Cyprinus carpio (common carp): 109104217
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Entry
109104217 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109104217
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109104217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109104217
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109104217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109104217
NCBI-ProteinID:
XP_042626975
Ensembl:
ENSCCRG00000008218
UniProt:
A0A8C1YJF1
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All DBs
Position
A15:complement(12164068..12166905)
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AA seq
257 aa
AA seq
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MSAEMSGSVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFA
FVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGGGGAPRGR
YGPPSRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYA
VRKLDNTKFRSHEGETAYIRVRVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRS
RGSPQYSPRHSRSRSRS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagatgtctggcagcgtgatccgcggccctgctggaaacaacgactgccgc
atctatgtggggaatctgccgcctgatatccgcaccaaagatgtcgaagatgtcttttat
aagtacggagccattcgagacatcgatctgaaaaaccgacgaggcggacctccattcgcc
tttgtcgagtttgaagacccgagggatgctgaagatgctgtttacgcccgtgatggctat
gactatgatggctatcgtctccgagtggagtttcccaggagcgggagaggaggttttggt
ggaggtggtggtggaggtggtggtggtggtggaggaggtggtggggctcctaggggtaga
tatggacccccatccagacgttcagagtacagagtaatcgtttcagggcttccacagagc
gggagctggcaggatctgaaggatcacatgcgcgaagcaggtgatgtatgttacgctgac
gttttccgagatggcaccggtgtggtggagtttgttcgcaaagaagacatgacctacgcc
gttcgcaaactggataacacaaaattccggtcccacgagggagaaactgcgtacatccgt
gtgagggtggatggtccccgcagtccgagctatggaagatccaggtcaaggagccgcagt
cgcagcaggagtcgcagccgcagcaacaaccgtagccgaagctactccccacgccgcagt
cgaggatccccgcagtactctcctcgccatagccgctcccgctctcgctcctaa
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