Cyprinus carpio (common carp): 109104681
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Entry
109104681 CDS
T05134
Name
(RefSeq) protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109104681
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109104681
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109104681
NCBI-ProteinID:
XP_018973507
UniProt:
A0A9Q9VH42
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Position
A16:3614792..3653943
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AA seq
1420 aa
AA seq
DB search
MFSSESPQYLRQGLSMFVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHP
QAASLKKEAQSGSVLKEIIEGAPNPSSRPTPSADELPPEREKDAERERPDSETESDVDDP
FFPGVLPDPPISASPGKRRSQSLSALPKDDKTSPGKREKDHIRRPMNAFMIFSKRHRALV
HQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSS
SEGRGVPGGKDIRERSMSETTEPPSVSMGMELKGVGPGMVSVSERVGAEGQGQLPRPRAF
SQSAMHNLERSERGNPQALAELAQMCGDGGQVARRGALSQTQRGVSEDMTSDEERMVICE
EEGDDDVIDDSYPGSSIDLKCKERVTDSDSENGSGDEGERKRVFAPVICSSSYGHGRSVS
LSSYPSSRRFSDASSKRKRAVEGGDGERREGEGAVSQPSAGQSILVSSAGGVSSVLGAVR
VASTVVTNVVRPVVSTPVPIASKSPHDRKPAPPQTQLYIGPGTTGNPATASGGGGGYYSS
SSPNPVSASGAQGGLVTNLVLGGTFQAPPGVQLVTPPPPQNPASPASAPLTHSNGPLPLP
VLQSHILPSASITPSSGQKPITQVQYIIPTLSANNPKSPSPHQAGQPTNIFTLPTALPTH
ASLANGKQSGYVSSPAVGVVSPGARVQTQSPVLQGKMLVPMATVRAAPAASQQFPLVAPP
LPVQNGGQAGSKVRSQMIFQIAPMPVVQSQLPSTGPVQPGSPFSVTMGTATVVAPGSTPS
QTVLLPTPPTRITYVQSAPGVPSPLPLVPTTTVSSSQTASATPGSAYVPSPLATFAAIAH
PGQTLVQPLIAGQPSLLAPAQSPSAPHAPAISAIYTPTNVTLATGVVSMATVSPSVVYTV
SSSSCLSPHILPKHTIMTSMTSVTSDRQGNVSTHSERQLHQERTLDRQHTDSQVYTQSSE
RQTEKISLLQPDKQFQFPSKSSSSSVAPSPGTSVPLQPGSPAQTSHSGSAPGTPKLITPR
PPQKVKATVANIPVGSYDGGGRGKEREKERDREKEREREKDKESGSRFSFEVDKAAETSS
PAAFSPEEGSAEAESATPIGRGKEANAKEAEWKDSHPSSPLPPSSGSDPAPPQSHGDKDA
PPKKVKARPPPLKRPFDSVDKVLSEVYFEERFAKLPEFRPEEVLPSPTLQSLATSPRAIL
GSYRRKRKNSTDLDSSTEDPISPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFERPGNTS
PPTTPSSFCSLYYPDSTALSGTDGEDVLGELEFDKVPYSSLRRTLDQRRALVMQLFQEHG
FFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSELAGTSDISSLPGPSGA
AAASDLAAGAEPQEKEAEREGEQNSSEEPRNAGDSQDSTR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcggaaagcccgcagtaccttcgccaaggactcagcatgtttgtgtggact
aatgttgagcccagatcggttccagtgtttccttggcattcattggtccctttcctggca
cccacccaatcagatccatcggctcaacctggtgagggccaacaaactgtcagtcatccg
caggcagcttctctgaagaaagaggctcagagtggatcagtgctgaaggagattatagag
ggagcacctaacccttcctcacggcccactccctccgctgatgaactgcccccagagaga
gagaaggatgcagagagagagaggcctgacagtgaaacagaaagtgacgtggatgatccg
tttttccccggtgttcttcctgatccgccaatttctgcgtctcctggaaagcgtagatct
cagtccctcagtgcactgcccaaagatgacaaaaccagtcctggaaagagggagaaagat
cacatccggaggcccatgaatgcgtttatgatcttcagcaagcggcatcgtgcgctggtt
catcagagacacccaaaccaggacaaccgcactgtcagcaagatacttggagagtggtgg
tatgctttgggacccaaagagaaacagaaataccatgacctcgcatttcaggtgaaggag
gcacactttaaggcacatcctgactggaaatggtgtaataaggacagaaagaaatccagc
agcgagggacgtggtgttccagggggcaaagacattcgtgagaggagcatgtcagaaacc
acagaacctccatctgtgtcaatgggaatggagctcaaaggtgtggggcctggcatggtg
agcgtgtcagagcgagtcggagctgagggacagggtcagttgccccgtcctcgtgccttc
tctcagagtgccatgcacaatctggagaggagcgagagaggcaatccacaggcactcgct
gagctcgcacagatgtgtggtgatggtggtcaggttgcaaggcggggtgctctctcccag
acacagaggggggtaagtgaggacatgacaagcgacgaagagcgtatggtcatctgtgaa
gaagagggggatgatgatgtcattgacgactcgtatccaggcagctccattgacctgaag
tgtaaggagagggtgacagacagtgatagtgaaaatggatctggagatgaaggagaacgc
aagagagtttttgctcctgtgatttgctcctcgtcttatggtcatggtcggagcgtatct
ctctcctcctaccccagctccagacgctttagcgatgcttcctcaaagagaaagcgagca
gtggagggaggtgatggagaaagaagggaaggtgaaggagcagtgtcccagccctctgcg
ggtcagtccatcctggtcagttctgctgggggagtgtcatcagtgctaggggcggtgaga
gtggcgtccactgttgtcactaatgtggtgcggcctgtggtcagcacgccggtgccgatc
gccagcaagtccccacatgaccggaaacccgctccgccacagacacagctttacattgga
cctggtaccacaggaaacccagcaacagcttcaggtggagggggtgggtactattcctca
tcatcacccaatcctgttagtgcatcaggagctcaaggggggctggtgaccaatctagtt
ttgggaggcacattccaagccccgcccggtgtacagcttgtcacaccccctcctccacaa
aacccagcctccccggcatcggcccctcttactcatagtaacggtccacttcctctgccc
gttctgcagtcacacattcttccctctgcctcaataacgccctcatcgggccaaaaaccc
ataacacaggttcagtacattatccctaccctctctgccaacaatcccaagagcccttcc
cctcaccaggccggtcagccaaccaatatcttcaccctacctacagctctgcccactcac
gcctcgttggccaacgggaagcagtcgggatacgtctccagtcctgctgtgggtgtagtt
agcccaggagccagagtgcaaacacagtcaccagtcttgcagggcaagatgctggttccc
atggcaacagtgagggctgctcctgccgcctctcagcagtttcccttggtagcccctcct
cttcctgttcagaatggaggacaagcaggaagcaaggtgagatctcaaatgatttttcag
attgcgccgatgcctgtcgtccagtcgcagcttccctctacaggaccagtgcagcctggg
agcccattttctgttactatgggaacagctactgtggtcgccccaggctctaccccgtct
cagaccgtgctgctaccgaccccacctacaagaatcacttatgtacagtccgctcctggg
gttccttctcctttgccattagttcccacgacaacagtctcatcctctcagacagcttca
gcaacacctggatctgcttatgttccatcacccttggcgacctttgcagcgatcgctcat
ccggggcagactttggtgcagccactgattgcaggtcagccatcactgttggccccggcc
cagtctcccagcgcccctcacgctcctgccatctccgctatctacacccctacaaatgtg
accctggcaactggggtggtgtctatggctacggtgtcacccagtgtggtgtacacagtg
tccagttcctcttgcctatctccacacatccttcctaaacacaccataatgacctccatg
acctctgtaacctcagacaggcaagggaacgtatccacacattctgagcgacagttgcac
caggaaagaacactggaccggcagcacacagacagtcaggtctacacgcaatcctctgag
agacagaccgagaagatctctctcttacagccggacaaacagttccagttcccaagtaaa
agcagcagcagttcagttgcaccctcaccgggcacctcagtgccactgcagcctggaagc
cctgctcaaacctctcattctggcagtgctccggggacaccgaaactgatcacgccaagg
cctcctcagaaagtgaaagccactgtggccaacatcccagtgggcagttatgatggagga
gggagaggcaaagagcgagaaaaggagagagacagggagaaagagagagagcgagagaag
gacaaagagagtggtagtcggttctcatttgaggtagacaaggcagccgagacgagctcc
cctgcagccttttcaccagaggaggggtccgcagaagcagagagtgctacacctattggc
cgtggcaaagaagcaaatgctaaggaggctgaatggaaggactcccacccttcttctcca
ttacctccttcctctggatcagatcctgctccgcctcagtctcatggtgataaagatgca
ccacctaaaaaagtcaaggctcggcccccaccactcaaacgaccgtttgattctgttgac
aaggtcctgtcagaagtgtactttgaggagcgctttgcaaagctgccagaattccgtcca
gaggaggttctgccttctccaaccctgcagagtctggccacctccccacgagccatactg
ggcagctaccgcaggaagaggaaaaactccaccgacctggactcatccacagaagatcca
atctctccaaaaaggaaaagccgccgcagatccagctgcagttcagagccaaacacacct
aaaagcgctgcaaagtgtgagggggacatttttacctttgaaaggccaggtaatacttca
ccacccacaacaccttcatcattctgcagcctatattatcctgattcaactgctttatct
ggtacagatggagaagatgttctgggggagctggagtttgataaggtgccctactcctct
ctcagaagaactcttgatcagaggagagctcttgtcatgcagctattccaggagcatggc
ttcttcccctcagctcaagctactgctgcgttccaggcgcgatacgctgatatcttcccc
actaaggtgtgtttacagcttaagatccgagaggtccggcaaaagatcatgcaaacggca
gctccgtcggagttggccggcacttcagatatatcctcattgccgggaccttctggggcg
gcggcagccagtgacctagctgcaggggcagagcctcaggaaaaagaggccgagcgggag
ggtgagcagaacagctcggaggagcccagaaatgctggcgattcacaggactccaccaga
tga
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