Cyprinus carpio (common carp): 109105239
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Entry
109105239 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109105239
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
Others
109105239
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
109105239
NCBI-ProteinID:
XP_042617638
Ensembl:
ENSCCRG00000028769
UniProt:
A0A9Q9YCE8
LinkDB
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Position
A1:complement(30018230..30171127)
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AA seq
1185 aa
AA seq
DB search
MERGIRYCRVNVFCTLLLILFAWVPVTKTVITCRSCHLLDKWSRRELLVRMDSGVDFGKV
GDKNGDGSTALFNSAGAETGQPDCGATDNCEHTHTLRKKKTHTLLPXKKMPLDDKRKSMR
SYGKVYSLKRPGSQGSAPGEPHHRVRRSTHGPGSPPSARSLPAFGNSTARSARRVPRSDL
RWNREERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGS
VTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDE
GATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWS
KLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQ
VSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVS
EAGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKGRDW
RLLQAPSADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIASRELAPGIIVASGSIGAEL
TSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWN
KYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVPW
DLHDQGERCLMGVKRVYRKLKPIARCVMGKTYSVTMISEPCDCTESDFECDYGFERRADG
KCTPAFWFLPSSMSRTCTTEHTFLNSTGYRKVVSNNCTRGVMEQFTARRQPCPSRAPRGL
HLVTSEGKLTATTASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYK
NVGIYRVSATAENTLGSETVLLFLHITCQLESIHLSAPFVAVKNKEVNLTVVLSPSQVGT
VTYNCLLXRLPHRPVITLEGSVAFTFSREGISVVTVQVSAGNNILQDRKTIAVHEYFRSH
LLAFSSNLDDHNPDVAEWRLDVSRVIKTSMVQATGVNSDQLLVTVLPGLPTVAEFFLLPD
KQLTEGKPEKTATHLDQLSELVLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENH
SGSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHMSAPMFFENKSKR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaatcagatattgccgggttaatgttttctgcaccctgcttttgattttg
ttcgcttgggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctgctggat
aagtggagcaggcgggaattattggtgaggatggacagtggtgtcgattttggtaaagtt
ggtgataaaaatggagacgggtcaacggcgctgtttaattcggctggtgctgaaactggt
caacccgactgcggcgcaaccgacaactgcgaacacactcacactctgcgcaaaaaaaaa
acacacacactactcccataaaaaaaaatgccactcgatgataaacggaagtcgatgcgc
agttatggcaaagtttatagcctcaaacgtccaggttcacaaggttcagcccctggagag
ccccatcaccgagtgcgtagaagcacccacggacccggctcgcccccaagtgcgcggtcg
ctgccggcttttggaaacagcaccgcgcggtctgcgcgcagagtcccccgctctgatctg
agatggaacagggaagagcggagaacggccacatcgcgacaggaggagctgaaacttacc
agctctacctttgcgctgacaggggattccgctcacaaccaagccatggtgcactggtcc
ggccaaaacagcagcgtgattctcatgctgaccaaactatatgacttcaatctgggcagt
gtcacagaaagctccttatggaggtcaacagattacggaaccacttacgagaaactcaat
gaaaaggtgggagtaaagaccatcctcagctatctgtacgtcagccccaacaacaagcgc
aagatcatgctgctgacagatccagaggtggagagcagtttgctcatcagctcagatgaa
ggcgccacttatcaaaaatatcgcctcaacttctacatccttagcctgctgtttcaccct
gagcaggaggactggatccttgcctatggccatgaccagaagctctacagctctgttgag
ttcggccgtcgatggcagctcgttcacgagcgggtggcacccaatcgattctactggtct
aaactgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagaaacc
caggctctttatgtcacatgcaagcttcagaactgcacagatgccaacaaaggcaaacct
tttcctggatacatcgaccccaactccctggtggtccaagatgagtatgtgtttgtccag
gtgtcaactggtggccggccaatctactacgtgtcatccaggcgagatgtgtttacaccc
atgaagcttcccaaatacacccttccaaaggatctgcatgtgattagtacagatgagaac
cgggtcgtggcggcagttcaagagtggaaccagaatgacacttacaacctgtatgtgtca
gaggccggaggcatttactacacgctggctttggagaatgtcatgagcagtatgggacca
gagggaaatgtcatgatagatctatatgaggtggcaggaataaaaggcatgttcttggcc
aataagaagctaaataatgaggtgaagacatacataacctataacaaaggccgcgactgg
aggctcctgcaggctccctcagctgatctcagaggaaaccgaatccattgcatgctgcca
tactgttctctgcatcttcacctgcacgtatctgcaaacccatacacatctggaaatata
gccagcagagagttggcccctggaatcatagtggcatcaggttcaatcggcgcagagtta
acgagcagcaacgttagcatgttcatcacatccgacgctggaaacacgtggcggcagata
tttgatgaagagtacagtgtgctgtatctggatcaaggtggagctttagtggcaattaga
cacacccctcttcccatcaggcacctctggttgagctttgatgaagggagggtgtggaac
aaatacagtttcacttcatcacccctgttcgtggacggtgtcttgggcgaaccgggcgag
gaaacgcttataatgacgatcttcggtcatgtcagtcaccgctcagaatggcagctggta
aagatagacttcaggtctatctttaacagaagatgcatcgagtctgactatgtgccgtgg
gatttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtctaccgaaagcta
aagcccatagcaaggtgtgttatgggtaaaacctactctgtcacgatgatatccgagcca
tgtgactgcactgagtcggactttgagtgtgattatggcttcgagagaagggctgatggg
aaatgtactccagcattctggttcctgccctcctccatgtctcggacctgtactacagaa
cacacattcctcaacagcactgggtacagaaaggtggtttctaataactgcaccagaggg
gtgatggaacagttcacggctcgtaggcagccgtgccctagtcgggcccctcgcggcctt
cacttagtaaccagcgaagggaagctaacggctactactgccagcaacgtcacctttctc
gtcttcctggaggagggtgatggatcgaaaaccagcatcacagtggattttggcgacgga
aatgctttcacctactccaacgtgagctctatcgaggatggcattaaacacatctacaag
aacgtgggaatctaccgagtgtcagccacggccgagaacactctgggctcggaaacggtg
ctcctcttcctacacattacgtgtcaactggagtctattcatctctccgctccttttgta
gctgtgaaaaataaagaagtcaatctgacggtggttctctcaccaagccaagtgggaacg
gtcacctataactgcttactctagagattgcctcacagacccgtgatcacgctggagggg
agtgtggcgttcacgttctctcgagagggaatcagtgttgtcaccgtacaggtgtccgct
gggaataacatcctgcaagacaggaaaaccatcgctgtccacgaatacttcagatctcat
cttcttgccttttcatctaatctggatgatcacaaccctgatgtggctgaatggaggctg
gatgtgagtcgagtcattaaaacctctatggtgcaggcgacaggagtgaattcagaccag
ctgttggtcactgtgttgcctggactgccaacagtggccgagttctttctgttaccagac
aaacagctgacagaagggaaaccagaaaaaacagctacccatttagaccagctctcagaa
ctggttctcagtgctctgaatcagaatctggttcagttcacactcagaccaggagtccag
gtcacagtatacgctgcccatttatcagcagcgcctctagtggacacaagcgagaatcac
agtggctcagctatgctcatgctcctttctgtggtggtggtgggtttagctgtgttcctc
atctataaattcaaaaggaagatcccaggcctccacatgtctgcaccgatgttttttgaa
aataagagtaagagatga
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