Cyprinus carpio (common carp): 109104219
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Entry
109104219 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 1A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109104219
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109104219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109104219
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109104219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109104219
NCBI-ProteinID:
XP_042595205
UniProt:
A0A9Q9X4Z1
LinkDB
All DBs
Position
B15
Genome browser
AA seq
256 aa
AA seq
DB search
MSEEMSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFA
FVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGGGAPRGRY
GPPSRRSENRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAV
RKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSR
GSPQYSPRHSRSRSRS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatgtctggtggtgtggtccgcgggcctgctggaaacaatgactgccgc
atctatgtggggaatctgccccctgatatccgcaccaaagatgtcgaagatgtgttttat
aaatacggagccattcgagacatcgatctgaaaaaccgacgaggcggtcctccattcgcc
tttgtcgagtttgaagacccgagagatgcagaggacgctgtctatgcccgtgatgggtat
gactatgatggctatcgtcttcgagtggagttccccaggagcgggagaggaggttttggg
ggcggaggtggaggtggtggtggtggtggaggaggtggtggggctcctaggggtagatat
ggacccccctccagacgttcagagaatcgagtaatcgtatcagggcttccaccgagcggg
agctggcaggatctgaaggatcacatgcgtgaagcaggtgatgtatgttacgctgatgtt
ttccgagatggaactggtgtggtggagtttgttcgcaaagaggacatgacctacgccgtt
cgcaaactggataacacaaaattccggtctcatgagggcgaaactgcgtacatccgtgtg
aaggtggacggtccccgcagtccgagctatggaagatcaaggtcaaggagccgcagtcgc
agcaggagtcgcagccgcagcaacaaccgtagccgaagctactcccctcgccgcagccga
ggatcaccgcagtactccccgcgccatagccgttcccgctctcgctcctaa
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