Cyprinus carpio (common carp): 109103773
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Entry
109103773 CDS
T05134
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04140
Autophagy - animal
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109103773
04137 Mitophagy - animal
109103773
04148 Efferocytosis
109103773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109103773
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109103773
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
109103773
NCBI-ProteinID:
XP_042627166
Ensembl:
ENSCCRG00000021725
UniProt:
A0A8C1P8E3
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All DBs
Position
A15:complement(16243533..16256735)
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AA seq
635 aa
AA seq
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MVNSVMKRPSLEQRKVRSRDAARSRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVTL
SYLRMNRLIQSAGPAKTQTEETENPTDAFYQQALAGFILVMTEEGDLVFLSESVSKYIGM
TQLELLGQSVYEFVHPCDQEELRDILTTRPGVSKKKTEKLTEHNFFLRMKSTLTHTGRTV
NIKSANWKVLHCTGHMQTFSGDDENSPPAGSFLILLCEPIPHPSSVEFPLDSSTFLTRHN
MDLTFTQCDGRVTELVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRF
LAKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCEKPKPRAEK
LSMLEKEEEEEKDSDMEEESDTATLFLQMKDNPEELMQLAPHSGDTIISLKECVELSFCS
PPSPNTLPESPQDLCTPELRQLLSPIFDRPTNSPPAASPAEELPMETEGVEKFFALKPEE
SITLKGQSEAMDELDLDMLAPYISMDDDFQLTFLPQSEMAVPSDMLTNTSRKRCLEDEEE
DDIPVLAAKWEKKTKSGSIEEELLLSHTLLNTLSEDGSEEFEPPPQKRSQLLTDRDPLLG
GAQALCDTAALMRDSFLSRPPDLMRPAAAAMPSLT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactccgtgatgaagaggcccagtttggagcagcggaaggtgcgttcacgtgat
gcagcgcgcagtaggagaagtcaggagactgaggtgttttacgaactggcccactcacta
ccccttccacgacggatcgcctcccacctggacaaagctgccatcatgagggtgacactc
agctatctgcgcatgaaccgattgatccaatcagcagggccagccaaaacacagactgaa
gaaactgagaatcccactgatgccttttatcagcaggcactggcaggctttattctggtg
atgactgaggaaggggacttggtcttcctctcagagagtgtcagcaaatacatcggcatg
acacagctggagctgcttggacagagtgtgtatgagtttgttcatccctgtgaccaagaa
gaattgcgagacatcctcaccacaagacctggtgtttcaaagaaaaagacagagaagttg
accgaacataattttttccttcggatgaagagcacactcacccacacaggaagaacagtt
aatatcaagtctgcaaactggaaggtccttcattgcacaggacacatgcagacgttcagt
ggcgatgatgagaactcgccccctgctggcagcttcctgattttgctttgtgaacccatt
cctcacccctccagcgttgaatttccactagacagcagcaccttcctcacacgccataac
atggacctgactttcacacaatgtgacggacgagtcactgagcttgttggatatcaaccc
gatgatctgattggccggtctgcctatgagttttatcacgcccttgattttgatcatgtg
accaggagtttacacatcttgttctccaagggccaggtgtgcaccagccattaccgcttc
ctggctaagaatggaggatttgtctggactgagactcaagccactgtcctctacaacagc
aggacctctcaacccgaggctgtggtctgcctcaactttatcctcagtggtgtggaagag
gcagatgttgtgttctcactggaacagacctgtgagaaaccaaagcccagagctgagaag
ctgagcatgctggagaaggaggaggaggaggagaaggactcagacatggaggaggagagc
gacactgcgacgctcttcctccagatgaaggacaacccagaagagttaatgcagctggca
cctcactctggagacactatcatttccctaaaagagtgtgtggagttgtcattctgcagt
ccacctagtcccaacactcttccagaaagccctcaggacctctgtacgcctgaactccgc
cagctcctttctccaatattcgacaggcccaccaattctccacctgctgcgagccccgct
gaagagctgcccatggagacggaaggggtggagaagttcttcgccctcaaacccgaggag
agcataactctgaaaggacagtcagaggctatggatgagcttgatctggacatgttggct
ccatatatctccatggatgatgacttccagttgaccttcctgccccagagtgaaatggct
gtgccttcagatatgctgaccaacacttcaaggaaacgatgtttggaagatgaggaggaa
gatgatattcctgttctggctgccaaatgggagaagaaaacaaagagcggctccatagag
gaagagcttttgctcagccacacattactgaataccttgtccgaagatggttcagaagaa
tttgaaccaccacctcaaaagcgaagtcagctcttgaccgacagggacccgttgctgggt
ggagcgcaggccttgtgtgatacagcagctctcatgagggacagcttcctgtcgcgccca
cctgacttaatgaggcctgctgctgcagcaatgccctcccttacttga
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