Cyprinus carpio (common carp): 109103913
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Entry
109103913 CDS
T05134
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04270
Vascular smooth muscle contraction
ccar04625
C-type lectin receptor signaling pathway
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109103913 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109103913 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
109103913 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109103913 (arhgef12a)
Membrane trafficking [BR:
ccar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109103913 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
109103913
NCBI-ProteinID:
XP_018972800
Ensembl:
ENSCCRG00000012344
UniProt:
A0A9Q9VGU5
LinkDB
All DBs
Position
A15:14728604..14782759
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AA seq
1390 aa
AA seq
DB search
MSDTRSPVTDRTGSILSRDPPPDKRPKSDKLPGTPTHEFDPTDVLVQKSGFVVDDRRPES
FGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQS
NHVEVVELIKSGSYVALTVLGQPPGLPQIPLSEVDVGLGSPGGYGDPFVTSPNSYNAAER
TSSRLVSWEENSAPLNQRMDNKRMVSKEPQDIQGLKEDYSRTPTHKPLRDIQEAKKHIPH
QQVQTHESLCLRNSEDGFWVDEDQYKGDFSPEGLWSGSSVSSVQHRFYPASPENQQDSNC
SSPKSTPRDSLNSCTSPDVEDGSDLDSRFSSTIGNPPSRLASEIIAAEDDDFDIEQEQVN
GQCSCFQSIELLKTRPAHLAAFLHHVISQFDPAPLLCYLYADLYKQTNSKETRRIFMDFL
TFFIDRGANLKVAVPESISSELERRRPELIPEELHRQYLKTMQETLLPDVQRNLEDFRQK
RSMGLTLADVELSRLDFQQLAQERERLCAERILSKIDDILLTSQTAEEEKCNSIQYVIFM
YMKHLGVRVKEQRNLESKRVRINFLPSKLRKSKTEKEGEEKLKKPRFPIRVPQRWPSRID
SVPSGRAGDNIKHRPQKQMSQPALGGSELIEGGRLRGSQSSEGSDLLHSPSLITSPPFST
PYSSPSDPSGKDLEFNMSSSAVVPRLSDGLQSGDVLDGIYPPCDDIPYNMDQLEEDGYRL
LDVGTPKLSRRFEELQSEDDQGSDVYSDVDPPNWQQVVRRDVLAGLTPHEIKRQEVINEL
FYTERTHVRMLKVLDSVFYQKLTRENILPPVDIKNIFTNLEEIIQLHMRIADQMTAIRKK
NESSVIDHIGDELLAWFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDQRFTSFMQEA
ESNRLCRRLQLKDIIPAEMQRFTKYPLLMDNIVKYTDESEEKDKVRRAAECCRHILSHVN
QSVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKINKDKT
IELYTLLLEDILVLLQKQDERLILRCHSKNLAGTADTKHIFSPIIKLSTVLVRSVATDNR
SFFVISMSKNGAQIYELMAQTVSEQRMWQRQIAQRADVTNAKPHSIIPLPQHDGDRDSVE
LSKFSKGSEQISTGSIQSTEKDSEISPTAALQDCVSDANPGEEDQVPRAGRDGSYLDSEL
LNGRDTDSVSCSSKADEALKTLAALKQVLVTQLMAQDEGERLGRSAGSRLLRTTSLRTPV
EHSSTRTPSRAQDYTSGDTGFYECPEDYTAYLVLEGYGGPGESSTDDDIQVRRKESSLAH
SCAADSGISLKFSSPSSGSTSRLSRQVLSHLRCLQANLNHLKEMETKYYNLLRQRPVEST
ADTDESRDKK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacggtccccagtcactgacagaaccggtagcattctcagcagagacccc
cctcccgacaagaggcccaaaagcgataagctgcctggtacccctacacacgagtttgat
cctacagacgtgctggtgcagaagagtggatttgtagtggatgacaggagacctgagtct
tttgggctggttcagagatgtgtgatcattcagaaagatgagaacggctttgggctgacc
gtcagtggggacaaccctgttttcgtgcagctcgtcaaacaggatggcgctgccatgcgt
gcaggtgttcagacgggggacaggatcattaaggtgaatgggacattggtgacgcaatcg
aaccatgttgaagtggtggaattaattaaatccggctcatatgtggccctcacagtatta
ggccagcctcccgggttgccccagatccccctctctgaggtagacgtgggtctcgggtca
ccggggggttatggggacccttttgttacatctcccaactcatacaatgcagcggaacgc
acctcctctcgtcttgtgtcatgggaagagaacagtgctccactcaaccaaagaatggac
aacaagaggatggtgtccaaggagccacaggacatacagggactgaaggaggactacagc
agaactcccacacacaaaccactacgggacatccaggaagccaagaagcacattccacat
cagcaggtccaaacacatgagagtctgtgtctcaggaacagtgaagatggcttttgggtg
gatgaggatcaatataagggagatttcagcccagagggtctctggagtggaagttcagtg
tcatctgtccagcaccggttctacccagcctctccagagaaccaacaggactccaactgt
tccagtccaaagagcacccccagagacagcctcaattcctgcacctcccctgatgtcgag
gacggctctgacctggattctcgtttctcatccaccatagggaacccaccctcccgcctg
gcttcagagatcattgctgctgaagatgatgactttgacattgagcaggagcaggtgaac
ggccagtgcagctgcttccagagtatcgagctgctcaagactcgtcccgctcatcttgct
gccttcctgcaccatgtgatctctcagtttgaccctgcacctctgctctgctacctgtac
gctgacctctacaaacaaaccaattccaaagaaacacggcggatattcatggacttcttg
acgttctttatagaccggggggcaaatttgaaagtcgctgtgcctgaatccatctcctct
gagctcgagcggcggagaccagagctgattccagaggaattacacaggcaatatttaaag
acaatgcaggaaactctccttccagatgtacagagaaacttggaggacttcaggcagaag
cgcagtatgggcttgaccctggctgatgtagagctgtctcgtctggactttcaacagctg
gctcaagagagagagagattatgcgctgaaaggatcctatccaagatagatgacatcctg
ttgacttcacaaaccgcagaagaggagaaatgcaactccatacagtatgtgatctttatg
tacatgaagcatctgggagttcgggtgaaagagcaacgaaacctggagtccaaacgagtt
cgaattaattttcttccttccaaactaaggaaaagcaaaacggagaaggaaggggaggag
aagctgaaaaagcctcgctttcccatccgggtgccccagcggtggcccagtcgcatcgat
tcagtaccgtctgggagggccggggacaacatcaagcatcggcctcagaagcagatgtct
cagccagctttgggcgggtcagagctgatagagggtggacgtctgcggggcagtcagtcg
agtgagggctcagacctcctacatagccctagtttgatcacctctccccccttcagcacc
ccttacagttcaccgtcagacccctctggcaaggacctggagtttaatatgagctcgtct
gcggtggttccccggctcagtgatgggctgcaatctggagatgtgctggacggcatctac
ccaccctgtgatgacattccatacaatatggatcagctagaagaagatggatacagactc
cttgatgtgggcacacctaaactgagtagaaggtttgaagagttgcagagtgaggatgat
caggggagtgatgtttactctgatgtagatcctccaaactggcagcaggtggtcaggcgt
gatgttttagcaggcctgacgccccacgagatcaagagacaagaagtcattaatgaacta
ttctacacggagcgaactcatgtacgcatgctgaaggtcctagacagtgtcttctaccag
aaactcacccgagagaacatactgccccctgttgacatcaagaacatattcaccaacctg
gaggaaatcatccagttgcacatgaggatagcagatcaaatgacagcgatacgcaagaag
aacgagtcatcggtcatcgaccacataggagatgagttgctggcttggttcagtggtgga
gaggaggagaagatcaagcaagcagtgggcactttctgcagtaaccagcccttcgccctg
gagctcatcaaatcccggcagaagaaggaccagcgtttcacctccttcatgcaggaggct
gaaagcaatcgactgtgtcgacgattacagctgaaggacatcatccctgcagagatgcag
aggttcacaaagtaccccttactgatggacaacattgtcaagtacacagatgagtcagag
gagaaagacaaagtgagacgagcagccgaatgctgtcgacacattctcagccacgtcaac
cagtccgtgaaggagtcagagaacaaacagagactggaggactaccagagacggctggac
ctctcttcccttaagcagagcgagaaccccatgatctcggagttcaagaacctggatctc
actaaaaggaagatggtccatgagggtcctctgtcctggaagattaacaaagacaaaact
attgagctgtatactttactcctggaagacatcctggtgttgctgcagaagcaggacgag
cgtttaattctcaggtgtcacagcaagaacctcgcaggaacggctgacacaaaacacata
ttcagtcccatcatcaaactcagcactgtgctggtgcgctcggtggcgacggataacaga
tcattctttgtgatctccatgtccaaaaacggagctcagatttatgagctgatggcccaa
acagtgtctgagcagagaatgtggcaacggcagattgctcaaagggcagatgttacgaac
gccaaaccccacagcatcattcctttgcctcagcacgatggtgacagagacagtgtagag
ttaagcaagttcagcaaaggctctgaacagatctccacaggaagcatccagtccacagag
aaagacagtgaaatttcgcccacggcagccctgcaggattgtgtctctgatgccaaccct
ggggaagaggaccaggtccctagagctggcagggatggctcgtatctggactctgagctc
ttgaacggcagggacacagactctgtatcctgctcgtctaaagcagatgaggcccttaaa
accctggcggcgctgaagcaggtgctggtgactcagctgatggctcaggatgagggcgag
cgattgggcagatcggctggcagtcgtctcctcaggaccacctctctacgcacaccggtg
gagcacagctccacgcgcaccccaagtcgagctcaggactacacctctggagatacgggc
ttctacgagtgcccagaggactacacagcttacctggttctggaggggtacggtggccca
ggcgagagcagtacagatgacgatattcaggtccggagaaaggagtcgagtttggcccac
agctgtgctgctgactcaggcatcagcctcaagttctcctcgccctcctcaggcagcacg
tctcgcctcagcagacaggtcctctcacatctacgctgcctgcaggccaacctcaaccac
ctcaaggaaatggaaacgaagtattataatctacttcgccaaaggcctgttgagtcaaca
gcagatacggacgagagcagagataagaaatag
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integrated database retrieval system
