Cyprinus carpio (common carp): 109104930
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Entry
109104930 CDS
T05134
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109104930
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
Other 90S particles
109104930
Pre-60S particles
Other pre-60S particles
109104930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
DUF6031
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
109104930
NCBI-ProteinID:
XP_042625073
Ensembl:
ENSCCRG00000017718
UniProt:
A0A8C1LPL9
LinkDB
All DBs
Position
A13:complement(18042091..18052392)
Genome browser
AA seq
1283 aa
AA seq
DB search
MVKSGKLRSGTSQKIKRWKKGHSSDSNPETSRYRKAARSRYFSRPLEKSDLTVDALKLHN
ELQAGSLQKSSDAMQAGDVMEDQALTEKTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHK
EICAVLAAVTEVIRSQGGMETETEYFASLMTTLEAVDSSESLAAVAYLLNLVMKRLPAAV
LKKKFSDTAKAFMDVMTNQVNSDSSSCLRWIISCLATLLRKQDLSVWSYPSTLQLYHGLL
SFTVHSKPKVRKAAQQGVCSVLRYSDFVFSDNAPVHHPAAAATAKFCCKELEQSGGSKED
TTTLHVIGLLKDLLSAFPLSSVKSCCETLLRLMTLSHVLVTANAMQAFHKLFSSKPSPAS
MSAELNAQIITALYDYVPSENDLQPLLAWLAVMEKAHVHLSSLQSSLSISHLPRLFSVTM
SCLLSPHTQVVSTATQTLKTLLNECVAPHMAEIGPVLPSTSAGNGACILKMFRIVEEGLS
YRFHASWPFVLQILGCFYRAAGRQAHPIMIKSLQSLCDLRATPQFPFSGELDLAVGGAVE
NMGPEVVLKAVPLLITGTDDDLEFPRSWLIPVIRDHVKNTQLAYFTSYFFPLANNLKQTG
DELEQSGQKLMAKVYQTLQMQIWTMLPGFCTKPTDLLASFKGIARSLGMALNDRPDLRLC
ICQALRTLINKSCDTEEEKAELKRFSKNFLPILFNVYNQQPKPGEMVSARMAVLDTIRVY
LSITEQEMVCTFLQKASERLNSADNSEFTRLAVIDLIVAMAPFVDEASMTQTFSLLKPFV
ASKVASIQKKAYRVIEEICGGESASCKAFVLQNLEELKTMLIDSLTTAASSSKRPRLKCL
IHIVKQLNEEHRGFITALLPEVILCTKEMSIGARKNAYSLLVEIGNAFVRFCGNTKDAIN
EYLGHVYIGLTGSVTMITCAVLALTRLVFHYKDTIDVSSLELLLQNVCLLLSSRTRDIVK
ASLGFLKVLLFSLDVKVLASHITVIMEGISNMNDMRRHFRSKLKSIYTKMIRKFGVELVK
SMLPADQHKVLVNIRKTEARNKRRKLVSKTEEDGSDTEDETPKMKGESIEDILAETDSDS
NEDEKPRKGQKKPVRKGQAWLKEGISDEPLNFLDPKAAQRVLATNPNLKKASKAEHGFKV
TSDGRLIIKEEDDEDDDNTKDAEMDDILEEAGVKTKKNPKRKMRDELDDDMDVEPTMKYK
AGGIGIHRPLDRRPEFGTEYKSKKGKGDVKKAGKCDPYAYIPLKKAQLNRRKKAKLQGQF
KGMVRGAKKGALSGSRILKKRKA
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtccggaaaacttcgatccggaacatcccagaaaatcaagcgatggaagaaa
ggtcacagtagtgacagcaatccagagacaagtcgctatcgaaaggccgcgagaagccga
tatttcagccgtcccttagaaaaaagtgatctgacagtagatgctttgaaactccacaat
gagcttcaggcaggatctctgcagaaaagcagtgatgccatgcaagcaggagatgtcatg
gaggatcaagccctgacagagaaaacctctgggacttttcttagtggactgtcagactgc
tccaacctcacttttagaaaagtacagcgctactgggagtcgaactctgcggcacataaa
gagatctgtgctgtattggcagctgtaactgaagtgatccgctctcagggaggaatggag
acagagacagagtactttgcatccttgatgacaacactcgaagctgtagatagcagcgaa
tctctggcagctgttgcctacctcctaaacctggtcatgaaaaggttgcctgctgcagtg
cttaagaaaaagttctcagacacggccaaggccttcatggatgtcatgacaaaccaagtc
aattctgactcttcgtcctgcctgcgatggatcatatcctgtctagcaactttgctgcgt
aaacaggatctgtcagtctggagttacccttcaactctgcagctgtaccacggtcttttg
agcttcaccgtgcactccaaaccaaaggtgcgaaaagcagcacagcagggtgtttgctca
gtccttcgctacagcgactttgtgttctcagataatgccccggtccatcacccagcagca
gccgcaacagccaaattctgctgcaaagaattggagcagtccggaggcagcaaagaagac
actaccactctccatgtgattggtcttctaaaagacctgctgtctgcttttcctctgagc
tctgtaaaatcttgctgtgagacccttctccgtctgatgaccctgagccatgtgctggta
acagcaaatgcaatgcaggctttccacaagctcttcagtagcaagcctagtcctgccagt
atgtctgcagaactgaatgcacagatcatcacagctttatatgactatgttccaagtgag
aacgatctgcagcctttactagcatggcttgctgtaatggaaaaagcccatgttcatctt
tccagtttacagagctctctgagtatcagtcatcttcctcgcctcttctctgtcaccatg
tcatgtcttctgtccccacacacacaagtagtctctactgcgactcagactctgaagact
ttgttaaatgagtgtgtggctccacatatggctgagatcggtccagttttaccaagcaca
tcagctggaaatggggcttgcatcctaaagatgtttcgtatcgtggaggaagggttgtcc
tatcgttttcatgcctcttggccgtttgtgctgcagatcctgggctgtttctacagagct
gcaggaagacaggctcatcctattatgataaagagtctgcagtctctctgtgacctgcga
gccacccctcagttccccttctctggggagctggatctggctgtgggcggtgcggtggag
aacatgggtccagaggtggtcctgaaagctgtgcccctcctcatcactggaacagatgat
gacctggagttcccacgtagctggctgatcccggtcataagagatcatgtgaaaaacact
cagctggcttacttcacctcatactttttccctttggcaaacaatcttaaacagacaggt
gatgaactggagcagtcaggacagaaactgatggcaaaagtgtatcagactctacagatg
cagatttggaccatgctacctggattctgcactaaacccactgacctgttagcctcgttt
aagggcattgctcggtctctgggtatggccctgaatgatcgccctgatctccgtctgtgc
atctgccaggctttgcggactcttatcaacaagagctgtgacacagaggaggaaaaggca
gaattaaaacgattttccaagaacttccttcccatcctatttaatgtctacaatcagcag
ccaaaacctggagagatggtatctgctagaatggctgtcctggacacaatcagagtctac
ctgagcattacagaacaggagatggtttgcacgtttctgcagaaagcatcagagagactc
aacagtgcagacaactctgagttcacacggcttgcagttatcgacttgattgttgcaatg
gctccatttgtagacgaagcatccatgacccagacgttcagtttgcttaaaccttttgtt
gcgagcaaggttgctagcatccagaagaaagcttaccgtgtgattgaagaaatttgtgga
ggagagagtgcgtcttgtaaggcttttgttctgcagaaccttgaggagctgaaaacaatg
ttaattgacagcctgacaacagcggcctcgtcttccaaacggcctagactcaagtgtcta
attcacatagtgaagcagctgaatgaagaacaccgtggttttattacagctctgcttcct
gaggtcattctttgcactaaggaaatgtctattggtgcccgcaaaaatgcctactctctt
ctagttgagatcggaaatgcatttgtaaggttttgtgggaacacaaaagatgccataaat
gagtatttaggccatgtgtacattgggctaactggctctgtgacgatgatcacctgtgca
gttctggcattaacaagactagtgttccattacaaagataccatagatgtgtcatcattg
gagctgctgctgcaaaatgtgtgtcttctgctttcgagcaggacacgagacatcgtcaaa
gcctctctgggtttcctaaaagtcttgctcttttctcttgatgtcaaggttttagccagc
catattactgttattatggagggcatcagcaatatgaatgatatgcgaagacattttagg
tcgaaacttaagagcatttacactaagatgattaggaaatttggggtggagctggtcaaa
agcatgttgccagctgatcaacacaaggtcctagtgaacatccgtaaaacagaggccaga
aataagagacgcaaactcgtgagcaagacagaagaggacggctcagacaccgaggatgag
acacctaaaatgaaaggagagagtattgaggacattctggctgagacggactctgactcg
aatgaagatgaaaagcctagaaagggtcagaagaagccagtgagaaagggccaggcctgg
ttaaaggaaggcatatctgacgaaccactcaacttccttgatccaaaagcagcgcagaga
gttttggccaccaaccctaatctaaagaaggccagcaaagcagagcatggattcaaggtg
acatctgatggaagattgatcatcaaagaagaggacgatgaggatgatgataatacaaaa
gatgctgaaatggatgatatacttgaagaggctggagtcaaaactaagaagaatccaaag
aggaaaatgcgtgacgaactagatgatgatatggatgtggaacctacgatgaaatataaa
gctggtggcattggaatccacaggcctctggatagaagaccagagtttgggaccgagtat
aaatctaagaagggaaaaggtgatgttaagaaggcaggcaagtgtgacccatatgcttat
ataccactgaagaaggcccagctcaaccgcaggaaaaaggccaaactccaaggccagttc
aagggcatggtcagaggggccaagaaaggagcactctctggatcaagaatactgaagaag
aggaaagcctaa
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integrated database retrieval system