Cyprinus carpio (common carp): 109104573
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Entry
109104573 CDS
T05134
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04137
Mitophagy - animal
ccar04140
Autophagy - animal
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109104573
04137 Mitophagy - animal
109104573
04148 Efferocytosis
109104573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109104573
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109104573
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
109104573
NCBI-ProteinID:
XP_042595518
Ensembl:
ENSCCRG00000004936
UniProt:
A0A9Q9X5B0
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Position
B15:complement(17854846..17866896)
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AA seq
633 aa
AA seq
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MVNSAKKRPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVAL
SYLRMNRLIQSAGPTKTPTEETENPTDAFYQQALAGFILVMTEEGDMVFLSESVSKYIGI
TQLELLGQNVYEFVHPCDQEELRDILATRPGVSKKKTEKSTEHNFFLRMKSTLTHTGRTV
NIKSAAWKVLHCTGYMQTFSGDGENAPPAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHN
MDLSFTQCDGRVTELIGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRF
LAKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCEKPKPRAEK
LSVLKKEEEDSDMEEESSTAKLFLQMKENPEDLLQLAPHSGDAVISLTDCVELSFCCPSS
LNSVPECPQDFCTPELRQLLSPIFDRPTKSPPAASPAEELPVEIEGVEKFFALKPEESVT
LKGQTEATDELDLDMLAPYISMDDDFQLTFLPQGEMAVPSDMLTCNTSRKRCLEDEEEDD
IPVLAAKREKKPMSGSIEERLLLSHTLLNSLPDDGSEEFEQPPQKRCQLLTDRDPLLGGA
QALCDTAALMRDTFLSRPPDLKRPIAETMPSLT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcagcaaagaaacggcccagtttggagcagcggaaggtgcgttcacgtgac
gcggcacgctgtaggaggagtcaggagactgaggtgttttacgagctggcccattcatta
ccccttccacgacgtatagcctcccacctggacaaagctgccatcatgagggtggcactc
agctatctgcgcatgaaccgcttgatccaatcagcagggccaaccaaaacaccgactgaa
gaaactgagaatcccactgatgccttttatcagcaggcactggctggcttcattctggtg
atgactgaggaaggggacatggtcttcctctcagagagtgtcagcaaatacatcggcata
acacagctggagctgcttggacagaacgtgtatgaatttgttcatccctgtgaccaagaa
gaattacgagacatccttgccacaagacctggcgtttcaaagaaaaagacagagaagtca
accgaacataatttttttcttcggatgaagagcacactcacccacacaggaagaacagtt
aatatcaagtctgcagcctggaaggtccttcattgcacaggatacatgcagacgttcagc
ggtgatggtgagaatgcaccccctgctggcagcttcctgactttgctgtgcgaacccatt
cctcacccctccagcgttgaattcccactagacagcagcactttcctcacacgccataac
atggatttgagtttcacacaatgtgacggacgagtcactgagctcattggataccaacct
gatgatctgattggccggtctgcctatgagttttatcacgcccttgattttgatcatgtg
accaggagtttacacatcttgttctccaagggccaggtgtgcaccagccattaccgcttc
ctggctaagaatggaggatttgtctggactgagactcaagccactgtcctctacaacagc
aggacctctcaacccgaggctgtggtctgcctcaactttatcctcagtggtgtagaagag
gcggatgttgtgttctcattagaacagacctgtgagaaacctaagcccagagctgagaag
ctgagcgtgctgaagaaggaggaggaggactccgatatggaggaggagagcagcactgcg
aaactcttcctccagatgaaggagaacccagaggatttactgcagctggcacctcattct
ggagatgctgtcatttccctaacagactgtgtggagttgtccttctgctgtccatctagt
ctcaacagtgtcccagaatgccctcaggacttctgtacgcctgaactccgtcagctcctt
tctccaatattcgaccggcccaccaaatctccacccgctgcgagccccgctgaagagctg
cccgtggagatagaaggggtggagaagttcttcgccctcaaaccagaggagagcgtaact
ctgaaaggacaaacagaggctacggatgagcttgatttggacatgttggctccatatatc
tccatggatgatgacttccagttgaccttcctgccccagggtgaaatggctgtaccatca
gatatgctgacctgtaacacttcaaggaaacgatgtttggaagatgaggaggaagatgac
attcctgttctggctgccaaacgggagaagaaaccaatgagcggctccatagaggaacgg
cttctgctcagccacacattactgaatagcttgcctgatgatggttcggaagaatttgaa
caaccacctcaaaagcgatgtcagctgttgaccgacagggacccgcttctgggcggagcg
caggcattgtgtgatacagcagctctcatgagggacaccttcctgtcacgcccgcctgac
ttaaagagacccattgctgaaacaatgccgtctcttacttga
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