Cyprinus carpio (common carp): 109105249
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Entry
109105249 CDS
T05134
Name
(RefSeq) LIM domain-containing protein 1-like
KO
K16682
LIM domain-containing protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109105249
03036 Chromosome and associated proteins [BR:
ccar03036
]
109105249
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109105249
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
109105249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
109105249
NCBI-ProteinID:
XP_042627864
UniProt:
A0A9R0B9Y5
LinkDB
All DBs
Position
A16:complement(216952..235812)
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AA seq
442 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVKRDAGNNPDFEETRKVFASKMTKIHLQKQ
QEEMTRNSLAARINGSHSKVSDNTFYTKDRPPINSYRQGGEAAAKPPIMSGPVVGPASVT
PYISYEGQKHHSASLPDGSSDRAIKETGNAVNQIPVPARSAPSTSPPGTWASRSGNPSQT
PSSPFSNSSSSSSSPGAGQNYSPVSQGFPQTGRSPSQSPTGTYRDAYHQPQQVSPGQHCQ
PNSANGPTYQNGGAHNIGTPSPTQVTQPPLSHGVKQGEPSQPKSPAPSNPTVPASTPVES
PHDESSSPSRALKLPCQTLHVQADQGPSVAEIKLEALTERLEKEMDAQPKAEYFGSCVKC
SKAVYGASQACQAMGSLYHDSCFTCSACSRKLRGKAFYYVCGKVFCEEDFLYSGFQQSAD
KCNVCGHLIMDMVSLMDLHTLH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttgggacttgaggcgagtaaattcatcgaggacttgaacatg
tatgaagcatcgaaggatggcttatttcgcgtgaagagagatgcgggaaacaacccggat
tttgaagaaaccaggaaggtttttgcctcaaagatgaccaaaatacacttgcagaagcag
caagaggagatgacaagaaacagtctggcggcaaggatcaatggaagtcattcgaaagtg
tcagataacacattttacaccaaagacagaccacccatcaatagttatagacagggtggt
gaagcagcagccaaaccacccatcatgtctggaccagtggttggccccgccagtgtgact
ccatacatatcttatgaaggacaaaagcatcattcagccagcttacctgatggatccagt
gacagagctattaaggagactgggaatgctgttaaccaaataccagtgccagcacgatcg
gcaccctctaccagcccccccggcacatgggcgtcaagaagcggcaacccgtctcagacg
ccatcatctcctttctcgaacagttcctcctcttctagctcacctggagcgggtcagaat
tattctccagtgtctcagggattccctcaaacagggaggtctccctctcagtcgcccaca
ggaacgtacagggatgcatatcaccagcctcaacaggttagccctgggcagcactgccaa
ccaaactctgccaatggaccgacatatcaaaatgggggagctcataatattggcaccccc
tcacctacccaggtgacccaacctccattgtctcatggagtgaagcaaggtgagccatcc
caacccaagagccctgctcccagtaacccgacagtgcccgcttctacccctgttgagtcg
ccccatgatgagtcttccagcccttctcgggcactcaagctgccatgccagaccctccat
gtacaggcagatcaggggccatcagtggctgaaataaaattagaagctctaactgaacgc
ctggaaaaggagatggatgcccagccaaaggctgagtactttggcagctgtgtgaagtgc
agcaaggctgtgtatggagcgagtcaggcgtgtcaggccatgggcagcctgtaccatgac
agctgcttcacctgcagcgcttgcagtcgaaagctcagagggaaagccttttactacgtt
tgtgggaaagtgttttgtgaagaggacttcctgtactctgggttccagcagtctgccgac
aaatgcaacgtatgcggacatttaatcatggacatggtgagtctgatggacctccacacc
ctgcattag
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