Cyprinus carpio (common carp): 109103499
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Entry
109103499 CDS
T05134
Symbol
cacna1sa
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, a
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04020
Calcium signaling pathway
ccar04260
Cardiac muscle contraction
ccar04261
Adrenergic signaling in cardiomyocytes
ccar04270
Vascular smooth muscle contraction
ccar04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109103499 (cacna1sa)
04020 Calcium signaling pathway
109103499 (cacna1sa)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109103499 (cacna1sa)
09153 Circulatory system
04260 Cardiac muscle contraction
109103499 (cacna1sa)
04261 Adrenergic signaling in cardiomyocytes
109103499 (cacna1sa)
04270 Vascular smooth muscle contraction
109103499 (cacna1sa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109103499 (cacna1sa)
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109103499 (cacna1sa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
109103499
NCBI-ProteinID:
XP_042605042
Ensembl:
ENSCCRG00000021435
UniProt:
A0A9Q9XND4
LinkDB
All DBs
Position
B22:complement(4069715..4094851)
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AA seq
1784 aa
AA seq
DB search
MEGGGEAPMSTFIMDEETLKRKQREKLKKLQATGGNPRPARSLLFLTLKNPFRKACINIV
EWKPFEIIILLTIFANCVALAVFMPMPEEDTNNTNNSQESLEYIFLIIFTMECFLKIVAY
GLLFHADAYLRNCWNILDFVIVTMGLFTVVVDFINNISGVEAPVEQKGGFDMKALRAFRV
LRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCYHV
GTDIIATGDDAQAAPCAQAGNGRRCTLNGTECRGGWPGPNNGITHFDNLGFSMLTVYQCI
TTQGWTDVLYWVNDAIGMEWPWLYFVTLILLGSFFILNLVLGVLCGEFTKEREKSSRSGE
YQKLRERQQFDEDLKGYMEWITQAEVMDNDQEGQGLLPLQDGSDTETLYELDALNKLMYY
VRHARRWNRFFRRKCRAWVKSRLFHWLVILLVFFNTLAIATEHHGQPESLTNFQDNTNKV
LLSLFAVEMFMKMYAMGLPSYFMSLFNRFDCFVVSVGILEIILVRMDVMSVMGISILRCI
RLLRLFKVTRYWTSLNNLVASLLNSVRSIASLLLLLFLFIVIFALLGMQVFGGKFNFPDE
NVRRSNFDNFPQALITVFQILTGEGWNYVMYDGILAHGGPAMPGILVSIYFIILFICGNY
ILLNVFLAIAVDNLAEAESLTSAQKEKAEEKKRKRLLRENLPDKAEEEKAMLAKKLAEQR
AKIDGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPLSPRPRPMADLQLKE
TVVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPMSFR
NQVLAYADYVFTSVFTAEIVLKMTTYGAFLHKGSFCRNSFNILDLIVVGVSLLSMGMESS
AISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIGVQ
LFKGKFFFCTDPLKMTAEECRGMFIQHQEHALHDMVLGHRTWMNSDLNFDSVLNGMLALF
TVSTFEGWPDLLYKAIDSNLENVGPIYNNRIEISIFFIVYLILIAFFMMNIFVGFVIVTF
QEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPHQYQVWYIVTSCYFEYLMFLLI
MLNTMCLGMQHCNQSDHITHLSDMLNVIFTVLFTVEMILKLGAFKAKGYFGDPWNVFDFI
IVVGSIVDVILSEIDAALAAQGGLYCLTGCSEVNPMQAIADSENMSVSITLFRLFRVMRL
VKLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALLDGTVINRN
NNFQTFPQAVLLLFRCATGEGWQEIMLGCLYGQRCDPKSEYLPGEEYTCGSGFAILYFMS
FYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLDVV
TLLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTEGNF
EQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDHFRKFMKRQEEY
YGYRPNKKNKNTTEIQAGLRSIEEEAAPELQRAISGDLLNDEEMDRAMDESGEEGIYRRA
GGLFGNHVDRFAMERGTPMATQVTSQRPLQITDSRAEETEATAAYAHYHANTNTNNNTNT
NNNTSRQRGESHFPSCISASRQYGPVSAAEFLIQEALTAGGLESLASDWHFVSVTKAEMA
EALHMDLAALERKSAAALNKRKGQCVFRKRKTPVSRPDNTHCQV
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggtggtgaagcacccatgagcaccttcatcatggatgaggagacgctcaag
aggaagcagagagagaaactcaagaagctccaggccacaggtggaaacccgcggccggcg
cgatccctcctcttcctcacgctgaagaaccccttccgcaaggcctgcataaacattgta
gagtggaaaccgtttgagatcatcatcctcctcaccatctttgcaaactgtgtagctctg
gccgttttcatgcccatgcctgaggaagatacgaataacaccaacaattcacaggagagt
ctcgagtacatttttctcatcatattcactatggaatgtttcctgaagatcgtagcatac
gggcttctctttcatgccgatgcttatttgcggaactgctggaatatattagattttgtc
attgtgacaatggggttgttcactgtcgtggtggacttcatcaataacatcagcggcgtg
gaggcgccggtggaacagaaaggcgggtttgacatgaaagccctccgagcgtttagagtc
ctgcggcccctgaggctcgtctctggggtccccagcctgcaggtggtgatgagctccatt
ctcaaatccatgctgcctctgttccacatctctctgctggtcttcttcatggtcaccatc
tacgccatcataggcctggagcttttcaaatgcaaaatgcataaaacatgttaccatgtt
ggcacagatatcatcgccacaggggatgatgcacaggcggctccatgcgctcaggccggt
aatggaaggcgctgcactctaaatggaaccgaatgtcggggtggttggcccgggccaaat
aatggcattacccactttgacaatctgggattttccatgctcacggtataccagtgcatc
accactcagggctggacggatgttctgtactgggtaaatgacgcaattggaatggagtgg
ccctggctgtattttgtgactctgatcctcttgggctcgttcttcatcttgaatctggtt
ctgggggttctgtgtggtgagttcactaaggagagagagaagagttctcgaagcggagag
tatcagaaactgagggagcgtcagcagtttgatgaggatctgaagggatacatggagtgg
atcacacaggcagaggtcatggacaatgaccaggaggggcaaggtctgcttccactacag
gatggatccgacacagaaaccctctatgagcttgatgcactcaacaaactcatgtattat
gttcgacatgctcgtcgctggaaccgtttttttaggaggaaatgtcgtgcatgggttaag
tccaggttgttccattggctagtgattttgttggtgttcttcaacactctggcaattgca
acagagcaccacggtcagcccgagtctctcaccaacttccaagacaataccaataaggtg
ctgttgtctctgtttgcggtggagatgtttatgaagatgtacgcgatgggcctgccgtca
tacttcatgtccctctttaaccgttttgactgctttgtggtgtctgtgggaatccttgag
atcattctcgtacgcatggatgttatgtccgtcatggggatctccatactgcgttgcatt
cggctgctgcgcctctttaaagtaacccggtactggacatcactgaacaatcttgtggcg
tcgctcttgaactctgtgcgatccatcgcctcgctcctgctgctcctcttcctcttcatc
gtcatcttcgccctgcttggtatgcaggtttttggagggaagtttaattttccagatgag
aatgtgagacgaagcaactttgacaattttcctcaggctctgatcacggttttccagatc
ctcacaggtgaaggctggaactacgtcatgtatgatggcatcttggctcacggaggtcct
gccatgcctggaatcctggtcagcatttacttcattatcttgttcatctgtggaaactat
atcctcttgaacgtcttcctggcaattgcggtggataacttagcagaggcagagagtctg
acctccgcccagaaagagaaggcagaggagaagaagcggaagagacttcttagagaaaac
ctacctgataaggcagaggaagaaaaggccatgctggcaaagaaactagccgagcagaga
gccaagattgatggaattcccaccacagccaagctcaaagtggacgaatttgaatcaaat
gtgaacgagattaaagatccatttcctccagctgattttccaggtgacgatgaggaggag
gagccagagatccccctcagtcctcggcctcgtccaatggcagacctgcagctcaaggag
acagtggtacccatgccagaggccagttccttcttcatcttcggcccacagaacaagttc
cgtaaactctgccatcgcatcatcaatgctacaaccttcaccaacatcatcctcctcttc
atcctgcttagcagtatctcactggctgcagaggaccccatcgaccccatgtccttcagg
aaccaggtcctggcctacgctgattatgtcttcacttcagtttttaccgcagagattgtg
ctgaagatgaccacgtatggtgccttcttacacaaggggtctttctgccgtaattctttc
aacatcttggacctgattgttgtcggtgtctccctgctgtccatgggaatggaatcaagt
gccatctcggtggtaaaaatcctcagggtcttgagggtgttgagacctttaagagccata
aaccgagctaaaggtctcaaacatgtggtccagtgtgtgtttgtggccatcaagaccatc
ggcaacatcgttttagtcacgatgctcttggatttcatgtttgcctgcattggtgttcag
ctttttaaggggaaattttttttctgcacagacccgctcaaaatgacggcggaagaatgc
cggggaatgtttatacaacaccaggaacatgctcttcacgacatggtgctcggtcaccgt
acatggatgaacagcgacttaaactttgacagcgttttgaacggcatgctggctctcttc
accgtgtcaacattcgaaggctggccagacttgctgtataaagccatcgactcgaatttg
gaaaatgttggcccaatttacaacaaccgcattgagatttccatcttcttcattgtttac
ctcatcctcatcgccttcttcatgatgaacatctttgtgggcttcgttatcgtcaccttc
caagaacagggagagcaggagtacaaaaactgcgagctggacaaaaaccagcgtcagtgt
gtccagtatgcactgaaagcccgacctctgagatgctacatccctaaaaacccgcatcag
taccaggtgtggtacatcgtcacgtcttgttacttcgagtacctgatgtttctcctcatc
atgctcaacaccatgtgtctggggatgcagcactgtaatcaatcagatcacatcacccat
ctttcagacatgctgaacgtcatcttcactgtactgtttacagtggaaatgatcctcaaa
cttggagccttcaaagcaaagggttacttcggggacccttggaacgtctttgatttcata
attgtggtgggcagtattgttgacgtcatactgagtgaaattgatgcggctcttgctgct
cagggtggactgtattgtctcactggctgttctgaagtgaatccaatgcaagccatagca
gactctgagaatatgagcgtgtcaatcacactcttccggcttttccgtgtcatgcgtctg
gtgaaactgctcaaccgttttgagggcattcgcaacctgctgtggaccttcatcaaatca
ttccaggctttgccatatgtggctctcctcattgttatgctgttctttatctacgctgtc
atcggcatgcaggtgtttggcaaaatcgcactattagatggtaccgtgatcaaccgtaac
aacaacttccagacatttcctcaagctgttctactgctgttcaggtgtgccacaggggag
gggtggcaggagatcatgttgggctgtttgtacggtcaacgctgtgaccccaagtcagaa
tacctacctggagaggagtacacctgcggttctggattcgctattctctacttcatgagt
ttttacatgctctgtgcttttcttatcattaatttgtttgttgctgtgatcatggacaac
tttgactatctgacccgtgattggtcgatactcgggccgcatcatttagacgagttcaag
aagatctgggctgaatatgaccctgaggcaacggggcgcattaaacacctggatgtcgtg
acgctgctgcggagaatccagccaccgcttgggttcggaaagttttgcccccatcgtgtt
gcctgcaagagattgatttccatgaacatgcctctgaacagtgatggaaccgtgacgttc
aatgccacgctgttcgctctggtcagaactgcattgaaaattaaaaccgaaggtaatttt
gagcaggccaatgaagagctgcgtgccattattaagaagatctggaaacgcaccagtatg
aaactgctcgaccaggtcatcccaccaatcggagacgatgaggtaacagtggggaagttt
tacgccacgttcctgatccaggaccacttcaggaagttcatgaagcgccaggaggaatat
tacggataccggcccaacaagaaaaacaagaacaccacggagatacaggcgggtctgagg
agcatcgaggaggaggccgcgcctgagcttcagcgggccatttctggagatctcctgaat
gacgaggagatggaccgagccatggacgaatccggagaggaggggatctacaggcgagca
ggaggcctgtttggaaaccatgtggatcggtttgcgatggagaggggaaccccgatggcc
acccaagtgaccagccagcgccccctacagatcacagacagcagagcggaggagacggag
gccacggccgcatacgctcattaccacgccaacaccaacaccaacaataacaccaacacc
aataataacaccagcagacagagaggtgaaagccatttcccatcatgcatcagtgcatcc
agacagtacggtccagtgagtgcagctgagttcctcatccaggaggctctgaccgccgga
ggtttggagagtctggccagcgactggcatttcgtgtccgtgacaaaggcagagatggcc
gaggcccttcacatggatctggccgcactggagaggaaatcagcagccgctcttaataaa
cgtaaaggacagtgtgtgttcaggaagaggaagacgcctgtgtctcgtccagataataca
cactgccaggtgtaa
DBGET
integrated database retrieval system
