Cyprinus carpio (common carp): 109102832
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Entry
109102832 CDS
T05134
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109102832
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109102832
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109102832
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PAAT-like
Motif
Other DBs
NCBI-GeneID:
109102832
NCBI-ProteinID:
XP_042590449
UniProt:
A0A8C2BT97
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All DBs
Position
A3:complement(5470970..5478314)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPESATPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgatgttgacaacgagctgctggattatgaagaggacgaggagcctcaa
ggggccccggagagtgccactccagtgggcaagaaggaggtgaagggctcttatgtgtcc
atccacagctcgggcttcagagactttctgctcaagccggagctgctgagggccatcgtg
gactgcggttttgagcatccgtctgaagtgcagcacgagtgcatcccgcaggccatcctc
ggcatggatatcctgtgtcaggccaagtctggtatgggaaagacagccgtgtttgtgctc
gctaccctacagcagatcgagccggtggatggacaggtgtcggtgctggtcatgtgtcac
acgcgtgagctggcgtttcagatcagtaaggagtacgagcgcttctccaagtacatgccc
acggtgaaggtggctgtgttcttcggcggcatgtccataaagaaggacgaggacgtcctg
aagaagagctgccctcacatcgtggtcggcacgccgggacgaatcctcgccctggtccgg
aacaaaaccctcaacctgaagaacgtcaagcacttcgttctagacgagtgtgacaagatg
ctggagcagctggatatgagacgtgacgttcaggacatcttcagactgacccctcatgag
aagcagtgcatgatgttcagcgccaccctcagcaaagagattcggcccgtctgccgcaag
ttcatgcaggacccgatggaggtgtttgtggacgatgagacgaagctgactcttcatggt
ctgcagcagtactactgcaaactgaaggacagcgagaaaaaccgcaaactcttcgacctg
ctcgacgtgctggagttcaaccaagtggtgatattcgtaaagtctgttcagcgttgtgtg
gcgctgtcacagttactggtggagcagaacttccccgccatcgccatccacagaggaatg
gctcaggaagagaggttgtctcggtatcagcagttcaaagactttcagaggaggatccta
gtggccacaaaccttttcgggcgaggaatggatatcgagagggtcaacatcgccttcaac
tacgacatgccagaggactcggacacgtatctccacagggtggctcgtgcgggtcgcttt
ggcaccaagggtttggccatcacgtttgtgtcagatgagactgatgcaaagatcctgaac
gacgtacaggaccgattcgaggtcaacgtggcagagttaccggaggagatcgacatttcc
acttacattgaacagtccagatga
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