Cyprinus carpio (common carp): 109103074
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Entry
109103074 CDS
T05134
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X2
KO
K08524
retinoid X receptor alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03320
PPAR signaling pathway
ccar04148
Efferocytosis
ccar04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109103074 (rxrga)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109103074 (rxrga)
03320 PPAR signaling pathway
109103074 (rxrga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109103074 (rxrga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109103074 (rxrga)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109103074 (rxrga)
Nuclear receptors [BR:
ccar03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109103074 (rxrga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
109103074
NCBI-ProteinID:
XP_018971941
Ensembl:
ENSCCRG00000017015
UniProt:
A0A9Q9ZKC4
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Position
B2:12746444..12760534
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AA seq
438 aa
AA seq
DB search
MPLRYTESSSLQVTHGHLSSPSSQPPLSSMVSHHHPSIINGLGSPYSVITSSSLGSPSSS
LPTTSSMGYGALNSPQMNSMNSVSSSEDIKPPPGLAGLGSYPCSSPGSLSKHICAICGDR
SSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKDCQIDKRQRNRCQYCRYQKCLAMGMK
REAVQEERQRGREKSDNEVESSSSFNEEMPVEKILDAELAVEPKTEAYMESSTGNSTNDP
VTNICQAADKQLFTLVEWAKRIPNFSDLPLDDQVILLRAGWNELLIASFSHRSVTVKDGI
LLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLS
NPSEVEALREKVYASLEAYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD
TPIDTFLMEMLEAPHQIT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgagatacactgagagttcttctttgcaggtaacacatggtcacctgagctct
ccttcgtcccagcctcctctcagctccatggtgtcccaccatcacccctccatcatcaac
ggtctagggtcaccatactcagtcatcacttcctcctctctgggctcaccttcatcctcc
ttgcccaccacctccagcatgggctatggagcgctcaacagtccacagatgaactctatg
aacagtgttagcagctcagaagacattaaacctcctccagggctggcgggactgggcagt
tacccctgcagcagcccggggtccctctccaaacacatctgtgccatctgtggagaccga
tcctcggggaaacattatggtgtttacagctgtgaaggatgcaagggcttcttcaagaga
actatccggaaagacctgacgtacacgtgtcgagacagtaaagactgccagattgacaaa
cgccagcgtaaccgctgccagtactgccgctatcagaagtgtctggccatgggcatgaag
agagaagcggtgcaggaagagaggcagcggggtcgggaaaagagtgataatgaggtggag
tctagtagcagctttaatgaagaaatgccagtggagaagattctagatgctgaacttgca
gtggaacccaagactgaggcttacatggagtccagcacgggcaactcgacaaatgaccca
gtgaccaacatctgccaggctgcagacaagcagctctttactcttgttgagtgggctaag
agaatcccgaacttctctgaccttcctctggatgaccaggtcatcctgctgcgagcaggt
tggaacgagctgctcatcgcttcattctcacatcgttctgtgacggttaaggatggaatc
ctgttggccaccggcctgcacgtccatcgcagcagtgctcacagcgcaggggtcggctct
atatttgacagggtattaacagagctagtgtctaagatgaaggacatgcagatggacaag
acggagctgggctgtctaagagctatcgtcctctttaacccagatgcaaaaggattgtca
aacccatcagaggtcgaggcattacgggaaaaagtgtacgcttcactggaggcctacacc
aaacacaattaccccgatcagcccggcaggtttgccaagctgctcctccgtctgcccgca
ctgcgctccataggactgaagtgcctggagcatctgttcttcttcaaactcatcggagac
acacctatagacactttcctcatggagatgctggaggcgccgcatcaaatcacatga
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