Cyprinus carpio (common carp): 109104099
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Entry
109104099 CDS
T05134
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109104099 (irx1b)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109104099 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Roughex
Motif
Other DBs
NCBI-GeneID:
109104099
NCBI-ProteinID:
XP_018972998
Ensembl:
ENSCCRG00000013433
UniProt:
A0A9Q9ZKF9
LinkDB
All DBs
Position
B19:complement(8057196..8060287)
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AA seq
447 aa
AA seq
DB search
MSFSQLGYPQFLNASQEMYGAERTAVMPCSPREGSSENSANSATAAAAIAPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHAAPGFYPYGQYQYGDPAR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRIFDSDNEDDADKNDDEEEIDLETIDMDKPEEPRGDQNKESSDNLSER
GNVETPRILSSPSALKNTDSPISNCSNKEQSVAKSVGEVSPGAPVCQRPGNSKPKIWSLA
ETATSPDNTQKLGVSSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLM
GVRSLLSQNNNFPNHSPVTNPEKKPSSASGSPCLDSDSSSDSFSPKHNDQENVRRIESPT
LASRSPFPVIHDRSHHETSQRALKTIS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcccagctgggttacccacagtttctaaacgcctcccaagagatgtacgga
gcggagcgcacggctgtcatgccgtgctctccgcgcgagggaagctcggagaacagcgca
aattccgcgactgcagcggcggcgatcgctccgatgctcggcatgtacgcgaacccgtgg
accgtgcaaaactatagcgccttcttaccttacaacagtgccgagctggccctcctctct
cagatggggtcgcagtatgagttgaaggataaccccggggcacatccaccaggatttgcg
gtccacgctgcgcccggtttctacccatacggccagtaccagtacggtgatccggcccgg
gccaagagcgctaccagagagaccaccagcacactgaaagcatggctgcaggagcataaa
aagaacccgtatcccaccaagggcgagaagatcatgctggccatcatcactaagatgacc
cttacgcaggtgtccacctggttcgccaacgcgcgccggagactcaagaaggagaataaa
gtgacctggggtcgcagcgcggaggacagagacggacgaatttttgacagcgacaatgag
gacgacgcggacaaaaacgacgacgaggaagaaattgatctagagaccatcgatatggac
aagcctgaggagcccaggggagaccagaacaaggaaagctcggataatctgagcgagaga
ggaaatgtggaaacaccgcggatattatcctcaccatcagcacttaaaaacacggacagc
cctatctctaattgtagtaataaagagcagagtgtggccaaaagcgttggtgaggtgtct
cctggtgcaccggtgtgtcagaggcctgggaacagcaaacccaaaatctggtccttggcg
gagacggcgacaagtcccgataacacgcagaaactcggtgtctcctcgacgcccgcaggc
ctcagggcctcgccctcgacccatcccgctttcctctccactaacgggatttatacatgc
cagattgggaaactacacaactgggcgagcgccgctttcctcagtgcaaattctttgatg
ggtgtacgttcacttctgagtcaaaacaataacttcccaaaccacagccccgttacgaac
cccgaaaagaaaccctcgtctgcctctgggtctccttgtctagacagcgacagctcatcc
gacagtttcagtcccaaacataatgatcaagagaacgttcggagaattgaatctccaaca
cttgcgtccagatcaccgtttccagtcatccatgacaggtctcatcatgaaacatcacaa
cgcgctctgaagactatttcatga
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