Cyprinus carpio (common carp): 109102979
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Entry
109102979 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: lysine--tRNA ligase-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109102979
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccar01007
]
109102979
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccar03016
]
109102979
Enzymes [BR:
ccar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
109102979
Amino acid related enzymes [BR:
ccar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
109102979
Transfer RNA biogenesis [BR:
ccar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
109102979
Prokaryotic type
Other AARSs
109102979
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
POP1_C
Motif
Other DBs
NCBI-GeneID:
109102979
NCBI-ProteinID:
XP_042584570
UniProt:
A0A9Q9WJI9
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All DBs
Position
B7:39673459..39692141
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AA seq
660 aa
AA seq
DB search
MFVYAPPSDTLYLRHRMFQIQNTGFTVRGCCNLTEDHGEDGRRRCRGWRETQQKDVCIML
TLVRICRLQAFRLQTFALPSSQNLHLLIEGSRWRSGKSELKRRMKAEKKATEKEAKDKEQ
QEQKETNEKSQQDANEADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKFNVDLSLTEFI
DRYNNLQPGDHLTDVVLSLSGRIHAKRASGVKLLFYDLRGEGVKLQVMANSRNYKSEEDF
VHINNKLRRGDIIGVGATLGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLKDKETRFRQ
RYLDLILNDFVRQKFVTRAKIITHLRSFLDQLGFLEIETPMMNLIPGGAAAKPFITHHNE
LNMKLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYND
LIDITEKLLSGMVKHITGGYKVIYHPDGPEGQACEIDFTPPFKRISMTQGLEKELGVKFP
DPDTYDSDETRKFLDDLCVQKKVECSPPRTTARLLDKLVGDFLEVKCINPTFICDHPQIM
SPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKDKAEGDDEAMSI
DETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKPAPPADGTSV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgtatgctccgcccagtgacaccttatatctcagacaccgaatgtttcagatt
cagaacactggcttcacggtccgcggctgctgcaatttgacggaggatcacggcgaagat
ggcagacggagatgtcgtggatggagagaaactcagcaaaaagacgtttgcatcatgttg
actctggtcagaatatgcaggctgcaagcgttcaggctgcagacgtttgctcttcccagc
tcacaaaacctgcatttgcttattgaaggaagtcgctggagaagtggcaaaagtgagctg
aaaaggcgcatgaaagctgagaagaaagcaactgagaaggaagccaaggacaaagaacag
caggaacagaaggagaccaatgagaagtcacagcaagatgcaaatgaggcagatgaggaa
actttggacccaaatcaatacttcaagattcgttcacaagccattcaagccttgaaggga
acagctgaagacccataccctcacaaattcaacgtggacttatcgcttacagagttcatt
gaccgatataacaaccttcagccaggggaccacttgacagatgtcgtcctcagtttatcg
ggtcgtatccacgccaagagggcttcaggtgtcaagctgctgttctatgatctgcgagga
gagggagtcaagctgcaggtcatggccaactccaggaactacaaatcagaagaagatttt
gtgcacatcaacaacaaattaaggcgtggggacatcattggggtcggggcaaccctgggc
aagacaaagaagggcgagctgagcatcatcccgatcgagatgaccttgttgtctccatgt
cttcacatgcttccccaccttcactttggcctgaaagacaaggaaaccagattccgacag
cgatatctggacctgattcttaatgactttgtgagacagaagtttgtgacccgcgccaag
attatcacccatctccgcagctttctggaccagcttgggtttcttgaaatcgaaacacca
atgatgaacctgatacccggtggtgctgcagcaaaaccatttattactcaccacaatgag
ctcaatatgaaactctacatgagaattgctcctgaactttaccacaagatgttagtagtc
ggaggactggaccgtgtgtatgagatcggccgtcagttccgtaacgaaggcatcgatctc
acccacaacccagagttcaccacatgcgagttttacatggcttacgccgactataatgac
ctgattgacatcacagagaagctgctctcaggaatggtgaagcacattaccggaggttat
aaggtgatttatcatcctgatggtccagagggacaagcctgtgaaatagacttcactcct
cccttcaaacggatcagcatgactcaagggctggagaaggaattgggggtgaagtttcca
gatcctgacacctacgacagtgatgaaacacgcaagttcttagatgacctttgtgttcag
aaaaaagttgaatgctctcctcccaggactactgcccgtcttctggacaagttagtggga
gacttcctggaggtgaagtgcatcaatccaactttcatctgtgatcatccacagatcatg
agtcctctagcaaaatggcacagatcccagaaaggtctaactgagcgatttgaactgttt
gtgatgaagaaggagatctgcaacgcctacactgagttgaacgatcccatcagacaacga
gaactgtttgagcagcaggctaaggacaaggcagagggtgacgatgaggcgatgtctatt
gatgaaaccttctgcactgccttagagtatggccttccacccacggcaggatggggcatg
ggcatcgaccgcctcaccatgttcctcacagactccaacaacatcaaggaggtgcttctc
ttcccggccatgaaaccggaagacaataaaccagctccacctgcagatggcacatcagtg
taa
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