaaagcacga
agagcactgtggaactgcatccacagcgtaatcaaagagggacgctctgtcgtacttacc
tcacacagtatggaggaatgtgaagcactgtgcaccaggatggccatcatggtgaacggc
aggttccgatgtctgggtagcgtccagcaccttaagaacagatttggcgatgggtacacc
atcattctgaaggttgcggggccagatcctgacctgcagccggtgatgaagttcattgag
agcgagctgccaggaagcaccctgaaagaaaaacgaagagaaatattgcaataccagctt
ccctcctccctcacctccctcgctcacatcttcagcatcctcgctaagaacaaagagttt
ctcaggatagaggactactctgtgtcccaaaccactctggaccaggtatttgttaacttt
gccatggaccaaagtgatgaccactttgacagctccattcgtcgtaaagagacagcggtc
aacatggccctcctgagccctctgtctgctaaagagaacactgagaagccaatagaaagc
tttgtgtga
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integrated database retrieval system
