Cyprinus carpio (common carp): 109104707
Help
Entry
109104707 CDS
T05134
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109104707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109104707
03021 Transcription machinery [BR:
ccar03021
]
109104707
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109104707
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109104707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109104707
NCBI-ProteinID:
XP_042596497
UniProt:
A0A9R0AF76
LinkDB
All DBs
Position
B16:9340907..9398853
Genome browser
AA seq
682 aa
AA seq
DB search
MFVPLPVPFVLPRTASDLHAWRLKSPLALRSHSDIRMSKPIEVENPAADSPMESTDSERN
GSDSNNQVQPMKISPFSLSPTLSSSTKTKVEDCGEMSPAAVQTPPAQTPLPHTQLMLTGG
QLAGLTALLPAQQQLLLQQAQLLAAAVQQSHVAHAASQQQAQQQAAQPQSQGQSQSTQEQ
NAASVPPHPPHQLSLSQPIQLTAQDIQQLLQLQQLVLVPGHTLPSPAQFLLPQTQQGQQG
LLSTPNLIPLPQQNQGSLLAAPHRLSLQAQREKVAESSVNTVTTHPEEPSDLEELEQFAR
TFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLTDA
ETMSMDSTLPSPSALSSASLGYEGLPGRRRKKRTSIETNVRVALERSFISNQKPTSEEIL
FIAEKLNMEKEVIRVWFCNRRQKEKRINPSSATPPLPSQPQPTSHKPPCYSPHMMPSQGP
SQTVSRLGTPVTTMSSVCPLTPNGPSLSSAPSPVTPPPRSDASPAPPTHSTLSLNTGLWH
KKNGDVSNYINDFAAHLRNMVRGVNTGMNQALLGCNPLATIQALAATGGQLPISSLEGSS
KVLIGGSGGQGAGLPSSLFLNHSSLLPMATGTGMGLGSSALAKTSFPVTGGMSPSPCSSP
ISSCSSGDLLHSPHSIGGAKIE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctttgccggtgccgtttgtcttgccgagaactgcctctgatctccacgcc
tggcgcctcaagtccccgctggctctgcgctctcactccgatatcagaatgtcaaagcca
atagaggttgagaatccagcagcagactctccgatggagagcacagactcagaaagaaat
ggctcagattcaaataatcaggttcagccaatgaaaatcagccctttctctctttctccc
acactgagcagcagcaccaagactaaggtggaggattgtggtgagatgtctcccgctgct
gtacaaactccacctgctcagacgccccttccccacacacagctaatgctaacgggtggt
cagctcgcagggttgactgcacttttgccagcacagcaacagctgctcttacagcaggcg
cagctcctcgctgcagctgtgcagcagtcgcatgtggcccacgcggccagtcaacagcaa
gcccagcagcaggcagctcagccgcagtcacagggccaatcgcagagcacacaggaacaa
aacgccgcatctgtcccgccgcatcctcctcaccagctttctctttctcagccaatccag
ctcactgcgcaggacattcagcagttgttgcagctgcagcagttggtcctcgttccagga
cacactctgccttcacccgcacagtttcttttaccacaaacacagcaagggcagcaaggg
ctgctatcaacgccaaatctaattccactacctcagcaaaaccaaggaagcctgctggcc
gctccacacagacttagtctgcaagcacagagggagaaggttgcagagagcagcgtgaac
acggtgaccactcatcccgaagagcccagtgatctggaggaactggagcaatttgcccgc
acattcaaacagagaaggatcaaactgggcttcacacagggtgatgtgggattggccatg
gggaagctctatgggaacgatttcagtcagaccaccatctctcgttttgaggcgctcaat
ctcagcttcaaaaacatgtgcaaacttaaacctctgttggagaagtggctgactgacgca
gaaacaatgtcgatggacagcaccttgccaagtcccagtgctctttcctctgcctcgctg
gggtacgagggcctgcctggccgccgtaggaagaaacgcaccagcattgagaccaacgtc
cgtgtcgctctggaacgcagcttcatctcgaaccagaagcctacctcagaggagatcctg
ttcatcgctgaaaagctcaacatggagaaggaggtgatccgcgtctggttctgcaaccgc
cggcagaaagagaaacgtattaacccctccagtgccacccctcccttgcccagccaaccc
cagcccacctcgcacaaacccccctgctacagcccgcacatgatgcccagtcagggacca
tcgcagacagtgagccgtctcggtacaccagtgaccactatgtcatcagtttgccctttg
accccaaatggaccctccttaagctctgcaccatctcctgtgaccccgcctccccgcagt
gatgccagccccgcccctccgactcacagtacactaagtctgaacacaggtttatggcat
aaaaagaatggtgacgtttctaactacatcaatgactttgctgcacatttgaggaatatg
gtgaggggagttaacacaggaatgaaccaagctcttcttggctgcaacccacttgctact
atccaagctctagcagccactggtggccagctgcccatttccagtcttgagggaagcagc
aaggtgttaattggtggttctggaggccaaggagcaggtctcccctcttccctctttctc
aaccactcctctttgttgcccatggcaacaggcaccggcatgggattgggcagttcagct
cttgccaaaacctcatttcctgtcacaggcggcatgagtccctccccttgctcaagcccc
atctcttcctgctcttctggcgatttgctacacagcccacactcgattggaggggctaaa
atcgagtga
DBGET
integrated database retrieval system
