Cyprinus carpio (common carp): 109103567
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Entry
109103567 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04382
Cornified envelope formation
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109103567
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109103567
09142 Cell motility
04820 Cytoskeleton in muscle cells
109103567
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109103567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109103567
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109103567
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109103567
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109103567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Cry1Ac_D5
Motif
Other DBs
NCBI-GeneID:
109103567
NCBI-ProteinID:
XP_042619300
Ensembl:
ENSCCRG00000031714
UniProt:
A0A9R0B2L6
LinkDB
All DBs
Position
A9:7704044..7751102
Genome browser
AA seq
1639 aa
AA seq
DB search
MRLPCVTVFLLTVFLSIDEGTAKGGCSGSSCGGCDCSGVKGAKGEVGLPGLMGLVGFPGM
PGPEGPSGSMGIKGDTGEPGAPGLKGNRGPPGVAGFPGHPGIPGLPGLEGAPGPQGIPGC
NGTKGERGFDGIPGVPGVQGPPGFPGLKGVKGDPGGIIGVPIPQKGDRGLPGQPGSQGQK
GYPGQQGPLGPPGPTGPPGRPGEPGQKGEPGDKLTFVGEKGQKGESGLSGPPGPPGRPEE
REVSETVYQPGPQGEKGSSGEKGEKGFCATHQHGIKGEPGPPGPIGKPGKDGQNGEKGDR
GLSGTPGFDGLKGDKGERGPPGYGGGRPGPPGPPGPAGAEGETGYPGERGGPGPPGRYIP
GPPGSPGNPGEIGQKGDKGADGLSLKGSSGADGQPGPPGPPGPINEKCNVIKGDQGPAGP
PGLQGEIGQKGDQGQTCTECTVFGPPGLPGPPGPKGQQGFPGIVGSKGEKGVTGPPGSIG
IPGKEGSPGLMGAPGAHGEPGDIFVAPGLKGDKGLPGTTGDRGLPGVDGLPGKDGRSGQP
GPKGEPARFGIKGDRGLDGDQGLPGFPGERGPPGFPGIGRPGESGEKGSAGLPGAPGRPG
LPGAKGEAGKTESLPGPQGAPGPRGETGRPGLQGDTGYPGERGIPGFPGDKGDPGLPGTG
IPGPPGPKGYSGIPGPTGIPGEPGRPGQDGLPGRAGTSGQKGEPGRGLPGPKGAIGHPGL
TGHPGEKGIPGMPGVPGTEGLTGPPGIQGIRGNPGPPGVRGAVGPPGPPGPGEPGPPGPM
GPPGSPGPFGRIGIKGEKGYQGLPGLDMPGPPGDRGSPGVPGLPGSKGLPGQHGPPGRDG
FPGERGPKGEIGIMGMTGQPGHLGPGGKPGEPGQKGDPGLIGIRGEFGDPGIKGERGEPG
LQGPPGNMSEIKMDNWKGDKGDSGERGDPGPTGEKGFPGTPGDPGMPGKEGMPGSHGLPG
EKGNTGVPGEQGRTGEPGKPGGRGDMGYPGSMGPKGIQGLSGSPGHPGFKGADGPKGDKG
DPGAAGIGIPGPPGVKGNVGPPGFPGEPGHKGQKGTMGIPGTPGIQGHKGDTGLIGYPGS
PGIPGEKGVSGLPGSPGEPGFQGRPGEPGLQGPPGVPGEKGKPGVDGIPGYNGERGEPGI
PGIGLTGASGEPGSKGQKRQPGLPGIPGSPGVPGTKGEKGLPGFQGSQGWPGERGLPGAS
MEGPKGDRGAQGQPGEKGASGYPGPPGTPGSAGAKGEKGDVGFPGPQGSQGYKGDKGFTG
ASGEPGLPGYNGPKGEMGPQGVPGFPGIKGERGVNGSKGDGGDRGFPGLKGSEGPPGPPG
PHTFIKGDPGLPGPQGPSGLVGIQGIPGEKGQQGVMGTQGIKGYDGTPCYNGHPGAKGEP
GQTGPSGPRGYPGPPGPSGIPGRIGPPGPSSMDHGFLVTRHSQTVDVPLCPEGTTPIYDG
YSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNLCNFASRNDYSYWLTSPEPMP
MNMAPVTGQSIKPFISRCVVCEASAMVIAVHSQTIQIPPCPHGWDSLWIGYSFVMHTSAG
AEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEENGMFKKPVPTKL
KAGNLRTHISRCQVCMKRV
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttccatgcgtcaccgtttttcttctcacggtctttttgagcatagacgagggt
acagctaagggtggatgctcggggtcatcatgtggtggatgtgactgcagtggtgttaaa
ggggcgaagggtgaggttgggctccctggtttgatgggccttgtaggatttcctggaatg
ccagggcctgagggcccctcagggtcaatgggaataaagggagatacaggggagccagga
gctccaggacttaaaggaaacagaggcccaccaggtgtggctggtttcccaggacatcca
ggtattcctggtcttccaggtctagaaggtgcaccaggacctcaaggaatcccaggctgc
aatggaacaaagggggagcgtggttttgatggaattccaggtgttccaggagtgcaggga
ccaccgggttttccaggtttgaagggagtaaagggagatccaggtggtattattggagta
cccatccctcaaaaaggagacaggggcttgccaggacaacccggttcacaaggacaaaaa
ggatatcctggacaacaagggccattaggcccacctggaccaacaggacctcctggaagg
cctggtgaacctggacaaaaaggagagccgggtgacaagctgacatttgttggtgagaaa
ggacagaagggagaaagtggtttatccggtccccctggtccaccagggagaccagaggaa
cgagaagtctctgagacagtttatcaacctggaccacagggtgaaaaaggctctagcgga
gagaaaggagaaaagggtttttgtgcaacacatcaacatggaatcaaaggtgaaccagga
ccaccaggaccaatcgggaaaccagggaaagatggacagaatggagaaaagggggatcgg
ggcttatctggtactcctggctttgatggccttaagggggacaaaggagaaagaggacca
ccaggatatggtggtggtcgtcctggccctcctggtcctcctggccccgctggagcggaa
ggagagacaggttatccaggagagcgcggaggtcctggaccccctggcaggtatattcct
ggtcctcctggatctcctggtaaccctggagagattggccagaagggagataaaggagct
gatggactgtctcttaaaggttcaagtggagctgatgggcaacctggcccccctggaccg
ccaggaccgatcaatgaaaaatgtaatgttataaaaggagatcaaggccctgctggacct
cctgggttgcaaggagagataggacagaaaggtgatcaaggtcaaacatgcacagagtgc
actgtttttgggccaccaggtttgcctggtcctccaggaccaaagggtcagcaaggtttt
cctggaattgtggggagtaaaggagagaagggtgtgacaggacctcctgggtctattgga
attcctggtaaagaagggtctccgggtttaatgggtgcccctggcgctcacggtgagcct
ggtgatatctttgtggctccagggctgaaaggagataagggtttacctggtactactgga
gacagaggattacctggtgttgatgggctcccaggaaaagatggtcggtcaggtcaacct
ggacccaagggagagcctgctagatttggtattaagggtgatcgtggcctggatggagat
caaggtctacccggctttccgggtgagagaggtcccccaggttttccaggcataggtcgg
ccaggtgaatctggtgaaaaaggctcagcaggtttgcctggtgcaccaggaaggccagga
ttaccaggagctaaaggtgaagctggcaaaactgaaagtttacctggacctcagggagcc
ccaggacctcgtggagagactggcagacctggtcttcaaggtgacacaggttatccaggt
gaacgtggaattccaggattcccaggagacaaaggtgaccctggactgccaggaactggc
attcctgggcccccagggccaaaaggatactctgggattccaggtcccactgggattcca
ggagagcctggtcgaccaggccaggatggcttgcctggtcgtgcagggacatctggtcaa
aaaggtgaacctggcaggggtcttcctggtcctaaaggtgccataggtcatccaggattg
acaggacatccaggggagaagggtattcctggaatgccaggggttcctggaactgaggga
cttactgggccacctggaatacagggaatcagaggtaaccctggaccacctggagttcgt
ggtgcggtggggccgccaggtcctccagggcctggagaacctggaccacctggaccaatg
gggccacctggaagccctggaccctttggtcggataggtataaagggtgagaaaggttat
caaggcctacctggtttagacatgcctggccctccaggagacaggggcagccctggtgtc
ccaggtctaccaggatctaagggtttgccaggacaacatggacctccaggaagagatggc
ttccctggtgaacgtggtccaaaaggagaaattggaatcatgggaatgacaggacaacct
ggacatttaggtcctggtgggaaacctggagaacctggacaaaaaggtgatcccggtttg
attgggatcaggggagagtttggtgatccaggtatcaagggtgagagaggagaaccgggt
ctacaggggccacctggaaacatgagtgagattaaaatggataactggaaaggggacaaa
ggagacagtggagagagaggtgatcctggtcctactggagaaaaggggtttcctggaaca
cctggagaccctggaatgccaggaaaagagggaatgccaggttcacatggactgccaggt
gagaaaggaaacactggagtccctggggagcaaggacgaacaggagaacctggaaagcca
ggtggaagaggagacatgggatacccaggttcaatggggccaaaaggtattcaaggtctt
agtgggtcaccgggtcaccctggatttaagggtgctgatggccccaaaggagataaagga
gatcctggtgcagcaggaataggaatccccggtccccctggagtgaagggaaatgttggc
ccccctggtttccctggtgaacctggacataagggacagaagggtacaatgggcatccca
ggaactcctggaattcaaggacataaaggagacacaggattgattggttacccaggcagt
ccagggataccaggtgagaaaggtgtcagcgggttgccggggtctccaggggaacctggg
tttcaaggacgtccaggtgagcctggtctacagggtccaccaggtgtgcctggggagaaa
ggcaaaccaggggtagatggcattcctggatacaatggagagagaggagaacccggtata
cctggtataggattgacaggagcaagcggagaacctggcagcaaaggtcagaaaaggcaa
cccggtcttcctggcattcccgggagtccaggtgttcctggaaccaaaggtgagaaaggt
ctgccaggattccaagggagccaaggatggcctggagagagaggacttccaggagcatcc
atggagggacctaaaggggacaggggggctcagggacagccgggagaaaaaggtgcgagt
ggttatccaggcccacctggcacaccaggcagtgctggagctaaaggagaaaagggagat
gtgggcttccctggcccacaaggctctcaagggtataaaggagacaaaggtttcactggt
gcttctggtgagcctggattgcctggttataatggacccaagggtgagatgggaccacag
ggtgttcctggtttccctggtataaagggtgagagaggagtgaacggttctaagggtgat
ggaggtgacagaggatttccaggtcttaaaggaagcgaaggcccccctggaccccctggg
ccacatacatttataaagggagatcctggtcttccaggacctcagggtccttcaggtcta
gttggaatccaaggcatccccggagagaaaggacaacagggtgtgatgggaactcagggt
ataaaaggatatgatgggacaccttgctataatggacatcctggggccaaaggagagcct
ggacaaactggaccctctggccccagagggtaccctggacctccagggcctagtggtatc
ccaggtcgcatcggccctccaggcccttcctccatggaccacggcttccttgtaacccgc
cacagtcagactgttgatgttccactatgtccagagggaacaacgccaatctatgatgga
tattcgctgctttatgtccagggcaatgagaggtcacatggacaagacctaggtacagct
ggtagctgcctaaggaagttcagcccaatgcctttcctcttctgcaacatcaacaatttg
tgtaacttcgcttctcgtaatgactattcctactggctcacgtctcccgagcccatgcct
atgaacatggcccctgttaccggtcagagcatcaaacccttcatcagcagatgtgtagtt
tgtgaggcttctgctatggtgatagctgtgcacagtcagaccatccagatcccaccttgc
cctcatggttgggattctctctggatcggatactctttcgtcatgcacaccagtgctggt
gctgagggctccggtcaggctctggcctctccgggttcttgtctggaagagttccgctcg
gctcccttcatcgagtgtcacggtcgtggcacctgcaactactatgctaactcctacagc
ttctggttagccaccatagaggaaaacggaatgttcaagaaacctgtccctacaaagcta
aaggctgggaatctacgaactcacatcagcaggtgtcaagtgtgcatgaagagggtatag
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integrated database retrieval system
