Cyprinus carpio (common carp): 109105300
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Entry
109105300 CDS
T05134
Name
(RefSeq) estrogen receptor beta-1
KO
K08551
estrogen receptor beta
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109105300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109105300
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109105300
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
109105300
Nuclear receptors [BR:
ccar03310
]
3. Estrogen like
3A. Estrogen receptor
109105300
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Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109105300
NCBI-ProteinID:
XP_042602436
UniProt:
A0A9R0AN02
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Position
B20:13005833..13019778
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AA seq
544 aa
AA seq
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MSVYPEGDSPLLQLQEVDSSRVGGHVLSPAFNSSSPSLPVESHPICIPSPYTDLSHDFTT
LPFYSPALLGYGAAPLSDCPSVRQSLSPSLFWPPHSHVSSVALHQQQTRLQQNHPTGGSW
AELTPHDHSEEENCKPLAKRVADAEETSASLRGKADMHYCAVCSDYASGYHYGVWSCEGC
KAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGLRRDRGSYQQR
GARQKRLARFSGRMRTCGPRSQEIKSVPRPLGGNKVVSIALSPEELIARIMDAEPPEIYL
MNDVKKPFTEANIMMSLTNLADKELVHMISWAKKIPGFVELSLFDQVHLLECCWLEVLML
GLMWRSVNHPGKLIFSPDLSLSRDEGSCVQGFVEIFDMLLAATSRFRELKLQREEYVCLK
AMILLNSNMCLSSSEGGEELQSRSKLLCLLDSVTDALVWAISKTGLSFQQRSTRLAHLLM
LLSHIRHLSNKGMDHLHCMKMKKMVPLYDLLLEMLDAHIMHSSRLSHSAPRAAPSSQHGG
TLGT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtatcctgagggagacagtcctctacttcagctgcaggaagtggactccagc
agggttggaggtcatgtcctctctcctgcctttaactcctcttctccatctctgccggtg
gagagccaccccatctgcatcccatcaccctacacagacctcagccatgacttcaccact
ctgcccttctacagtcccgctctgctgggttacggcgcagcgcctctgtccgactgccca
tcggtgaggcagtcgctaagcccctccctcttttggccacctcatagccacgtttcctca
gttgcattgcatcagcaacagactcgactacaacaaaaccatccaactggtgggagttgg
gcagaacttacgccacatgatcacagcgaagaggaaaactgcaaacctctggcgaagagg
gtagcagatgcagaggagacttctgcctctttgagaggtaaagctgacatgcactactgc
gccgtctgtagcgattatgcctctgggtatcattatggagtgtggtcatgtgaaggatgc
aaagccttcttcaagagaagtatacaaggacacaatgactacatctgccctgccaccaac
cagtgcaccattgacaagaaccgccgcaaaagctgccaggcctgccgtctgcgaaaatgt
tatgaagttggaatgatgaaatgtgggttacggcgagatcgtggcagctaccaacaaaga
ggagcacggcagaagcgattggcgcggttctctggcaggatgagaacatgtggcccaaga
tcccaagaaatcaaaagtgtcccacgtcccctcggtggaaataaggtggttagcatagca
ttgagccctgaggaactaatcgctcgaatcatggatgcagagccacccgagatttatctc
atgaatgacgtgaagaagccattcactgaggccaacatcatgatgtcactgaccaacctg
gctgacaaagagctcgttcacatgatcagctgggccaagaagatcccaggttttgtggag
ctcagtctttttgaccaggtccatttgttggagtgctgctggttagaggtgctgatgctg
ggactgatgtggcgatccgttaatcaccctggaaagctcattttctccccagacctcagt
ctcagcagggatgaaggcagctgtgtgcaggggtttgtggagatctttgatatgctgctg
gcagccacgtccaggttcagagaactgaagttacagagagaggagtatgtgtgtctcaaa
gccatgatcctgctcaactccaacatgtgcctgagttcgtcggagggaggagaggagctg
cagagccggtcgaagctgctgtgtctgctggactcggtgacggatgctctggtgtgggcc
atctctaagacaggcctgagcttccagcagcgctccaccagacttgctcatctgctcatg
ctgctctcccacataaggcacctcagtaacaaaggcatggaccacctccactgcatgaag
atgaagaagatggttcctctgtatgacctgcttctggagatgctggacgctcatatcatg
cacagctcccgtttgtctcactccgcccctcgagcggctcccagttcccagcatggaggg
accttaggaacctaa
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