Cyprinus carpio (common carp): 109103309
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Entry
109103309 CDS
T05134
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109103309
03041 Spliceosome [BR:
ccar03041
]
109103309
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109103309
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
109103309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109103309
NCBI-ProteinID:
XP_042596134
Ensembl:
ENSCCRG00000032084
UniProt:
A0A9Q9X6G7
LinkDB
All DBs
Position
B15:complement(28037659..28071544)
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AA seq
812 aa
AA seq
DB search
MDMEAVNAFNGEMLSMMDMTPPISRAKMMSVTKAGIKAIKLYKHVVQIVEKFIKRCKPDL
KVAGLYVVDSIIRQSRHQFGTDKDLFGPRFLKNFTVTFQNLFQCPADDKGKILRVLNLWE
KNDVFSMDIIQPLLDMATAHELPLVENGITAAAPPVVPVPVEMAVPEPAPAPAPAVETAA
VPPSFQNPVALAAVAQLLQGTGGIELQQLIQTLQQAGGAGLAQSTAPPPEQKPSLAKSLL
DRFDYDDDPEPVEEKTEPAPAAPITINLPPELQQALQAHLLSQIVNQTQMQGQMMSQGQV
PSQDQMAPQEFPAMVQTQIPDNTPQVFDESVIQPGTNQQASAENERSVHDGRDRRHSRRT
RSRSPQRLSSSRSGRSRSGSRSRRERSRYHRTRSRSRERRGRSPQARSEERRDREKERER
RQKGLPPIKKETLSVCSTTLWIGQLDKKTQQQDIMSLMEEFGQIESINMIPPRGCAYIVM
VHRQDAYTALNKLSRGVVKVNQKTIKIAWALNKGIKTDLKKFWDVERGVTYIPWDKVKAD
DIRSLQEGGLLDAETLKPEWKSVMANPAVPVTEGPEGKQEEGAALPAVSQSHSVQPVAAM
NVVPGPPLNMRLPPPAMITGASPPSFAPLGFNPPQMSAGFAPAVPVASLNPAGPPPSVTE
TLIEEPSDESHEDLTGAQALSSPPIGGILGPRPGPLPPHAPVGLRPPFMPPFANNGPRPI
LPPPNMPPQMMPPRGPNPMFGEPPVGRFRMRMMGPPRHDFPRHRLPVHPRGEEPHWRDQG
PERGPDRFGNEPPFHRGGWGRGGPRGRSRFGN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaagcggtgaacgcctttaacggggagatgctgtccatgatggacatgact
cccccgatctctcgagccaaaatgatgtctgtcaccaaagcgggaatcaaagctatcaag
ctttacaagcacgttgttcagatcgtggagaagttcatcaagaggtgtaaaccagaccta
aaggttgcgggtctctatgtggtcgactcaattatccgacagtcacgccatcagtttggc
acggacaaagatttgtttggcccgaggtttttgaaaaacttcactgttacatttcagaac
ctcttccagtgcccagctgatgataaggggaagatattgcgtgtgctgaatctgtgggag
aagaatgacgtgttcagcatggacatcattcagccgctgttagacatggccacagctcat
gaactacctctagtggagaatggaatcacagccgccgcgcctccagtcgtaccagtgcca
gtggaaatggcagtgccagagccggcaccggcaccagcaccagcggttgagacggcagca
gtcccgccctcgtttcagaacccagtggcccttgctgcggtcgcccagctcctccagggc
acagggggcatcgagttacagcagctgatccaaactctccagcaggctggaggggcgggg
cttgctcagtccactgccccgccccctgagcagaaaccatcattagctaagtctctgctg
gatcgatttgattatgatgatgaccctgaacctgtggaggaaaagactgaaccagcccct
gctgctcccattaccataaacctcccaccagaattacagcaagccctgcaagctcatctt
ctaagccaaattgttaaccagacgcagatgcagggtcagatgatgtcacagggtcaagtg
ccgtcccaggatcagatggcacctcaggagttcccagcgatggttcagacccaaatacca
gataatactcctcaagtctttgatgagagtgtcatacagcccggtacaaaccagcaggct
tcagctgagaatgaacgctcggtgcatgatgggagagatcgaagacacagcaggcggacg
agatcaaggtctccacagagactgtcgtcatcacgctcgggaagatcacggtccggttca
cgttcccgccgagaacggtcgcggtatcaccgcacgcgttctcgatccagagagcggcga
ggccgttccccacaggcgcgatcagaggagaggagagacagggagaaagagcgagagcga
cgacagaaaggacttccgcccatcaagaaagaaactctcagtgtgtgcagtactacatta
tggatcggacagctggacaaaaagactcagcagcaggacatcatgagtctgatggaggag
tttgggcagatcgagtccatcaacatgattcctcccagaggttgtgcctacattgtcatg
gtgcacagacaagatgcctacacagccctgaataaactcagcagaggggttgttaaagtc
aaccagaaaaccattaagatcgcatgggcgttgaataagggcataaagacggacttgaag
aagttttgggatgtggagcggggtgtcacgtatatcccatgggataaagtgaaagccgat
gatattcgaagtcttcaagaaggaggcttgcttgacgctgaaacactcaaaccagagtgg
aaaagtgttatggccaatccggctgtgccagtaacagaaggacctgaaggaaaacaggaa
gagggagctgcactaccagcggtatcacagagccactcagttcaacctgttgctgcaatg
aatgtcgtcccaggaccccctcttaacatgagacttccacctccagccatgatcacaggg
gcttcccctccatcattcgctcctcttggatttaaccccccacagatgtctgcaggattt
gctcctgccgtcccggtggcctctctgaaccccgcaggtcctcctccatccgtcacagaa
accctaatcgaagaaccttcggatgaatcccacgaggacctgacaggagctcaagcactc
agttcgcctcctattggggggattctggggcccagaccggggcccctaccgccacacgcc
cctgtgggactccgcccacccttcatgccccctttcgctaataacgggccccgtcccatc
ctgccccctcccaatatgccccctcaaatgatgccccctaggggccccaaccccatgttc
ggagaaccccctgtgggccgattccggatgcgcatgatgggtcctccaagacacgatttc
ccccgtcacaggctcccagtgcatcctagaggagaggaaccgcactggcgagatcaaggt
cctgaaaggggcccggacagatttggaaacgagccaccgtttcatcggggtggatgggga
aggggcggccctcgcggacgaagtcggtttgggaactga
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integrated database retrieval system
