Cyprinus carpio (common carp): 109103212
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Entry
109103212 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family member X1-like
KO
K12653
NLR family member X1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109103212
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109103212
04622 RIG-I-like receptor signaling pathway
109103212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109103212
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109103212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRX1_C
LRR_NLRC3
LRR_TMOD-LMOD
NLRC4_HD2
LRR_6
LRR_CARMIL
WHD_NOD2
Pox_F15
Motif
Other DBs
NCBI-GeneID:
109103212
NCBI-ProteinID:
XP_042610134
Ensembl:
ENSCCRG00000026027
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MWRFGRPSGTEVLRWRCQGSPRDLCCKLHIRAFQKTFNLNLRSVGICGSVNRHHFSFPTK
TTSSYRHAWRELRTSMCYSISGFNHRFFCTCEPVADPIEIHKQKLTLWFSHLPREERQFG
GYFSPETMHVEPLIVEQHPDEDRGLNPFKEKTGISTRPSLTPEQLFDANNNGNKARGLND
LVYGAVKTTKITKLMLDWCAXSLYPISNHFKLVLPFSCEDLSHLSKPTSLRDLVGRKYMH
LRKTPYLSGDNDKAKDVLFIFNGMEKMKLDFRIGSTELCSDPNEALPSGAVVVNLLRKYM
LPEASILVTTRLSAVDRVPKKYINRYVQICGFNDPHRQRAYFTSRLLQQNEGKPGMAADT
LIEMLYLNLQRESQLATACFLPTYCWLTCATLHLLHFTDTKSPIRTLTGIYTSFMKLNFG
GEVITVDGNVSSQEQQNSLMLYVVRTVGKLAFDGITNKRTSFSAEELEQWVGGKTKTDEE
LQQLAVFRTDVLDFFLVPRNDHGTDPESGGRRYVFAVPAMQEYLAALYVVLGENKSILEK
LTKEVSEALGQASEDITSLLSILSKSSTYLSESSFAVFNLLKLFPKLFERVSSLSKGRIA
DTMTAEMFRSEDSFNEDVLDQVEQSLLGVHGPQPQEETYTRAFELYPIFMGGLLHYGNRR
LLDQLGCSIKSHTVSQITHVLRKHLIKESQKKQPPEELMDLLVLLYEFQNPRLTAEVLQS
IKTINLSNVRMTPKNSSVLSTVLSCTSSRFHLNKLNLSSCHITPELLQMLWPAFHHTSNL
NLQFNSLGPESCILLRDLLLEPNCTIKSLQLCDNYLTDAGISHLLEALSGNHSLQRLCLM
HTGLGDRSAQMLAERLGQHDMLQELNVAYNNIGDSAALTLVDACREHPSIHTVHLYLNQL
TDVAKQSLYVRGGPRVKEGRRVKVLASVTEGSDISEDWHPILSVIGKNSLSWDRDRVREQ
LLVFLKDLEWGRKQHQSFWKKMHFRRVESVVRQMLRLLEKSSDTGTGTSTKLCNYRRS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgatttgggaggccatcgggaacagaagtgttaagatggagatgccaagggtca
ccaagagatctctgctgcaaacttcacatcagggcttttcagaaaacctttaacttaaac
ctccgatcagttggcatctgtggtagcgtaaatcgccatcacttctcatttccaaccaag
acaacaagctcttatagacatgcatggagagaactgagaacatctatgtgctattccatc
tctggattcaaccacaggttcttttgtacctgtgaacccgtcgcagatcccattgagatc
cacaaacagaagctgacattatggttcagtcaccttcctcgagaggagaggcaattcggt
ggctacttttctcccgaaactatgcatgtggagccacttatcgtagagcaacatccagat
gaggacagaggtcttaatcccttcaaggaaaagacaggcatatctacacgtccctctctc
acgcctgagcagctctttgatgctaacaataatggaaacaaggcacgaggactaaatgat
ttggtttatggggctgtcaaaacaactaaaatcactaaactcatgctggattggtgtgct
tgatctctttatcccatttcaaaccatttcaaacttgtgttgcccttctcctgtgaggat
ctttcccatttatccaagccaacgtcccttcgagaccttgtgggcaggaaatacatgcac
cttcgcaagacaccttatcttagtggagataatgacaaggctaaggatgtcctcttcatc
ttcaatggaatggagaagatgaagctggattttcgcatcggttccacagagttatgcagc
gatcccaatgaggctctcccatcaggagctgttgttgttaatctgcttaggaaatacatg
ctacccgaggccagcattttggttacaacgagactatctgctgtggacagagttcctaaa
aaatacataaatcgttatgtacaaatctgtggcttcaatgatcctcatcgccagagagcc
tacttcaccagcaggctcttgcaacagaatgaaggcaagccgggaatggcggccgacacg
ctcatagagatgctttacctaaatctacagcgggagagtcagttagcaaccgcctgcttc
ttaccaacttactgctggctcacatgtgccactcttcatttattgcattttactgataca
aagtcaccaattcgaaccctcactggcatctacaccagcttcatgaagctcaactttgga
ggagaagtgataactgtggatggaaacgtctcatcacaagagcaacagaactcattaatg
ctctatgtggtccgtactgttggtaaactagcttttgatggcatcaccaacaagcggacg
tcgttctccgctgaagaactggagcagtgggttggcggaaagactaaaacggatgaagag
ctccagcaactagctgtgtttcgcacagatgtgcttgacttttttctggttcctcgcaat
gatcatggtacagatcccgaatctggtggtaggcgctacgtgtttgctgttcccgccatg
caggaatatctagccgctctttatgttgttcttggcgagaacaaaagcatcctggagaag
ttgactaaggaggtttcggaggctttgggacaagccagtgaggacatcacaagcctcctg
agcatcctctctaaatcatccacatacctttccgaatcttcttttgccgttttcaatttg
cttaagttgttcccgaaactctttgagcgagtcagcagcctcagcaaagggcgtattgca
gacaccatgacggcagaaatgtttcgttcggaggacagcttcaatgaagatgttttggac
caggtggaacaaagtctgctgggagtgcatggtccacagccacaggaggaaacctacaca
agagcgtttgaactctaccctatcttcatgggtggacttcttcattacggaaaccggagg
ctgttagaccagcttggatgcagcatcaagagtcacacagtttctcagatcacccatgtg
ctgaggaaacacctgatcaaggagagccagaagaagcagcctcctgaggagctcatggac
cttctggtcctgctctatgagttccagaaccctcgactcacagctgaagtcctacagtcc
atcaagaccatcaacttgtcgaatgtgcgcatgacgccaaaaaattcctcggtgctgagc
acggttctgagttgcacaagctcaaggttccacctgaataagctcaacctctcctcctgc
cacatcactccagagttactgcagatgctttggccagccttccatcacactagcaacctc
aatctccagtttaacagcctgggtcccgagtcctgcattctgctgcgagatctcctgctt
gagcccaactgtactattaagtcattacagttgtgtgacaactacttgacagacgccggc
atcagccatctactggaagctctgtctggtaaccactctctgcaacggctgtgtctgatg
catactggcctaggggaccgatcggcacaaatgctggctgagagactgggccagcatgat
atgttacaggagctgaatgtggcctacaacaacattggagacagtgcagctctcacgctg
gtcgatgcctgtcgtgaacatcccagcatccacacagtacacctgtacctgaaccagctt
accgatgtggccaaacagtcgctgtacgtgcgtggaggtcctcgggtcaaggagggccgg
cgggtgaaggttctggcctctgtaacagagggttcggacatctcagaggactggcatccc
attctgagcgttattggaaaaaattctctttcctgggacagagaccgtgttcgcgagcaa
ctgctggtcttcctgaaagatctggaatggggtcgcaaacagcaccagagtttctggaaa
aagatgcacttccgacgagtggagagcgttgtgaggcaaatgctgcgcttactggagaag
agcagtgatactggaacagggaccagtacaaaattatgtaactatcgtagaagttaa
DBGET
integrated database retrieval system
