Cyprinus carpio (common carp): 109104611
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Entry
109104611 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccar03016
]
109104611
Enzymes [BR:
ccar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
109104611
Transfer RNA biogenesis [BR:
ccar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109104611
Prokaryotic type
109104611
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
109104611
NCBI-ProteinID:
XP_042571748
UniProt:
A0A9Q9ZS25
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All DBs
Position
A25:complement(19191233..19213472)
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AA seq
702 aa
AA seq
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MTYARGGASWRIRFRGMCESGEARVWMFCGAVRVVCARSVLFCSHSVFKRIFRLKRSGFT
VTHALHFLQLPSEISGTMEEAEACPVPVLTAEKRSLPDEDPDHAAKRLRVEEEEESRGED
EEEQLEEEVEESFADMMKHGLSEPDVGILKFISEHKGFSGVLKERYSDFVVHEINKDGKV
VVLDDLSVPAEAEESSPDCSCAESQTLTEEQKKQLDELQLFKNKEGSVSIEVQEDSKEKR
TLLHRAVKTLYPGLETKTEDREGKKFIVAYHAAGKTALAELRPSAAPRKHSWPKNRGSFC
HFVLYKENKDTMDAINVLSKFLRVRPNMFSYMGTKDKRAVTVQEIAVLKISAERLSHLNK
CLMNLKLGNFSYKKWPLKLGELQGNHFTVVLRNISGSLEQVEQAMTSLRETGFINYYGMQ
RFGTTAVPTHRVGRAILQNNWKEVVDLILKPRPGAEKGYLVKCREEWARSQDPEAALKKL
PVKRCVEGQLLRGLAKYGKNNIITAFGLIPRNNRLMYIHSYQSYVWNCMVSKRMEAFGLR
AVEGDLVLRGSSAHVLSAEEAEKHSVHDVVMPLPGFDVIYPTHSVGGGYRDMLSADDLDI
DSMRHKVRDYSLAGAYRRILIRPRDVSWELIQYDDPRVPLVHTDVXLENAPAPVYLKEGK
YRALKMEFSLPSSTYATMAVREVLKMDTSIKNQTQLNTSWLN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacatacgcgaggggcggggcttcgtggcggattcgtttccggggtatgtgcgagtca
ggggaagcacgtgtgtggatgttttgcggagctgttcgtgtcgtgtgcgcgcggtctgtg
ctgttttgttctcattccgtgtttaagcgcattttccgccttaagagatccggctttact
gtcactcacgcgctacactttctgcagctgccgtccgagatctcgggcaccatggaggag
gccgaggcctgtccggtcccagttctgaccgcagagaagcgctccctccctgacgaggat
ccggatcacgccgccaagaggctccgagtggaggaggaggaggagagccgaggagaagat
gaggaggagcagctggaggaggaggtggaggagagcttcgctgacatgatgaagcacggc
ctcagcgagccagacgtgggcatcctcaagttcatcagcgagcacaaaggcttctcgggc
gtcctgaaggagaggtactcagacttcgtggtccatgagatcaataaagacgggaaggtc
gttgtcttggatgatctgtccgttcctgctgaggccgaggaaagctctccggactgcagc
tgtgccgagtctcagactctgacagaggagcagaagaagcagctggatgaactgcagctc
ttcaagaacaaagagggaagcgtatccatcgaggtgcaggaggattcgaaggagaagcgc
actcttctgcacagagctgtgaagacgctgtatcccggcctggagaccaagaccgaggac
agagaagggaagaagttcatcgtggcgtatcacgccgctgggaagacggcgctggcagag
ctccggccctcggcagcccctcgaaagcactcgtggccaaagaaccgcgggagtttctgt
catttcgtgctctataaggagaacaaggacaccatggacgccatcaacgttctgtccaag
ttcctcagggtcagacccaacatgttctcctacatgggcaccaaagacaagagggccgtc
acggtgcaggagatcgcagtgctgaagatcagcgctgagagattgtcccacctcaacaaa
tgcctcatgaacctgaagctgggaaacttcagctataagaaatggccattaaaactggga
gaactgcagggaaaccacttcacggtggtcctcaggaatatctctggctctctggagcag
gtggagcaagccatgacctcactcagagaaaccggcttcatcaactactacggcatgcag
cgcttcggcaccacagccgtgcccacacacagagtcggcagggctatactgcagaacaac
tggaaggaagtcgtggatctcatcctgaaacctcgtcctggagcggagaagggctatctg
gtgaagtgcagagaggagtgggcacgctctcaggacccagaggcggccctcaagaaactg
ccggtcaaacgctgcgtggagggtcagttactgcgaggccttgccaagtacggcaaaaac
aacatcatcacagccttcggactgatcccccgtaacaacaggctgatgtacatccacagc
tatcagagctacgtctggaactgtatggtcagcaaacgcatggaggccttcggactcaga
gccgtggagggagatctggttctcagaggaagctctgctcacgttctgtccgctgaagag
gcagagaaacactccgttcatgatgtggtgatgccgctgccggggtttgacgtcatttat
cccactcacagcgtgggtggaggctacagagacatgctgagcgctgatgacctggacatc
gatagcatgaggcacaaagttcgggattactctcttgccggcgcttacaggaggatcctc
attcgccccagagacgtcagctgggagctgatccagtacgatgatccacgagtgcctctt
gttcacacagatgtanaattagagaacgctccagctccggtttacctcaaagaagggaag
tatcgtgccctgaagatggagttttctctgccgtcctccacatacgctacgatggccgtc
agagaagtgctgaagatggacaccagcatcaagaatcagactcagctcaacaccagctgg
ctgaactga
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