Cyprinus carpio (common carp): 109104097
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Entry
109104097 CDS
T05134
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03440
Homologous recombination
ccar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109104097 (brca2)
03460 Fanconi anemia pathway
109104097 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109104097 (brca2)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109104097 (brca2)
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109104097 (brca2)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109104097 (brca2)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109104097 (brca2)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109104097 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
109104097 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
109104097
NCBI-ProteinID:
XP_042627320
UniProt:
A0A9Q9YX04
LinkDB
All DBs
Position
A15:19190151..19206557
Genome browser
AA seq
2909 aa
AA seq
DB search
MFDNFFNQIDKELGPLNPDWFEELTAKAFRDEGRPKSSKVEEEETVKVSATSALASHSTP
KIFKQPHFQSPASILNEESPYEVVNGDSSAFPWTDSSPCLFGSESDKDSQRFDRSCEKPR
DYFGLLDTPKRSLAHSAKQISESLGAQINPDLSWTSSFNTPSSLAPTVILPETEEHAPSA
SGLKDKEATFVRKLFPSLSKGSASNATLSDTSLKQEVIAESETIQSDDLGEKPVCSPNTS
LDTSGLWKQKVPSAIEDGDVRNTVQNVLDGAEDVLSIFFSNSTATLRRSKTKERIRRRIT
DSSKDVKSVVLTSESEEILKDDVETKRPCKNKDDTQWTPLSFSESTLNIDCSDVSLINNH
NNVASSEINGCTVFNCIAENSQTFPQTVRLKSYPEGTQCQKPLLDKSPAFMLSRKPRKFV
YQVPSSDLSKTVIEHKETQPVCLDQTLKENPSVEEVSSDLNKSTVASENAINNHTQPQDF
KQLSTEIHDPDLGLDMTQLSKAFAEDFTQEIMPGALLDVAVKGDQNGQVQHKAELEEKNE
DGSQNDISNLADISVNSPNKSTVMLTTFEISHDSGCPTTFSDLDSTTTSCADIKEFFPSF
KMANNKAISIPNKTIMKAKASLDEAAGDVLINTLNGTTLKHQTIETLCKSVSGSTNANRS
PIEQSIFPNHASRLRVSDAPKSDSSKSFKINISSCSSPQSNESDYKTGLKRNITVSNVGF
LTETLLKEELGRGSDSSKCIHQKLDFKRIAERQTMFNINSAHNPTAVDSSREDDEENGTL
TASQKADVTELCNLLEEANSQHEFTQSKPANHFSDNHTTEKEWDPDILYGIDFDDSFNCD
VKEKHPIKTDSSSVNASDHIQIVDAYKLPCPMSKETQNGIVPLSVAEDGSLVDGIKSIQS
HFSDNTPVHFFGFKTAKGEAISISEKSLNNARHVFEEDDQKAVCIKEVKVDIGLIKPEHV
ETEPTFNTFDSMSTENKTYLQIKQDVNFSSLNVNAACKERNKQVIENEGTEQNCLGEKTD
VFCVDSNSHFGFSTASGAKLKVPEKALLQARKLLNDVDSLEESQTHKLTLHASGNHNGSM
STTSLKKTKAVSRSNTSIKISEPYLVTKISDGVDRLCFNSEKVFQEQKSSSDPKEVFSKI
FPTETFSLQSEEGYGFQTASGKGVSVSACALKKAKDIFKDCDENIDLKMEGINDKLDVEI
KQVNAFTPNCKRVTFSDVSFMEANTVLNDSDVTDDDLLLSSSVQQPPQKDLQSEFSKHPY
ELLPRNGNCGFSTASGKKVSISAGALQSSKDLLSDDGFSCADGSPKTKKVVDIQTDTSSI
RKHKGFSTADGKKVAVSAAGLQRAKNLFRDCEEERLSFEDLQHQNFKGFSDVSKKPLTKI
RMAFAGCSDISFSHEHETGDSSGNNIGFSTAGGKKVAVSATGLQRAKSLFKDCEEESLAS
GSHHHQVCQGFSTASGKDVTISEKALSEVRAALAGCDDTSFHHEPENTSGNNIGFSTAGG
KKVAISATGLQRAKSLFKDCEEESLASGSHHHQVCQGFSTASGKDVTISEKALSEVRAAF
AGCDDTSFHHEPENSSRNNIGFSTAGGKKVAVSATGLQRAKCLFKDCEEESLASGSLQHQ
VCQGISTASGKDVTVSEKALSEVRAAFASCDDTSFHHEPENTSGNNIGFSTAGGKKVAIS
ANAVQRAKCLFKDCEEENLSYEEVPPQTKSSHKSSEDMVDGNLKFEQLNKKNYGFSTAGG
KGVSVSEVALEEASKLFRDCDAQVTFTDSQLLQSDSSECRPQHKDRQTKTTLHPLPSKAT
QNEHAKLDLHSLDFYSCTDTQQKYFEQEAMACTKALLADDDLNESGSLAMTEDQKYPFVH
ELQAQGSFGHKRRKRPFDARNIAGQPPLKRQLLSEFDRTLDTKTSGLTPLKSCPNGTLRD
RRVFSYNVHLKSNVTGPDWHPVDQKSDDLEQPCSTVSIQNRCYSDPKGGVFVPPFQKGMK
TGTSVCQDVSEVSTGFIPPFKKENKETTEHSNQIDQTSISHNDSVARYCDRKNQHEGSDP
KPTTSVESIPLKIMDSEEKDTEACWETLNLARDMQDMRLRKKKRQTIRPLSGSLYLAKTS
GVPRIGLRDAVGRKCPGQYTQEELYQHGVHHKVSLIKSENAESFRFDCNDFFKCEVLMES
GAVQLADGGWLVPDNKGSVGKDEFYRALCDTPGVDPKLISDTWVFNHYRWIVWKRASMER
TFPDLMGNLCLTPEQVLLQLKFRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGVAQT
GQHPEKPVKDDKTPNAKMETCVVWLTDGWYSIKGQLDIPLSAMLNKGRLQIGDKIVTSGA
ELVGSQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDPRPISFPLSSLFTAGGVVS
CVNIVVLRSYPTQWMEKKPNGVFIFRNDRAEDREARKHSISKHKSMDLLISKIQTQFEKE
MEGKKKSQGQRRTFSRHEIEALQDGEELYEAMERDPAVETHLSASQMDAVSKYRRCLEEK
RQAELQERVQKAVMEAQEAEGGCPNRDVTPVWKLSITDAKDLQSNCVYTLNIWRPSQDLY
GLLREGHRYRAYHLATSEGKKRSGIAHIQFTATKKTLFQDVEVSPEWLHQHFRARECVSF
KELQNPQFSSPCGEVDIVGCIVSIDGKQGRCPLLHLVDENFDLVSVRTYSSLEQLAVEEL
VKLRALVALSNLQARPYSGPVPSLYAGEQAVFSVNPKESHLQEAMTRLKTFVQTCQHFFS
IAEEKVSDVVPSGVLSSFQSPRTPCVQSNPKINGRVTPQQKSVIFSPFTPLNRRTPASAC
NSEGKDPKCLKRRRGLDYLSRIPSPPPLTPLQKTASPCVNRTFNPPRRSVTPKPPQNESP
RASCPPPGEEKWVHDEELAMIDTQALLEG
NT seq
8730 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaacttctttaatcaaattgacaaagagcttggacctcttaatcctgactgg
tttgaggagttgactgcaaaagctttcagagatgaagggcgtcctaaaagttcaaaagtt
gaggaggaggagactgtcaaagtatcagccacatcagccctggccagccattctacaccc
aaaatattcaagcaaccacactttcagtcccctgcttccattcttaatgaagagtcccct
tatgaagtggttaatggagactcatcagcttttccctggacagattcaagcccttgtttg
tttggttcagagtcagacaaagacagtcaaagatttgatagatcctgtgaaaaacctaga
gattactttggccttctagatacaccaaaaaggtctttggcacattcggcaaaacagata
tctgagagcctgggggcacaaatcaaccctgacctatcctggaccagctcctttaacaca
ccatcctctttggctcccactgtgatattgcccgaaacagaggaacacgctccatcagca
agtggcctcaaagacaaggaagcaacttttgtccggaaactcttcccatctctctcgaaa
ggatctgcaagcaatgcaacattaagtgatacatcactaaaacaagaggtgatagctgaa
agtgagactattcagtctgatgacctgggagaaaagcctgtttgctctccaaatacatct
cttgatacaagtggtctgtggaagcagaaggttcccagcgctatagaggatggggacgta
cgcaacacagtgcagaatgttcttgatggtgcagaggacgtattgtcaatattctttagc
aacagcacagcaactctgcgaagaagcaaaaccaaggagaggatcagaaggagaataaca
gattcctcaaaagatgtcaaatcagttgttctaacttcagagtcagaagagatattaaag
gatgatgtagaaacaaaaaggccctgcaaaaacaaagatgacactcaatggactccccta
agtttctcagaatccactcttaatattgactgttcggacgtgtctttgataaacaatcac
aacaatgtagcatccagtgaaattaatggttgtactgttttcaactgcattgcagaaaat
agccaaacttttccacagactgtaagactcaagtcttatccagaaggaactcagtgtcag
aagcctttgttagacaaatcgcctgctttcatgctttctagaaagcccagaaagtttgtg
tatcaagtgccaagttcagatctgtcaaagacagtaattgaacacaaagaaacccaacca
gtatgtttggaccaaacactcaaagaaaatccctcagtggaagaggtgtctagtgacctt
aataaatccacagtcgccagtgaaaatgcaatcaataatcatacacagccacaagacttc
aaacagttatctacagaaatccatgatcctgatttaggactggatatgacgcagctttcc
aaggcatttgcagaggatttcacacaagaaataatgccaggagcactgcttgacgtggct
gtaaagggtgatcaaaatggccaagtgcaacataaagcagaactggaggagaagaacgaa
gatggtagtcaaaatgacatctctaatttagcagacatatctgtgaactctccaaacaag
tcaacagtcatgcttacaacttttgaaatcagtcacgacagtggttgccccaccaccttt
tcagatttggatagtacaacaacctcttgtgcagacatcaaagagttttttccttctttt
aaaatggcaaacaacaaggccatttccataccgaataagactataatgaaggccaaagca
tcattagatgaagctgcaggggatgttttgatcaacacattaaatggaactactctgaaa
catcaaacaatagaaacattgtgcaaatcagtatcgggaagcactaatgcaaacagatcg
cccatagaacaatccatcttccctaaccatgcatcaagactgcgtgttagcgatgctcca
aagagtgacagttcaaagagctttaaaattaatatttcaagctgctcttcaccacagtca
aatgaatctgattataaaaccggtttaaagaggaatattacagtttcaaatgttggcttt
ctaacagagactctattgaaagaggaattggggagaggttcagactcatcaaagtgcatt
catcaaaaattggatttcaaaagaattgctgaaagacagaccatgttcaacattaatagc
gcacacaatcccaccgcagtggactccagccgtgaagatgatgaggagaatggcacgttg
acagcatctcaaaaggctgatgttacagaattgtgcaatcttttggaggaagcaaatagt
caacatgaatttacccagtccaaaccagcaaatcatttctcagacaaccacactacagag
aaagagtgggatcccgatatactctacggcattgactttgatgatagttttaactgtgat
gtgaaagaaaagcatcccatcaagacggactcttcttcagtaaacgcttctgatcatatt
caaattgtagatgcttacaaattaccatgccccatgtcaaaggaaacgcaaaatggcatt
gtgcctttgtcagtggctgaagacggttctttagttgatggaattaagagtatacagtct
catttcagtgataatactccagttcatttttttggttttaaaactgctaaaggggaagct
ataagcatatcagaaaagagtttaaacaatgcaaggcacgtttttgaagaggatgatcaa
aaagccgtgtgtattaaagaagtcaaggtggatattggattaataaagccagaacatgtt
gaaacagagcctacattcaatacttttgatagtatgagcacagaaaataaaacctacctt
cagattaaacaagatgtaaatttcagctctctaaatgtaaatgcagcttgtaaagagaga
aataagcaagtgatagaaaatgaaggaacagagcagaattgtttaggtgaaaaaacagat
gttttttgtgttgactccaatagtcattttggttttagtacagccagcggagcaaagctg
aaagtgcctgaaaaggctctcctgcaagcaagaaaacttcttaatgatgttgacagctta
gaagagtcacaaacacacaaactcactctccatgcttctggaaaccataatggctctatg
tcaacaactagccttaagaaaacaaaagcagtttctaggagtaatacctctataaaaata
agtgagccgtacttagtaaccaaaatatctgatggtgtggataggctttgcttcaacagc
gagaaggtctttcaagaacagaaatctagcagtgatcctaaagaagttttctcaaagatt
tttcccacagaaactttttcgcttcagtcagaggaaggctatggttttcagaccgccagt
gggaaaggagtttcagtttcagcctgtgcccttaagaaggcaaaggacatatttaaagac
tgtgatgaaaatattgacttgaaaatggagggaatcaatgacaaactggatgttgaaatc
aaacaagtaaatgcatttactccaaactgtaaacgtgtgacattttcagatgtgtcattc
atggaggccaacactgttctcaatgactctgacgtgaccgatgatgacttattgctgtcc
tcttcagtccagcaaccccctcagaaagaccttcagagtgaattttctaagcatccttat
gagttgcttcctcgtaacggcaactgtggtttcagtactgccagtggtaagaaggtgtcc
atctcagctggagcactacaaagtagtaaggatctgttgtctgatgatggtttctcatgt
gctgatggatctccaaagacaaagaaggttgttgatattcaaacggacactagctctata
agaaaacacaaaggattctctacagcagatgggaagaaggtggctgtctctgctgcaggg
ctgcaaagggcaaagaatctcttcagagattgtgaagaagagcgcttatcatttgaagat
cttcagcaccaaaactttaaaggtttcagtgatgtctcaaaaaagccactgactaagata
aggatggcatttgcaggttgcagtgacatctccttcagccatgagcatgagactggggat
tcttcaggaaacaacataggattctctacagcaggtgggaagaaggtggccgtctctgct
actgggctgcaaagggcaaagagtctttttaaagattgtgaagaggagagtttagcttct
gggagtcatcaccaccaagtctgtcagggtttcagcactgccagtggcaaagatgttacc
atctccgaaaaggcactgagtgaggttagagcagcattggcaggttgtgatgacacctcc
tttcatcatgagcctgaaaatacttcaggaaacaacataggattctctacagcaggtggg
aagaaggtggccatatctgctactgggctgcaaagggcaaagagtctttttaaagattgt
gaagaggagagtttagcttctgggagtcatcaccaccaagtctgtcagggtttcagcact
gccagtggcaaagatgttaccatctccgaaaaggcactgagtgaggttagagcagcattt
gcaggttgtgatgacacctcctttcatcatgagcctgaaaattcttcaagaaacaacata
ggattctctacagcaggtgggaagaaggtggccgtctctgctactgggctgcaaagggca
aagtgtctttttaaagattgtgaagaggagagtttagcttctggaagtcttcagcaccaa
gtctgtcagggtatcagcactgccagtggcaaagatgttaccgtctccgaaaaggcactg
agtgaggttagagcagcatttgcaagttgtgatgacacctcctttcatcatgagcctgaa
aatacttcaggaaacaacataggattctctacagcaggtgggaagaaggtggccatctct
gctaatgcagttcagagggccaagtgtctttttaaagattgtgaagaggaaaatttatca
tacgaggaggtcccacctcaaactaagagttctcataaaagcagtgaggatatggtggat
ggaaacctaaaatttgaacaacttaacaagaaaaattatggtttcagtactgcaggtggg
aaaggtgtgtctgtatcagaagttgcccttgaggaagcttctaaattattcagagattgt
gatgcccaagttacttttactgatagccagctgctacagagtgattcctcagaatgccgt
cctcaacataaagatagacaaaccaaaaccactctgcatcctttgccatctaaagcaact
cagaatgaacatgcaaaactagacttgcactctttggatttttacagttgcacagacacc
cagcagaaatactttgagcaggaagcaatggcttgcactaaagctttactggcagatgat
gacctgaatgaatcaggcagtttggcgatgacagaggaccaaaaatatccatttgttcat
gaactacaggcacagggatcttttggccataagagaaggaagcgtccatttgatgccaga
aatatagcaggtcagcctcctttgaaaagacaacttctctcagagtttgaccggacgtta
gatacaaagacctcaggcctcacaccacttaaaagctgtccaaatggaacgttaagagac
aggcgtgtcttcagttacaatgtccacctcaagtcaaatgtcactggtccagattggcat
cctgtggaccaaaagtcagatgacctcgagcaaccgtgttcaactgtatctatccaaaac
agatgctactcagaccctaaaggaggggtgtttgtgcccccttttcaaaagggtatgaag
actgggacatcagtctgtcaagatgtttctgaagtgtccacaggttttatcccacctttc
aagaaggaaaacaaagaaacaactgaacatagcaatcaaatagaccaaacttctatatca
cataatgacagtgttgcacgatattgtgataggaagaaccaacacgagggttctgaccct
aaaccaaccacttcagtggaaagcatacctttgaaaatcatggactctgaagagaaagac
acagaggcatgctgggagaccttgaacctagctagggatatgcaagacatgagactcaga
aagaagaaaaggcagactattcgtccactatctggcagcctttaccttgctaagacgtct
ggtgtccccagaataggtctgagagatgctgtgggacgcaaatgtcctggtcaatacaca
caggaggagctgtatcagcatggtgtacatcacaaggtctcactaataaaaagtgaaaat
gctgaatcattcagatttgactgtaatgacttcttcaaatgtgaggtcctcatggagtct
ggtgctgtccagctggcagatggaggctggttggttccagacaataagggttctgtgggc
aaagatgaattttatagagcattgtgtgacacacctggtgtcgatcccaaactgatcagt
gatacctgggtattcaaccattaccgatggattgtatggaaacgggcctccatggaaaga
acgtttccagatttgatgggtaacctatgtttgactccagagcaagtacttttgcagcta
aaattcagatatgatgtggaggtggaccacagtcagcgatctgctctcaggaggatcatg
gagagggacgacactccagctaagacgttagtgctctgtgtatgtggtgttgctcaaact
ggtcaacatccagaaaagccagtaaaagatgacaaaactcctaatgcaaagatggagacc
tgtgtggtctggctcacagatggctggtattccatcaaaggccagttagacattccgctc
tctgccatgctgaacaagggccgtctccaaatcggtgataagattgtgaccagtggagct
gagttggttggttcccaagaagcctgtcctcctctggaagctcctgaatctctgatgcta
aagatttcagccaacagcacaagacgagctcggtgggacactaagttgggttactatcgt
gaccctcggcctatcagctttccactgtcatcactgttcactgctggaggtgttgtaagc
tgtgtgaacattgtggtgttgagaagttaccccactcagtggatggagaagaagcccaat
ggtgtctttatatttcgcaatgatcgtgcagaagatcgagaggccagaaaacacagcatc
tccaagcacaaatccatggatcttcttatttccaaaatacagacccaattcgaaaaagaa
atggaaggtaaaaagaaaagtcaaggccaaaggaggacatttagtcgacatgagattgaa
gcactgcaggatggggaagagttatatgaggcaatggagcgggatcctgctgttgagacc
catctaagtgcgagtcagatggatgcagtgagtaagtacagacgctgtttggaggaaaag
aggcaggcggagctgcaggagcgtgtgcagaaggctgtaatggaagcccaggaggctgag
ggtgggtgtcccaatcgagatgtaactcctgtttggaagctcagcattactgatgccaaa
gacctgcagagcaactgtgtttacaccctgaatatctggcgcccatcgcaagacttgtat
ggcttgctcagagagggccacagatatagggcgtatcatcttgccacatcagaggggaag
aaacgctcaggcattgctcacatccagttcactgccaccaagaaaacactcttccaggat
gttgaggtgtctccagaatggttgcatcagcattttcgtgctcgagaatgcgtaagcttc
aaagaacttcaaaaccctcagttcagctcaccttgtggggaggttgacatagtgggatgt
attgtctctatagatggcaaacaaggccgttgcccattactgcatcttgtggatgagaac
tttgacctggtctctgtgagaacctacagtagtctggagcagttagctgtagaagagctg
gtaaagctgcgagcactggtcgctcttagtaatcttcaggcgagaccatactctggacct
gtgccaagcctttatgcaggagaacaagcagtattttctgtaaaccccaaagaatcccat
ctacaagaagctatgacccgtctgaagacttttgtccagacttgtcagcattttttcagc
attgcggaggagaaggtctcagatgttgttccttcaggtgtcttgagttcttttcagtct
ccaagaactccttgtgtgcagtctaatccaaaaattaatggcagggtaaccccacagcag
aagagcgtcattttctcacctttcactccactgaataggagaactcctgcatctgcatgt
aacagcgagggaaaagaccccaaatgtttgaaaagaaggcgcggtttggactacctgtca
cgtatcccatcccctccacccctcactcctctgcaaaaaacagcttctccctgtgttaac
aggaccttcaatccaccacggagatctgtgactcccaaacctccacagaatgagtcacct
cgagcctcatgtcccccaccgggcgaggagaagtgggtgcatgatgaagagctggcgatg
atagacacccaggcgttacttgaaggctga
DBGET
integrated database retrieval system
