Cyprinus carpio (common carp): 109102893
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Entry
109102893 CDS
T05134
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109102893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109102893
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109102893
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109102893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
HMG_box_2
Nop14
Motif
Other DBs
NCBI-GeneID:
109102893
NCBI-ProteinID:
XP_042593720
Ensembl:
ENSCCRG00000026214
UniProt:
A0A9Q9X248
LinkDB
All DBs
Position
B14:4284788..4304005
Genome browser
AA seq
1700 aa
AA seq
DB search
MLFSKETPWRRLEGMSFGLFSADEIRKLSVKSITNSQLLDNVGNAAANGLYDLALGPADN
KEICSTCMQDFTSCPGHFGHVDLPLPVYNPMFFDKLYLVIRGSCLGCHMLKCPRTAVHLL
LGQLKLLDVGAMKEVYELENVLNQLVEVNAQPSGIEIQEALEAFIAPILKANEDKQHSAP
IKHICEKKSSLINSFWRIHMGPRKCPNCRASRVTVRREHNSKLIVTHGSSTASTEKDDDP
LITKRGFLTPSLAREHVIKLWEKEGFFLKHLFAGFDMNNSEKGFSPEVFFLELLVVPPCR
YRPVNRLGDQMFTNGQTVNLQAVLKDNFMIQKLLALIAAEKTKAAEDTQTEMEQSSESTE
ISQIDQTFLTGIQGLTLTDKLYNMWIHLQSHVNIVFDSDMDKLMTEKFPGVRQLLEKKDG
LFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLN
GPSVHPGASMVINEDGSRTILSSSNLTQREAVAKQLLTPSTGQHKIPMKIVNRHIKNGDV
LLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAE
AYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGTNMTVRGCFFTRDQYTALVYRGLTDKIGR
VKLLPPALFKPVPLWTGKQVVSTLLLNVIPENSIPLNLMGKAKIPSKAWVKEPPRAVPGY
RPETMCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTA
YLQLYRGFTLGVEDILVKDGANKQRRKIIQKSVTCGSKALQAAFNLPAAAGDTEARERWQ
DAHLNTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQLMVQSGAKGSTV
NTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFH
CMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIP
KTQFLQPQQFPFIKDNYEVIRKSKCLDEVLAKMDTGATFSHFKAIKRWKAKHERVSPRDG
AFLLYSQKKLSKLKSQIEDQTLANGRETATLQLLENWRALDESGRMKYLKKTSHCPDPCL
ALYRPDICFGSVSETFDSIVESYLDRFSVKQEFQTSSEIIDTDRLRHLLQLKWQRALCDP
GEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSIP
VRMNKKALKRVKTLRKKITRVCLSEVLHKVDVIETFRLVEKRRQKSRVFKLTFHFLPPER
YQQDKLLTPDEILHFMEQKFFRMLLEAVKKLSAKLAAVNVVDTRKATANDNDRDAGGVAD
KEDDGDEDAENNRIVDDEANEGDADATDSRRKEKQEEEVDYESEEGEEAVDEELEDVDED
RQEEADTQENSEEGSGESQSADQTQSPDISEELEGASQDSMRISTVLQLSPAIEDYKYDT
KNGLWCELTLVLPLTKVHFDLTSVVVKQAQNAVIMETKGITRCLLNEVTTKEGKKEMVLN
TEGINMHEMFRHADILDLNRLYSNEVHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPR
HLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKQATMLGSYDKLSSPSAC
LVVGKVVKGGTGLFDLKQPL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaaagaaacgccatggaggcgattagagggcatgtcgtttggtttgttc
tccgccgatgaaataaggaagctgagtgtgaaaagtatcactaattcccaactgctggat
aatgtgggcaatgccgccgctaacgggctgtatgacctggcgctgggtccagctgataac
aaggagatctgctccacctgcatgcaagacttcaccagctgtcctggacacttcggtcac
gtagatctgccccttcccgtctacaaccctatgttttttgataaattatatttggtcatc
cggggttcatgcctgggatgccatatgttgaagtgtcccagaacggctgttcatttgctg
ctgggccagctgaagctcctggacgtgggtgcgatgaaggaggtgtatgagctagagaac
gttctcaatcagctggtggaggtcaatgctcagccgtctggaatagaaatccaagaagct
ctggaggcgttcattgcacccattctaaaagcaaatgaagacaagcagcacagtgccccg
atcaaacatatctgtgagaagaagtccagtctcattaacagtttctggagaatacacatg
ggcccgaggaaatgtccgaactgcagagccagcagagtgactgtgcgcagagaacacaac
agcaaactcatcgtcacacatggatcatccacagcaagcacagaaaaggacgatgatcca
ctgattaccaaacgtggattcttgaccccgagtttggcgcgagaacacgtcattaaactc
tgggagaaagaaggtttcttcctgaagcatctgttcgcagggtttgatatgaataattca
gagaaaggcttcagtcctgaagttttctttttggagttgcttgtggttcctccatgcagg
tacagacctgttaaccgtttgggagaccagatgttcaccaacggacagactgtgaacctg
caggccgtgttaaaggataatttcatgattcagaaactgctcgcactgatcgctgctgag
aagaccaaagctgctgaagacacacagacagagatggagcagtccagcgaatccacagag
atcagtcagatagatcagaccttcttaacgggcatccaagggctgactctcacagacaag
ctctataacatgtggatccacctgcagagtcacgtcaacatcgtgtttgacagcgacatg
gacaaactgatgactgagaagttcccaggcgtccgtcagctcttggagaagaaagatggt
ttgttcaggaagcacatgatggggaagcgtgtggattacgctgcacgttcggtcatttgt
cctgatatgtacatcggaaccaatgagattggaataccaatggtttttgctaccaagttg
acgtacccacagccggtgacaccctggaacgtgaaggaactccggcaggcagtgctgaat
ggacccagcgtccaccctggagcctccatggtcattaatgaagacgggtcccgaaccatc
ctcagcagcagcaacctgacccagagagaagccgtggccaaacagctcctgacccccagc
accggccagcacaagatacccatgaagattgtaaatcggcacatcaagaatggggatgtc
ctgctgctaaaccgtcagcccactctccacagaccatcaattcaggcccactgtgcccgc
atcctgcccggagagaaagtgctcagattacattacgccaactgtaaggcctacaacgct
gactttgacggtgacgagatgaacgctcacttccctcagagtgagctgggcagagctgag
gcctacacgctagtgagcacagaccagcagtacttggtgcctaaagatgggaagccattg
gcaggcctgattcaggaccacatggtgtctggcaccaacatgaccgtccgtggctgtttt
ttcacacgggatcagtacactgcgctggtctacagaggcctgacggacaagatcggcaga
gtgaagctcctgcctcccgcgctctttaaacccgtgcctctctggactggaaagcaggtg
gtgtcgacccttctgctgaatgtcatcccagaaaacagcatcccattaaacctgatggga
aaagcaaagattcccagtaaagcctgggtgaaggaacctcccagagctgttccaggatac
aggccggaaactatgtgtgaatctcaggtggtcattcgtcagggagaactcttgctggga
gttctggataaagcccactatggcagctcagcgtacggtttggtccactgctgctacgag
ctctacggaggagagaccagcggcaaactgctcagctgtctggcacgactcttcactgcc
tacctgcagctgtaccgcggtttcaccttgggtgtggaagacattctagtaaaagatgga
gccaacaaacagagaaggaaaattatccaaaagtcagtcacatgtggctccaaggctctc
caggctgcgtttaacctgcctgcagctgctggagacactgaagccagagagcgctggcaa
gatgctcatctgaacacagaccagcgagatttcaacatggtggacctgaagtttaaagag
gaggtcaatcaagtgaacaacaacatcaacaaggtgtgcatgccgctgggtctccaccgc
tccttcccagaaaacaacctccagctgatggtgcagtcaggagccaagggttccactgtt
aatactatgcagatttcctgtttactgggtcagattgagctggaaggccgccgaccacca
ctgatgccttctgggaagtccctgccctgctttcagccctatgaacctcagccgcgatcc
ggaggattcgtaactggcagattcttgacgggaatcaaacctccggagttctttttccat
tgtatggctggtcgtgaaggtcttgtggacactgctgtcaaaaccagtcgatctggttat
ttgcagaggtgtgtgatcaagcatctagaaggactggtggtccagtatgatctgactgtg
cgagacagtgatggaagtgtggtccagtttctttatggagaggatgggctggacatcccc
aagacccagttcctacagccgcagcagttccctttcatcaaagacaactacgaggtgatc
agaaagtcaaagtgtttggatgaagttctggctaaaatggacacaggggcaacatttagt
cactttaaggccatcaagagatggaaagccaaacatgagcgtgtttcacccagagacggt
gccttcctgctctactcgcagaagaaactgagcaagttgaagtctcaaatcgaagaccag
acactggccaatgggagagagacagcaactttacagctcttggagaattggagagctctg
gatgagtctggccgtatgaagtatttaaagaagacgtctcattgtccagacccgtgtctg
gctctttaccggccggacatctgcttcggttcagtttctgagacatttgactccattgtt
gagtcctacctggatcggttcagtgtcaagcaggaatttcagacctcctctgaaatcatt
gacacagatagattgaggcatctcctgcagctgaagtggcagcgcgctctgtgtgacccc
ggagaggccgtgggtctgctggcagctcagagcattggcgaaccatccacacaaatgacc
ctcaacaccttccacttcgccggcagaggagagatgaatgtcaccctgggtataccaaga
ttaagagaaatactcatggttgcgagctctaacatcaaaacccctatgatgagcattcca
gttcggatgaacaagaaagccttgaaacgtgtgaagacgctgcgaaagaagataactcgt
gtgtgtttatcagaggtgcttcacaaagtggatgtcatagaaactttccgcttggtcgag
aaacggagacagaagtcacgagttttcaaactcacattccacttcctgcccccagagcga
taccagcaagacaagctactcacccctgatgagattcttcatttcatggagcagaaattc
ttccgcatgctgctggaggccgttaagaagctgagtgctaaactggcggctgtcaatgtg
gttgatacacgcaaagccacggcaaatgacaatgatcgagatgctggtggcgtcgcggac
aaagaggatgatggcgatgaggatgcagaaaacaacaggattgtggatgatgaggcgaat
gagggtgatgcagatgccacagattccaggagaaaagaaaaacaagaagaggaggtagac
tatgagagtgaggagggagaggaggccgttgatgaggagctggaggatgtggatgaggac
agacaggaagaagcagatactcaggagaactctgaggaagggtctggtgaaagccaatca
gcagaccagacccagagtcctgacatctctgaagagctggagggagcttcacaggactcc
atgaggatcagcactgtgcttcagttgagccccgccattgaggactacaaatatgacacc
aaaaatggactatggtgtgagctaaccctggtcctacccctcactaaagtgcactttgac
ctcacgtcagtggtggtgaagcaggctcagaacgctgtcatcatggagaccaagggtatc
actcgctgcttattaaatgaagtcaccacaaaggagggcaaaaaagagatggtgctcaac
acagagggcatcaacatgcatgagatgttcagacatgctgatatcctggacttgaaccgg
ttatactccaacgaggttcatgctatggccaacacgtacggtattgaggtggccctcaga
gtcattgagaaggagattaaagatgtgtttgctgtctatggtatcgaggtggacccacgc
catctctctctagtggctgactacatgtgttttgagggggtgtacaagcctctaaacaga
tttggcattcaatccaacagttccccgctgcaacagatgacctttgagaccagttacaag
tttttaaagcaagcaacgatgctgggttcttatgacaaactcagttcaccctcggcttgc
ttggttgtaggaaaagttgtgaaaggaggaaccggcctcttcgatctgaaacagccatta
tag
DBGET
integrated database retrieval system
