Cyprinus carpio (common carp): 109103320
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Entry
109103320 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109103320
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109103320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
109103320
NCBI-ProteinID:
XP_042627481
UniProt:
A0A9Q9YW41
LinkDB
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Position
A15:21781670..21790077
Genome browser
AA seq
494 aa
AA seq
DB search
MAPTVQTQAQREDGHRSSAHRSVPERSGVVCRVKYGNSLPDIPFDPKFITYPFDQHRFVQ
YKATSLEKQHKHELLTEPDLGVTIDLINPDTYRIDPSILLDPADEKLLEEEIQAPSSSKR
SQQHAKXVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAIE
KTFEDAQKSIAQHYSKPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDVSAPAGVDM
MSQAMIRGMMDEEGNQFVAYFLPNEDTMRKRKRDVEEDLEYMPDELYDYKIAREYNWNVK
NKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKVGAQSSTNAVLVCKHRDMNEKE
LEAQEARKAQLENHEPEDEEEELDLEKDLQDSGEEREKASDSDNSESESEREDEERPADE
DEEEEDEESGKRRERKSSGSESGEDRQARDEEEIFGSDDDSEEDEGERARSNSSSVQHSG
SERASDSSDASDSE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcctactgtacagacgcaagcgcagcgggaggatggacaccggagttcagctcac
agaagcgtcccagagaggtctggtgtcgtgtgcagagtgaagtatggaaacagtcttcca
gatatccccttcgatcccaagttcatcacctatcccttcgaccagcacaggtttgttcag
tataaagccacgtctctggagaaacagcacaagcacgagctgctcactgaaccggatctg
ggcgtcaccatcgacctcatcaaccctgacacgtaccgcatcgaccccagcattctgctg
gatcctgctgacgagaagctgctggaggaggagattcaggctccgtccagctcaaagagg
tcccagcagcacgcgaagntggtgccgtggatgaggaagaccgagtacatctccaccgag
ttcaacagatacggcgtctccaacgagaaggtggaagtcaagatcggtgtgtccgtgaag
cagcagttcacagaggaggagatctacaaagaccgagacagtcagatcgcagccatcgag
aagacatttgaagatgcacagaaatccattgcccagcactacagcaaacccagagtcacg
ccggtggaggttctgcccgtcttcccagacttcaagatgtggattaatccgtgtgctcaa
gtcatctttgattctgacccggcacctaaagatgtttctgctccggcgggggtggacatg
atgtcacaggccatgatcaggggcatgatggacgaggaggggaatcagtttgtggcgtac
ttcctgcccaacgaggacacgatgcgcaaacgcaagagagatgtggaggaggatctggag
tacatgccggatgaactgtatgattataagatcgctcgcgagtacaactggaacgtgaag
aacaaggccagtaaaggatacgaggagaactacttcttcatcttcagagacggagacgga
gtttattataatgagctggagaccagggtgcgtctgagcaagcggcgggcgaaggtcggc
gctcagtcgtctacgaacgctgtgctggtgtgtaaacacagagacatgaacgagaaggag
ctggaggctcaggaggctcgcaaggctcagctggagaatcacgagcccgaggatgaagag
gaggagctggacttggagaaagacctgcaggactctggcgaggagcgcgagaaggccagc
gactcggacaactctgagagcgagtctgagcgcgaggatgaggagcggcccgccgatgaa
gacgaggaggaggaggacgaggagagcggtaagaggcgcgagaggaagagcagcggcagc
gagagcggcgaggaccggcaggcgcgtgacgaggaggagatcttcggcagcgatgacgac
agcgaggaggacgagggagagcgggcgaggagcaacagcagcagcgtccagcacagcggc
agcgagagagcgtccgactccagcgacgccagcgacagcgaatga
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